RNA–Protein interactions for RNA: ENST00000391941.6

ERCC2-201, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC2, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-201ENST00000391941 NEUROD2Q15784 382 aa23.47■■□□□ 1.35
ERCC2-201ENST00000391941 CDC42BPBQ9Y5S2 1711 aa23.47■■□□□ 1.35
ERCC2-201ENST00000391941 AMER1Q5JTC6 1135 aaPredicted RBP23.47■■□□□ 1.35
ERCC2-201ENST00000391941 ARXQ96QS3 562 aa23.46■■□□□ 1.35
ERCC2-201ENST00000391941 TNNT2P45379 298 aaPredicted RBP23.45■■□□□ 1.34
ERCC2-201ENST00000391941 LAMC1P11047 1609 aa23.44■■□□□ 1.34
ERCC2-201ENST00000391941 PREX2Q70Z35 1606 aa23.44■■□□□ 1.34
ERCC2-201ENST00000391941 PANK1Q8TE04 598 aa23.43■■□□□ 1.34
ERCC2-201ENST00000391941 UNC13BO14795 1591 aa23.43■■□□□ 1.34
ERCC2-201ENST00000391941 SLFN5Q08AF3 891 aa23.42■■□□□ 1.34
ERCC2-201ENST00000391941 RRP7AQ9Y3A4 280 aaKnown RBP23.42■■□□□ 1.34
ERCC2-201ENST00000391941 ZNF521Q96K83 1311 aa23.41■■□□□ 1.34
ERCC2-201ENST00000391941 MYO5CQ9NQX4 1742 aa23.4■■□□□ 1.34
ERCC2-201ENST00000391941 WDR7Q9Y4E6 1490 aa23.4■■□□□ 1.34
ERCC2-201ENST00000391941 SLKQ9H2G2 1235 aaPredicted RBP23.4■■□□□ 1.34
ERCC2-201ENST00000391941 TNNQ9UQP3 1299 aa23.4■■□□□ 1.34
ERCC2-201ENST00000391941 COG6Q9Y2V7 657 aa23.4■■□□□ 1.34
ERCC2-201ENST00000391941 ARHGAP5Q13017 1502 aa23.4■■□□□ 1.34
ERCC2-201ENST00000391941 EIF2AK4Q9P2K8 1649 aaKnown RBP23.39■■□□□ 1.34
ERCC2-201ENST00000391941 BCL2L13Q9BXK5 485 aa23.39■■□□□ 1.33
ERCC2-201ENST00000391941 EIF5BO60841 1220 aaKnown RBP23.36■■□□□ 1.33
ERCC2-201ENST00000391941 IQGAP3Q86VI3 1631 aa23.36■■□□□ 1.33
ERCC2-201ENST00000391941 SPRYD3Q8NCJ5 442 aa23.36■■□□□ 1.33
ERCC2-201ENST00000391941 SENP3Q9H4L4 574 aaPredicted RBP23.36■■□□□ 1.33
ERCC2-201ENST00000391941 TTC37Q6PGP7 1564 aa23.35■■□□□ 1.33
ERCC2-201ENST00000391941 CANXP27824 592 aaKnown RBP23.34■■□□□ 1.33
ERCC2-201ENST00000391941 POGKQ9P215 609 aa23.34■■□□□ 1.33
ERCC2-201ENST00000391941 MAST1Q9Y2H9 1570 aa23.33■■□□□ 1.33
ERCC2-201ENST00000391941 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.33■■□□□ 1.32
ERCC2-201ENST00000391941 ATP10AO60312 1499 aa23.33■■□□□ 1.32
ERCC2-201ENST00000391941 CLUAP1Q96AJ1 413 aa23.31■■□□□ 1.32
ERCC2-201ENST00000391941 USP19O94966 1318 aa23.31■■□□□ 1.32
ERCC2-201ENST00000391941 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.3■■□□□ 1.328e-6■□□□□ 10.5
ERCC2-201ENST00000391941 CARD14Q9BXL6 1004 aa23.3■■□□□ 1.32
ERCC2-201ENST00000391941 RNF17Q9BXT8 1623 aaKnown RBP23.3■■□□□ 1.32
ERCC2-201ENST00000391941 CFAP70Q5T0N1 1121 aa23.29■■□□□ 1.32
ERCC2-201ENST00000391941 AFAP1Q8N556 730 aa23.29■■□□□ 1.32
ERCC2-201ENST00000391941 PLXNC1O60486 1568 aa23.27■■□□□ 1.32
ERCC2-201ENST00000391941 DUOX2Q9NRD8 1548 aa23.27■■□□□ 1.32
ERCC2-201ENST00000391941 TRMT2AQ8IZ69 625 aaKnown RBP23.25■■□□□ 1.31
ERCC2-201ENST00000391941 CDCA8Q53HL2 280 aa23.25■■□□□ 1.31
ERCC2-201ENST00000391941 ASXL1Q8IXJ9 1541 aa23.24■■□□□ 1.31
ERCC2-201ENST00000391941 RLBP1P12271 317 aa23.24■■□□□ 1.31
ERCC2-201ENST00000391941 PIK3C2GO75747 1445 aa23.23■■□□□ 1.31
ERCC2-201ENST00000391941 MADDQ8WXG6 1647 aa23.23■■□□□ 1.31
ERCC2-201ENST00000391941 NKTRP30414 1462 aaKnown RBP23.22■■□□□ 1.31
ERCC2-201ENST00000391941 SCAF11Q99590 1463 aaKnown RBP23.21■■□□□ 1.31
ERCC2-201ENST00000391941 PCDHB15Q9Y5E8 787 aa23.21■■□□□ 1.31
ERCC2-201ENST00000391941 CENPJQ9HC77 1338 aaPredicted RBP23.21■■□□□ 1.31
ERCC2-201ENST00000391941 SYNMO15061 1565 aa23.2■■□□□ 1.3
ERCC2-201ENST00000391941 IQGAP1P46940 1657 aa23.2■■□□□ 1.3
ERCC2-201ENST00000391941 WWC1Q8IX03 1113 aa23.2■■□□□ 1.3
ERCC2-201ENST00000391941 E9PSI1 815 aa23.19■■□□□ 1.3
ERCC2-201ENST00000391941 CLASP1Q7Z460 1538 aa23.19■■□□□ 1.3
ERCC2-201ENST00000391941 EIF3AQ14152 1382 aaKnown RBP23.18■■□□□ 1.3
ERCC2-201ENST00000391941 TRAPPC8Q9Y2L5 1435 aa23.17■■□□□ 1.3
ERCC2-201ENST00000391941 ADGRF5Q8IZF2 1346 aa23.17■■□□□ 1.3
ERCC2-201ENST00000391941 GZF1Q9H116 711 aaPredicted RBP23.17■■□□□ 1.3
ERCC2-201ENST00000391941 CHGAP10645 457 aaKnown RBP23.16■■□□□ 1.3
ERCC2-201ENST00000391941 NPC1L1Q9UHC9 1359 aa23.14■■□□□ 1.3
ERCC2-201ENST00000391941 EFCAB2Q5VUJ9 269 aa23.14■■□□□ 1.29
ERCC2-201ENST00000391941 SLC12A5Q9H2X9 1139 aa23.14■■□□□ 1.29
ERCC2-201ENST00000391941 SCAPERQ9BY12 1400 aa23.13■■□□□ 1.29
ERCC2-201ENST00000391941 MYOM1P52179 1685 aa23.12■■□□□ 1.29
ERCC2-201ENST00000391941 ABCC2Q92887 1545 aa23.12■■□□□ 1.29
ERCC2-201ENST00000391941 NUTM2DQ5VT03 806 aaPredicted RBP23.11■■□□□ 1.29
ERCC2-201ENST00000391941 TRAK1Q9UPV9 953 aa23.11■■□□□ 1.29
ERCC2-201ENST00000391941 ERCC6L2Q5T890 1561 aa23.11■■□□□ 1.29
ERCC2-201ENST00000391941 UGGT1Q9NYU2 1555 aa23.11■■□□□ 1.29
ERCC2-201ENST00000391941 PDZRN3Q9UPQ7 1066 aa23.11■■□□□ 1.29
ERCC2-201ENST00000391941 PLCH2O75038 1416 aa23.11■■□□□ 1.29
ERCC2-201ENST00000391941 KIF3BO15066 747 aa23.1■■□□□ 1.29
ERCC2-201ENST00000391941 TCP11L2Q8N4U5 519 aa23.1■■□□□ 1.29
ERCC2-201ENST00000391941 TRPM2O94759 1503 aa23.1■■□□□ 1.29
ERCC2-201ENST00000391941 RARSP54136 660 aaKnown RBP23.09■■□□□ 1.29
ERCC2-201ENST00000391941 SPAG9O60271 1321 aaKnown RBP23.09■■□□□ 1.29
ERCC2-201ENST00000391941 TMEM132EQ6IEE7 984 aa23.08■■□□□ 1.29
ERCC2-201ENST00000391941 SPHKAPQ2M3C7 1700 aa23.08■■□□□ 1.29
ERCC2-201ENST00000391941 CGNL1Q0VF96 1302 aa23.08■■□□□ 1.29
ERCC2-201ENST00000391941 MORC1Q86VD1 984 aa23.07■■□□□ 1.28
ERCC2-201ENST00000391941 TBC1D2Q9BYX2 928 aa23.07■■□□□ 1.28
ERCC2-201ENST00000391941 CLTCL1P53675 1640 aa23.07■■□□□ 1.28
ERCC2-201ENST00000391941 PTPRTO14522 1441 aa23.07■■□□□ 1.28
ERCC2-201ENST00000391941 PDE3AQ14432 1141 aa23.06■■□□□ 1.28
ERCC2-201ENST00000391941 TSR2Q969E8 191 aaKnown RBP23.06■■□□□ 1.28
ERCC2-201ENST00000391941 STAC3Q96MF2 364 aa23.06■■□□□ 1.28
ERCC2-201ENST00000391941 RRAGDQ9NQL2 400 aaPredicted RBP23.05■■□□□ 1.28
ERCC2-201ENST00000391941 ABCC1P33527 1531 aa23.04■■□□□ 1.28
ERCC2-201ENST00000391941 ERVK-7P63135 1459 aa23.04■■□□□ 1.28
ERCC2-201ENST00000391941 SAFB2Q14151 953 aaKnown RBP eCLIP23.04■■□□□ 1.28
ERCC2-201ENST00000391941 MTHFSP49914 203 aa23.03■■□□□ 1.28
ERCC2-201ENST00000391941 PANK2Q9BZ23 570 aa23.03■■□□□ 1.28
ERCC2-201ENST00000391941 KDM5AP29375 1690 aaKnown RBP23.03■■□□□ 1.28
ERCC2-201ENST00000391941 MFAP1P55081 439 aaKnown RBP23.03■■□□□ 1.28
ERCC2-201ENST00000391941 ANTXR1Q9H6X2 564 aa23.02■■□□□ 1.28
ERCC2-201ENST00000391941 CEP152O94986 1710 aa23.02■■□□□ 1.28
ERCC2-201ENST00000391941 NLRP1Q9C000 1473 aa23.02■■□□□ 1.28
ERCC2-201ENST00000391941 BECN1Q14457 450 aa23.02■■□□□ 1.28
ERCC2-201ENST00000391941 MAPK8IP3Q9UPT6 1336 aa23.01■■□□□ 1.27
ERCC2-201ENST00000391941 NSD3Q9BZ95 1437 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms