RNA–Protein interactions for RNA: ENST00000393860.7

RAB5C-202, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-202ENST00000393860 IDI1Q13907 227 aa27.45■■□□□ 1.99
RAB5C-202ENST00000393860 STAC3Q96MF2 364 aa27.45■■□□□ 1.98
RAB5C-202ENST00000393860 MYO5BQ9ULV0 1848 aa27.42■■□□□ 1.98
RAB5C-202ENST00000393860 YTHDC1Q96MU7 727 aaKnown RBP27.42■■□□□ 1.98
RAB5C-202ENST00000393860 ESF1Q9H501 851 aaKnown RBP27.4■■□□□ 1.98
RAB5C-202ENST00000393860 CFAP70Q5T0N1 1121 aa27.39■■□□□ 1.98
RAB5C-202ENST00000393860 KIAA1210Q9ULL0 1709 aa27.39■■□□□ 1.98
RAB5C-202ENST00000393860 NUTM2DQ5VT03 806 aaPredicted RBP27.39■■□□□ 1.97
RAB5C-202ENST00000393860 SLC52A1Q9NWF4 448 aa27.39■■□□□ 1.97
RAB5C-202ENST00000393860 IQGAP1P46940 1657 aa27.39■■□□□ 1.97
RAB5C-202ENST00000393860 NRXN1Q9ULB1 1477 aa27.38■■□□□ 1.97
RAB5C-202ENST00000393860 ANP32CO43423 234 aa27.37■■□□□ 1.97
RAB5C-202ENST00000393860 TMEM131LA2VDJ0 1609 aa27.36■■□□□ 1.97
RAB5C-202ENST00000393860 NEXMIFQ5QGS0 1516 aa27.36■■□□□ 1.97
RAB5C-202ENST00000393860 SPATA31D1Q6ZQQ2 1576 aa27.35■■□□□ 1.97
RAB5C-202ENST00000393860 ZMYM3Q14202 1370 aa27.34■■□□□ 1.97
RAB5C-202ENST00000393860 RPGRIP1LQ68CZ1 1315 aa27.34■■□□□ 1.97
RAB5C-202ENST00000393860 SCAF11Q99590 1463 aaKnown RBP27.31■■□□□ 1.96
RAB5C-202ENST00000393860 PIK3C2GO75747 1445 aa27.31■■□□□ 1.96
RAB5C-202ENST00000393860 SENP3Q9H4L4 574 aaPredicted RBP27.3■■□□□ 1.96
RAB5C-202ENST00000393860 TESK2Q96S53 571 aa27.29■■□□□ 1.96
RAB5C-202ENST00000393860 STAG3Q9UJ98 1225 aa27.28■■□□□ 1.96
RAB5C-202ENST00000393860 DISP3Q9P2K9 1392 aa27.27■■□□□ 1.96
RAB5C-202ENST00000393860 VGFO15240 615 aaPredicted RBP27.24■■□□□ 1.95
RAB5C-202ENST00000393860 C14orf93Q9H972 538 aaKnown RBP27.22■■□□□ 1.95
RAB5C-202ENST00000393860 SETBP1Q9Y6X0 1596 aa27.22■■□□□ 1.95
RAB5C-202ENST00000393860 TMEM132EQ6IEE7 984 aa27.2■■□□□ 1.95
RAB5C-202ENST00000393860 A2ML1A8K2U0 1454 aa27.2■■□□□ 1.94
RAB5C-202ENST00000393860 FER1L4A9Z1Z3 1794 aa27.2■■□□□ 1.94
RAB5C-202ENST00000393860 EIF3AQ14152 1382 aaKnown RBP27.2■■□□□ 1.94
RAB5C-202ENST00000393860 ADGRB1O14514 1584 aa27.19■■□□□ 1.94
RAB5C-202ENST00000393860 PLPPR3Q6T4P5 718 aa27.19■■□□□ 1.94
RAB5C-202ENST00000393860 TNRQ92752 1358 aa27.18■■□□□ 1.94
RAB5C-202ENST00000393860 CEBPAP49715 358 aaPredicted RBP27.18■■□□□ 1.94
RAB5C-202ENST00000393860 TMF1P82094 1093 aa27.18■■□□□ 1.94
RAB5C-202ENST00000393860 CNGB1Q14028 1251 aaPredicted RBP27.17■■□□□ 1.94
RAB5C-202ENST00000393860 ZFYVE9O95405 1425 aa27.16■■□□□ 1.94
RAB5C-202ENST00000393860 CCER2I3L3R5 266 aa27.15■■□□□ 1.94
RAB5C-202ENST00000393860 C3P01024 1663 aa27.14■■□□□ 1.94
RAB5C-202ENST00000393860 TRAK1Q9UPV9 953 aa27.14■■□□□ 1.94
RAB5C-202ENST00000393860 RIMS2Q9UQ26 1411 aa27.12■■□□□ 1.93
RAB5C-202ENST00000393860 PRKRIP1Q9H875 184 aaPredicted RBP27.11■■□□□ 1.93
RAB5C-202ENST00000393860 MYO3AQ8NEV4 1616 aa27.11■■□□□ 1.93
RAB5C-202ENST00000393860 CENPBP07199 599 aaPredicted RBP27.1■■□□□ 1.93
RAB5C-202ENST00000393860 ASXL1Q8IXJ9 1541 aa27.1■■□□□ 1.93
RAB5C-202ENST00000393860 UBR1Q8IWV7 1749 aa27.06■■□□□ 1.92
RAB5C-202ENST00000393860 QRICH2Q9H0J4 1663 aa27.06■■□□□ 1.92
RAB5C-202ENST00000393860 CENPJQ9HC77 1338 aaPredicted RBP27.06■■□□□ 1.92
RAB5C-202ENST00000393860 ALKQ9UM73 1620 aa27.04■■□□□ 1.92
RAB5C-202ENST00000393860 ARHGEF28Q8N1W1 1705 aaKnown RBP27.04■■□□□ 1.92
RAB5C-202ENST00000393860 STK26Q9P289 416 aa27.03■■□□□ 1.92
RAB5C-202ENST00000393860 KDM5AP29375 1690 aaKnown RBP27.02■■□□□ 1.92
RAB5C-202ENST00000393860 CCDC184Q52MB2 194 aa27.02■■□□□ 1.92
RAB5C-202ENST00000393860 RIMS1Q86UR5 1692 aaKnown RBP27.01■■□□□ 1.91
RAB5C-202ENST00000393860 PANK3Q9H999 370 aa26.99■■□□□ 1.91
RAB5C-202ENST00000393860 MYOM1P52179 1685 aa26.99■■□□□ 1.91
RAB5C-202ENST00000393860 CDCA8Q53HL2 280 aa26.98■■□□□ 1.91
RAB5C-202ENST00000393860 NLRP1Q9C000 1473 aa26.98■■□□□ 1.91
RAB5C-202ENST00000393860 PTPRMP28827 1452 aa26.97■■□□□ 1.91
RAB5C-202ENST00000393860 NRXN3Q9Y4C0 1643 aa26.96■■□□□ 1.91
RAB5C-202ENST00000393860 SBNO2Q9Y2G9 1366 aa26.96■■□□□ 1.91
RAB5C-202ENST00000393860 SETD1AO15047 1707 aaKnown RBP26.95■■□□□ 1.91
RAB5C-202ENST00000393860 YTHDC2Q9H6S0 1430 aaKnown RBP26.95■■□□□ 1.91
RAB5C-202ENST00000393860 SAFB2Q14151 953 aaKnown RBP eCLIP26.95■■□□□ 1.9
RAB5C-202ENST00000393860 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.95■■□□□ 1.9
RAB5C-202ENST00000393860 TMEM2Q9UHN6 1383 aa26.95■■□□□ 1.9
RAB5C-202ENST00000393860 PER1O15534 1290 aaPredicted RBP26.92■■□□□ 1.9
RAB5C-202ENST00000393860 MRS2Q9HD23 443 aa26.9■■□□□ 1.9
RAB5C-202ENST00000393860 ADAMTSL3P82987 1691 aa26.9■■□□□ 1.9
RAB5C-202ENST00000393860 SLC24A1O60721 1099 aa26.9■■□□□ 1.9
RAB5C-202ENST00000393860 BCANQ96GW7 911 aa26.9■■□□□ 1.9
RAB5C-202ENST00000393860 HDGFP51858 240 aaKnown RBP26.88■■□□□ 1.89
RAB5C-202ENST00000393860 TULP4Q9NRJ4 1543 aa26.87■■□□□ 1.89
RAB5C-202ENST00000393860 PRAM1Q96QH2 718 aa26.87■■□□□ 1.89
RAB5C-202ENST00000393860 CC2D1BQ5T0F9 858 aaKnown RBP26.86■■□□□ 1.89
RAB5C-202ENST00000393860 LTKP29376 864 aa26.86■■□□□ 1.89
RAB5C-202ENST00000393860 KTN1Q86UP2 1357 aaKnown RBP26.86■■□□□ 1.89
RAB5C-202ENST00000393860 METP08581 1390 aa26.85■■□□□ 1.89
RAB5C-202ENST00000393860 POGKQ9P215 609 aa26.84■■□□□ 1.89
RAB5C-202ENST00000393860 MINK1Q8N4C8 1332 aaPredicted RBP26.83■■□□□ 1.88
RAB5C-202ENST00000393860 TXNDC2Q86VQ3 553 aa26.82■■□□□ 1.88
RAB5C-202ENST00000393860 LRPPRCP42704 1394 aaKnown RBP26.81■■□□□ 1.88
RAB5C-202ENST00000393860 RALBP1Q15311 655 aa26.81■■□□□ 1.88
RAB5C-202ENST00000393860 FAM9BQ8IZU0 186 aa26.81■■□□□ 1.88
RAB5C-202ENST00000393860 EVC2Q86UK5 1308 aa26.81■■□□□ 1.88
RAB5C-202ENST00000393860 PARD3Q8TEW0 1356 aa26.8■■□□□ 1.88
RAB5C-202ENST00000393860 CEP170BQ9Y4F5 1589 aaPredicted RBP26.79■■□□□ 1.88
RAB5C-202ENST00000393860 TMC1Q8TDI8 760 aa26.79■■□□□ 1.88
RAB5C-202ENST00000393860 KNSTRNQ9Y448 316 aa26.79■■□□□ 1.88
RAB5C-202ENST00000393860 SLIT1O75093 1534 aa26.79■■□□□ 1.88
RAB5C-202ENST00000393860 MYBBP1AQ9BQG0 1328 aaKnown RBP26.79■■□□□ 1.88
RAB5C-202ENST00000393860 CABP2Q9NPB3 220 aa26.78■■□□□ 1.88
RAB5C-202ENST00000393860 ARHGAP23Q9P227 1491 aa26.78■■□□□ 1.88
RAB5C-202ENST00000393860 WAPLQ7Z5K2 1190 aa26.78■■□□□ 1.88
RAB5C-202ENST00000393860 PLEKHG1Q9ULL1 1385 aa26.78■■□□□ 1.88
RAB5C-202ENST00000393860 PLEKHH1Q9ULM0 1364 aa26.78■■□□□ 1.88
RAB5C-202ENST00000393860 ADAMTS13Q76LX8 1427 aa26.77■■□□□ 1.88
RAB5C-202ENST00000393860 DLC1Q96QB1 1528 aa26.77■■□□□ 1.88
RAB5C-202ENST00000393860 EID1Q9Y6B2 187 aa26.77■■□□□ 1.88
RAB5C-202ENST00000393860 THEMISQ8N1K5 641 aaPredicted RBP26.76■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms