RNA–Protein interactions for RNA: ENST00000391993.7

TRAF3IP1-202, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-202ENST00000391993 BBXQ8WY36 941 aaPredicted RBP21.04■□□□□ 0.96
TRAF3IP1-202ENST00000391993 SPDYE4A6NLX3 237 aa21.03■□□□□ 0.96
TRAF3IP1-202ENST00000391993 ANKRD30BQ9BXX2 1392 aa21.03■□□□□ 0.96
TRAF3IP1-202ENST00000391993 CASC1Q6TDU7 716 aa21.02■□□□□ 0.96
TRAF3IP1-202ENST00000391993 PCDHB15Q9Y5E8 787 aa21.01■□□□□ 0.95
TRAF3IP1-202ENST00000391993 C1orf115Q9H7X2 142 aa21.01■□□□□ 0.95
TRAF3IP1-202ENST00000391993 KDM2BQ8NHM5 1336 aa21.01■□□□□ 0.95
TRAF3IP1-202ENST00000391993 CSPP1Q1MSJ5 1256 aa21.01■□□□□ 0.95
TRAF3IP1-202ENST00000391993 SPINK5Q9NQ38 1064 aaPredicted RBP21.01■□□□□ 0.95
TRAF3IP1-202ENST00000391993 CHMP3Q9Y3E7 222 aa21■□□□□ 0.95
TRAF3IP1-202ENST00000391993 ERBB4Q15303 1308 aa21■□□□□ 0.95
TRAF3IP1-202ENST00000391993 TSC1Q92574 1164 aa21■□□□□ 0.95
TRAF3IP1-202ENST00000391993 TSR2Q969E8 191 aaKnown RBP21■□□□□ 0.95
TRAF3IP1-202ENST00000391993 PDE3AQ14432 1141 aa20.99■□□□□ 0.95
TRAF3IP1-202ENST00000391993 GAS2L3Q86XJ1 694 aa20.99■□□□□ 0.95
TRAF3IP1-202ENST00000391993 ZNF592Q92610 1267 aa20.99■□□□□ 0.95
TRAF3IP1-202ENST00000391993 TAOK2Q9UL54 1235 aa20.98■□□□□ 0.95
TRAF3IP1-202ENST00000391993 CASKIN1Q8WXD9 1431 aa20.98■□□□□ 0.95
TRAF3IP1-202ENST00000391993 PDE4CQ08493 712 aa20.98■□□□□ 0.95
TRAF3IP1-202ENST00000391993 RBM27Q9P2N5 1060 aaKnown RBP20.98■□□□□ 0.95
TRAF3IP1-202ENST00000391993 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.97■□□□□ 0.95
TRAF3IP1-202ENST00000391993 SYCE3A1L190 88 aa20.97■□□□□ 0.95
TRAF3IP1-202ENST00000391993 RBM42Q9BTD8 480 aaKnown RBP20.97■□□□□ 0.95
TRAF3IP1-202ENST00000391993 TCP11L2Q8N4U5 519 aa20.96■□□□□ 0.95
TRAF3IP1-202ENST00000391993 TNNT3P45378 269 aaPredicted RBP20.95■□□□□ 0.94
TRAF3IP1-202ENST00000391993 ZNF830Q96NB3 372 aaPredicted RBP20.95■□□□□ 0.94
TRAF3IP1-202ENST00000391993 CGNQ9P2M7 1197 aaKnown RBP20.95■□□□□ 0.94
TRAF3IP1-202ENST00000391993 ANKRD30AQ9BXX3 1397 aa20.95■□□□□ 0.94
TRAF3IP1-202ENST00000391993 NESP48681 1621 aa20.93■□□□□ 0.94
TRAF3IP1-202ENST00000391993 BIVM-ERCC5R4GMW8 1640 aa20.93■□□□□ 0.94
TRAF3IP1-202ENST00000391993 TRERF1Q96PN7 1200 aa20.93■□□□□ 0.94
TRAF3IP1-202ENST00000391993 PCF11O94913 1555 aaKnown RBP20.93■□□□□ 0.94
TRAF3IP1-202ENST00000391993 IPO8O15397 1037 aaKnown RBP20.92■□□□□ 0.94
TRAF3IP1-202ENST00000391993 PLCD3Q8N3E9 789 aa20.92■□□□□ 0.94
TRAF3IP1-202ENST00000391993 NPHP1O15259 732 aa20.91■□□□□ 0.94
TRAF3IP1-202ENST00000391993 CCDC39Q9UFE4 941 aa20.91■□□□□ 0.94
TRAF3IP1-202ENST00000391993 ISY1Q9ULR0 285 aaKnown RBP20.91■□□□□ 0.94
TRAF3IP1-202ENST00000391993 PLEKHH1Q9ULM0 1364 aa20.91■□□□□ 0.94
TRAF3IP1-202ENST00000391993 PTPN23Q9H3S7 1636 aa20.91■□□□□ 0.94
TRAF3IP1-202ENST00000391993 HMGXB3Q12766 1538 aa20.91■□□□□ 0.94
TRAF3IP1-202ENST00000391993 ST18O60284 1047 aa20.91■□□□□ 0.94
TRAF3IP1-202ENST00000391993 MTERF4Q7Z6M4 381 aaKnown RBP20.91■□□□□ 0.94
TRAF3IP1-202ENST00000391993 SPC24Q8NBT2 197 aa20.91■□□□□ 0.94
TRAF3IP1-202ENST00000391993 K7ELQ4 463 aaPredicted RBP20.9■□□□□ 0.94
TRAF3IP1-202ENST00000391993 SYAP1Q96A49 352 aaPredicted RBP20.9■□□□□ 0.94
TRAF3IP1-202ENST00000391993 MIA2Q96PC5 1412 aa20.9■□□□□ 0.94
TRAF3IP1-202ENST00000391993 VGLL3A8MV65 326 aa20.89■□□□□ 0.94
TRAF3IP1-202ENST00000391993 OFD1O75665 1012 aa20.89■□□□□ 0.94
TRAF3IP1-202ENST00000391993 RLBP1P12271 317 aa20.89■□□□□ 0.93
TRAF3IP1-202ENST00000391993 DDX19BQ9UMR2 479 aa20.88■□□□□ 0.93
TRAF3IP1-202ENST00000391993 PPP4R3BQ5MIZ7 849 aa20.87■□□□□ 0.93
TRAF3IP1-202ENST00000391993 DMRT2Q9Y5R5 561 aa20.87■□□□□ 0.93
TRAF3IP1-202ENST00000391993 NUCB2P80303 420 aa20.87■□□□□ 0.93
TRAF3IP1-202ENST00000391993 EXOSC9Q06265 439 aaKnown RBP20.87■□□□□ 0.93
TRAF3IP1-202ENST00000391993 WWC1Q8IX03 1113 aa20.86■□□□□ 0.93
TRAF3IP1-202ENST00000391993 LRPPRCP42704 1394 aaKnown RBP20.86■□□□□ 0.93
TRAF3IP1-202ENST00000391993 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.86■□□□□ 0.93
TRAF3IP1-202ENST00000391993 GOLGA6L4A6NEF3 574 aa20.86■□□□□ 0.93
TRAF3IP1-202ENST00000391993 CCDC144AA2RUR9 1427 aa20.85■□□□□ 0.93
TRAF3IP1-202ENST00000391993 DNAJC5BQ9UF47 199 aa20.85■□□□□ 0.93
TRAF3IP1-202ENST00000391993 FYCO1Q9BQS8 1478 aa20.85■□□□□ 0.93
TRAF3IP1-202ENST00000391993 ERICH4A6NGS2 130 aa20.85■□□□□ 0.93
TRAF3IP1-202ENST00000391993 CHMP7Q8WUX9 453 aaPredicted RBP20.85■□□□□ 0.93
TRAF3IP1-202ENST00000391993 EIF3AQ14152 1382 aaKnown RBP20.85■□□□□ 0.93
TRAF3IP1-202ENST00000391993 FSD2A1L4K1 749 aa20.84■□□□□ 0.93
TRAF3IP1-202ENST00000391993 RPRD2Q5VT52 1461 aaKnown RBP20.84■□□□□ 0.93
TRAF3IP1-202ENST00000391993 RARSP54136 660 aaKnown RBP20.84■□□□□ 0.93
TRAF3IP1-202ENST00000391993 BAG4O95429 457 aaKnown RBP20.84■□□□□ 0.93
TRAF3IP1-202ENST00000391993 TRIM6-TRIM34B2RNG4 842 aa20.83■□□□□ 0.93
TRAF3IP1-202ENST00000391993 PRIM1P49642 420 aaKnown RBP20.83■□□□□ 0.93
TRAF3IP1-202ENST00000391993 GDPD2Q9HCC8 539 aa20.83■□□□□ 0.93
TRAF3IP1-202ENST00000391993 SASS6Q6UVJ0 657 aa20.83■□□□□ 0.93
TRAF3IP1-202ENST00000391993 MVPQ14764 893 aaKnown RBP20.83■□□□□ 0.92
TRAF3IP1-202ENST00000391993 TRAK1Q9UPV9 953 aa20.83■□□□□ 0.92
TRAF3IP1-202ENST00000391993 NUTM2DQ5VT03 806 aaPredicted RBP20.82■□□□□ 0.92
TRAF3IP1-202ENST00000391993 ANTXR1Q9H6X2 564 aa20.82■□□□□ 0.92
TRAF3IP1-202ENST00000391993 NOB1Q9ULX3 412 aaKnown RBP20.81■□□□□ 0.92
TRAF3IP1-202ENST00000391993 PDCL2Q8N4E4 241 aa20.81■□□□□ 0.92
TRAF3IP1-202ENST00000391993 CHMP4AQ9BY43 222 aa20.81■□□□□ 0.92
TRAF3IP1-202ENST00000391993 C17orf53Q8N3J3 647 aaPredicted RBP20.8■□□□□ 0.92
TRAF3IP1-202ENST00000391993 RUNDC1Q96C34 613 aa20.8■□□□□ 0.92
TRAF3IP1-202ENST00000391993 IFT57Q9NWB7 429 aa20.8■□□□□ 0.92
TRAF3IP1-202ENST00000391993 KIF3AQ9Y496 699 aa20.8■□□□□ 0.92
TRAF3IP1-202ENST00000391993 CHAMP1Q96JM3 812 aa20.8■□□□□ 0.92
TRAF3IP1-202ENST00000391993 USP19O94966 1318 aa20.79■□□□□ 0.92
TRAF3IP1-202ENST00000391993 MTHFSP49914 203 aa20.79■□□□□ 0.92
TRAF3IP1-202ENST00000391993 ZSCAN23Q3MJ62 389 aa20.79■□□□□ 0.92
TRAF3IP1-202ENST00000391993 CHMP4BQ9H444 224 aaKnown RBP20.79■□□□□ 0.92
TRAF3IP1-202ENST00000391993 POLA1P09884 1462 aaPredicted RBP20.79■□□□□ 0.92
TRAF3IP1-202ENST00000391993 GAS2L2Q8NHY3 880 aa20.78■□□□□ 0.92
TRAF3IP1-202ENST00000391993 USP25Q9UHP3 1055 aa20.78■□□□□ 0.92
TRAF3IP1-202ENST00000391993 NEK4P51957 841 aa20.78■□□□□ 0.92
TRAF3IP1-202ENST00000391993 CCDC27Q2M243 656 aa20.78■□□□□ 0.92
TRAF3IP1-202ENST00000391993 RILPL2Q969X0 211 aa20.78■□□□□ 0.92
TRAF3IP1-202ENST00000391993 CIZ1Q9ULV3 898 aaPredicted RBP20.78■□□□□ 0.92
TRAF3IP1-202ENST00000391993 AEBP1Q8IUX7 1158 aa20.77■□□□□ 0.92
TRAF3IP1-202ENST00000391993 KIAA1107Q9UPP5 1409 aa20.77■□□□□ 0.92
TRAF3IP1-202ENST00000391993 JARID2Q92833 1246 aaPredicted RBP20.77■□□□□ 0.92
TRAF3IP1-202ENST00000391993 TSPY26PQ9H489 355 aa20.77■□□□□ 0.92
TRAF3IP1-202ENST00000391993 TTC12Q9H892 705 aaPredicted RBP20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms