RNA–Protein interactions for RNA: ENST00000394104.6

GAPVD1-206, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2 BASIC

Gene GAPVD1, Length 6,737 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-206ENST00000394104 PDILTQ8N807 584 aa6.93□□□□□ -1.3
GAPVD1-206ENST00000394104 CAGE1Q8TC20 777 aa6.93□□□□□ -1.3
GAPVD1-206ENST00000394104 ARHGAP35Q9NRY4 1499 aa6.92□□□□□ -1.3
GAPVD1-206ENST00000394104 IFT57Q9NWB7 429 aa6.92□□□□□ -1.3
GAPVD1-206ENST00000394104 CDR1P51861 262 aa6.92□□□□□ -1.3
GAPVD1-206ENST00000394104 KLHL34Q8N239 644 aa6.92□□□□□ -1.3
GAPVD1-206ENST00000394104 EEA1Q15075 1411 aa6.92□□□□□ -1.3
GAPVD1-206ENST00000394104 CPLX1O14810 134 aa6.92□□□□□ -1.3
GAPVD1-206ENST00000394104 MNS1Q8NEH6 495 aa6.92□□□□□ -1.3
GAPVD1-206ENST00000394104 DHX37Q8IY37 1157 aaKnown RBP6.92□□□□□ -1.3
GAPVD1-206ENST00000394104 ERICH2A1L162 156 aa6.92□□□□□ -1.3
GAPVD1-206ENST00000394104 FAM161AQ3B820 660 aa6.92□□□□□ -1.3
GAPVD1-206ENST00000394104 MTMR7Q9Y216 660 aa6.91□□□□□ -1.3
GAPVD1-206ENST00000394104 CHMP4CQ96CF2 233 aa6.91□□□□□ -1.3
GAPVD1-206ENST00000394104 CRBNQ96SW2 442 aa6.91□□□□□ -1.3
GAPVD1-206ENST00000394104 VPS37CA5D8V6 355 aaPredicted RBP6.91□□□□□ -1.3
GAPVD1-206ENST00000394104 CPLX2Q6PUV4 134 aaKnown RBP6.91□□□□□ -1.3
GAPVD1-206ENST00000394104 IFIT2P09913 472 aaKnown RBP6.91□□□□□ -1.3
GAPVD1-206ENST00000394104 ACBD3Q9H3P7 528 aa6.91□□□□□ -1.3
GAPVD1-206ENST00000394104 C9orf78Q9NZ63 289 aaPredicted RBP6.91□□□□□ -1.3
GAPVD1-206ENST00000394104 CENPQQ7L2Z9 268 aaPredicted RBP6.9□□□□□ -1.3
GAPVD1-206ENST00000394104 RUFY2Q8WXA3 655 aa6.9□□□□□ -1.3
GAPVD1-206ENST00000394104 SYTL4Q96C24 671 aaPredicted RBP6.9□□□□□ -1.3
GAPVD1-206ENST00000394104 EID1Q9Y6B2 187 aa6.9□□□□□ -1.3
GAPVD1-206ENST00000394104 WRNQ14191 1432 aaPredicted RBP eCLIP6.9□□□□□ -1.37e-6■■■■■ 39.7
GAPVD1-206ENST00000394104 PDE4AP27815 886 aa6.9□□□□□ -1.3
GAPVD1-206ENST00000394104 LRRFIP1Q32MZ4 808 aaKnown RBP6.9□□□□□ -1.3
GAPVD1-206ENST00000394104 ARGLU1Q9NWB6 273 aaPredicted RBP6.9□□□□□ -1.3
GAPVD1-206ENST00000394104 H0YHG0 523 aa6.9□□□□□ -1.31
GAPVD1-206ENST00000394104 TRDNQ13061 729 aa6.9□□□□□ -1.31
GAPVD1-206ENST00000394104 CCDC191Q8NCU4 936 aa6.9□□□□□ -1.31
GAPVD1-206ENST00000394104 TNIKQ9UKE5 1360 aa6.9□□□□□ -1.31
GAPVD1-206ENST00000394104 RDXP35241 583 aaKnown RBP6.89□□□□□ -1.31
GAPVD1-206ENST00000394104 TMEM132AQ24JP5 1023 aa6.89□□□□□ -1.31
GAPVD1-206ENST00000394104 MEX3CQ5U5Q3 659 aaKnown RBP6.89□□□□□ -1.31
GAPVD1-206ENST00000394104 MPHOSPH9Q99550 1183 aa6.89□□□□□ -1.31
GAPVD1-206ENST00000394104 ZKSCAN1P17029 563 aaPredicted RBP6.89□□□□□ -1.31
GAPVD1-206ENST00000394104 HSP90B2PQ58FF3 399 aa6.89□□□□□ -1.31
GAPVD1-206ENST00000394104 TTC5Q8N0Z6 440 aa6.89□□□□□ -1.31
GAPVD1-206ENST00000394104 OLFM4Q6UX06 510 aa6.89□□□□□ -1.31
GAPVD1-206ENST00000394104 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.89□□□□□ -1.31
GAPVD1-206ENST00000394104 NUP155O75694 1391 aa6.89□□□□□ -1.31
GAPVD1-206ENST00000394104 CCDC27Q2M243 656 aa6.89□□□□□ -1.31
GAPVD1-206ENST00000394104 TRAK1Q9UPV9 953 aa6.89□□□□□ -1.31
GAPVD1-206ENST00000394104 SMC3Q9UQE7 1217 aa6.89□□□□□ -1.31
GAPVD1-206ENST00000394104 R3HCC1Q9Y3T6 440 aaKnown RBP6.89□□□□□ -1.31
GAPVD1-206ENST00000394104 FHAD1B1AJZ9 1412 aa6.89□□□□□ -1.31
GAPVD1-206ENST00000394104 EXOC6Q8TAG9 804 aa6.88□□□□□ -1.31
GAPVD1-206ENST00000394104 NEXNQ0ZGT2 675 aa6.88□□□□□ -1.31
GAPVD1-206ENST00000394104 DCTN1Q14203 1278 aa6.88□□□□□ -1.31
GAPVD1-206ENST00000394104 CCDC173Q0VFZ6 552 aa6.88□□□□□ -1.31
GAPVD1-206ENST00000394104 PAF1Q8N7H5 531 aa6.88□□□□□ -1.31
GAPVD1-206ENST00000394104 COG6Q9Y2V7 657 aa6.88□□□□□ -1.31
GAPVD1-206ENST00000394104 OFD1O75665 1012 aa6.87□□□□□ -1.31
GAPVD1-206ENST00000394104 ZKSCAN2Q63HK3 967 aa6.87□□□□□ -1.31
GAPVD1-206ENST00000394104 HSP90AB3PQ58FF7 597 aa6.87□□□□□ -1.31
GAPVD1-206ENST00000394104 ANKRD62A6NC57 917 aa6.87□□□□□ -1.31
GAPVD1-206ENST00000394104 SAFBQ15424 915 aaKnown RBP eCLIP6.87□□□□□ -1.31
GAPVD1-206ENST00000394104 CGNL1Q0VF96 1302 aa6.87□□□□□ -1.31
GAPVD1-206ENST00000394104 NEFHP12036 1026 aa6.87□□□□□ -1.31
GAPVD1-206ENST00000394104 TEFQ10587 303 aa6.87□□□□□ -1.31
GAPVD1-206ENST00000394104 RNF20Q5VTR2 975 aa6.87□□□□□ -1.31
GAPVD1-206ENST00000394104 FAM43AQ8N2R8 423 aa6.87□□□□□ -1.31
GAPVD1-206ENST00000394104 REC8O95072 547 aa6.87□□□□□ -1.31
GAPVD1-206ENST00000394104 IKQ13123 557 aaPredicted RBP6.87□□□□□ -1.31
GAPVD1-206ENST00000394104 CCDC73Q6ZRK6 1079 aa6.87□□□□□ -1.31
GAPVD1-206ENST00000394104 RBM33Q96EV2 1170 aaKnown RBP6.86□□□□□ -1.31
GAPVD1-206ENST00000394104 COG3Q96JB2 828 aa6.86□□□□□ -1.31
GAPVD1-206ENST00000394104 CWC15Q9P013 229 aaKnown RBP6.86□□□□□ -1.31
GAPVD1-206ENST00000394104 BRPF1P55201 1214 aaPredicted RBP6.86□□□□□ -1.31
GAPVD1-206ENST00000394104 G3BP1Q13283 466 aaKnown RBP eCLIP6.86□□□□□ -1.31
GAPVD1-206ENST00000394104 MYO6Q9UM54 1294 aa6.86□□□□□ -1.31
GAPVD1-206ENST00000394104 KIF15Q9NS87 1388 aa6.86□□□□□ -1.31
GAPVD1-206ENST00000394104 KIF3BO15066 747 aa6.86□□□□□ -1.31
GAPVD1-206ENST00000394104 SMC2O95347 1197 aa6.86□□□□□ -1.31
GAPVD1-206ENST00000394104 TSPYL1Q9H0U9 437 aa6.86□□□□□ -1.31
GAPVD1-206ENST00000394104 BRMS1Q9HCU9 246 aa6.86□□□□□ -1.31
GAPVD1-206ENST00000394104 RRP1P56182 461 aaKnown RBP6.86□□□□□ -1.31
GAPVD1-206ENST00000394104 PANK3Q9H999 370 aa6.86□□□□□ -1.31
GAPVD1-206ENST00000394104 HNRNPMP52272 730 aaKnown RBP eCLIP6.85□□□□□ -1.316e-13■■■■■ 43.1
GAPVD1-206ENST00000394104 WASHC4Q2M389 1173 aa6.85□□□□□ -1.31
GAPVD1-206ENST00000394104 PDE3BQ13370 1112 aa6.85□□□□□ -1.31
GAPVD1-206ENST00000394104 WWC2Q6AWC2 1192 aa6.85□□□□□ -1.31
GAPVD1-206ENST00000394104 NAT10Q9H0A0 1025 aaKnown RBP6.85□□□□□ -1.31
GAPVD1-206ENST00000394104 NLRP13Q86W25 1043 aa6.85□□□□□ -1.31
GAPVD1-206ENST00000394104 NEUROD6Q96NK8 337 aa6.85□□□□□ -1.31
GAPVD1-206ENST00000394104 CCDC39Q9UFE4 941 aa6.85□□□□□ -1.31
GAPVD1-206ENST00000394104 ERCC4Q92889 916 aaPredicted RBP6.85□□□□□ -1.31
GAPVD1-206ENST00000394104 MYBBP1AQ9BQG0 1328 aaKnown RBP6.85□□□□□ -1.31
GAPVD1-206ENST00000394104 AXDND1Q5T1B0 1012 aaPredicted RBP6.84□□□□□ -1.31
GAPVD1-206ENST00000394104 RAB3GAP2Q9H2M9 1393 aa6.84□□□□□ -1.31
GAPVD1-206ENST00000394104 INTS3Q68E01 1043 aaKnown RBP6.84□□□□□ -1.31
GAPVD1-206ENST00000394104 SEPT7Q16181 437 aaKnown RBP6.84□□□□□ -1.31
GAPVD1-206ENST00000394104 CHMP5Q9NZZ3 219 aa6.84□□□□□ -1.31
GAPVD1-206ENST00000394104 MAGEC2Q9UBF1 373 aaPredicted RBP6.84□□□□□ -1.31
GAPVD1-206ENST00000394104 WASHC2CQ9Y4E1 1318 aa6.84□□□□□ -1.31
GAPVD1-206ENST00000394104 E9PSI1 815 aa6.84□□□□□ -1.31
GAPVD1-206ENST00000394104 SYCP1Q15431 976 aa6.84□□□□□ -1.31
GAPVD1-206ENST00000394104 ENOX2Q16206 610 aaKnown RBP6.84□□□□□ -1.31
GAPVD1-206ENST00000394104 PHLDB1Q86UU1 1377 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms