RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 PPLO60437 1756 aa17.09■□□□□ 0.33
SPTBN1-203ENST00000389980 GPRASP1Q5JY77 1395 aa17.08■□□□□ 0.33
SPTBN1-203ENST00000389980 STAC3Q96MF2 364 aa17.08■□□□□ 0.33
SPTBN1-203ENST00000389980 MYOM2P54296 1465 aa17.07■□□□□ 0.32
SPTBN1-203ENST00000389980 CFAP70Q5T0N1 1121 aa17.06■□□□□ 0.32
SPTBN1-203ENST00000389980 CCDC7Q96M83 1385 aa17.06■□□□□ 0.32
SPTBN1-203ENST00000389980 SPATA31D1Q6ZQQ2 1576 aa17.06■□□□□ 0.32
SPTBN1-203ENST00000389980 KIF7Q2M1P5 1343 aa17.05■□□□□ 0.32
SPTBN1-203ENST00000389980 TMEM131LA2VDJ0 1609 aa17.05■□□□□ 0.32
SPTBN1-203ENST00000389980 SENP3Q9H4L4 574 aaPredicted RBP17.05■□□□□ 0.32
SPTBN1-203ENST00000389980 LAMC1P11047 1609 aa17.04■□□□□ 0.32
SPTBN1-203ENST00000389980 POLR1AO95602 1720 aaPredicted RBP17.04■□□□□ 0.32
SPTBN1-203ENST00000389980 NEXMIFQ5QGS0 1516 aa17.03■□□□□ 0.32
SPTBN1-203ENST00000389980 NRXN1Q9ULB1 1477 aa17.03■□□□□ 0.32
SPTBN1-203ENST00000389980 RPGRIP1LQ68CZ1 1315 aa17.03■□□□□ 0.32
SPTBN1-203ENST00000389980 CEBPAP49715 358 aaPredicted RBP17.03■□□□□ 0.32
SPTBN1-203ENST00000389980 PLPPR3Q6T4P5 718 aa17.03■□□□□ 0.32
SPTBN1-203ENST00000389980 POLR3GLQ9BT43 218 aa17.03■□□□□ 0.32
SPTBN1-203ENST00000389980 STAG3Q9UJ98 1225 aa17.02■□□□□ 0.32
SPTBN1-203ENST00000389980 KIAA1210Q9ULL0 1709 aa17.01■□□□□ 0.31
SPTBN1-203ENST00000389980 FER1L4A9Z1Z3 1794 aa17■□□□□ 0.31
SPTBN1-203ENST00000389980 PIK3C2GO75747 1445 aa17■□□□□ 0.31
SPTBN1-203ENST00000389980 IQGAP1P46940 1657 aa16.99■□□□□ 0.31
SPTBN1-203ENST00000389980 VGFO15240 615 aaPredicted RBP16.98■□□□□ 0.31
SPTBN1-203ENST00000389980 TNRQ92752 1358 aa16.98■□□□□ 0.31
SPTBN1-203ENST00000389980 C3P01024 1663 aa16.97■□□□□ 0.31
SPTBN1-203ENST00000389980 A2ML1A8K2U0 1454 aa16.97■□□□□ 0.31
SPTBN1-203ENST00000389980 TESK2Q96S53 571 aa16.96■□□□□ 0.31
SPTBN1-203ENST00000389980 C14orf93Q9H972 538 aaKnown RBP16.96■□□□□ 0.31
SPTBN1-203ENST00000389980 SCAF11Q99590 1463 aaKnown RBP16.96■□□□□ 0.31
SPTBN1-203ENST00000389980 TMEM132EQ6IEE7 984 aa16.96■□□□□ 0.31
SPTBN1-203ENST00000389980 SCAF1Q9H7N4 1312 aaKnown RBP16.95■□□□□ 0.3
SPTBN1-203ENST00000389980 DISP3Q9P2K9 1392 aa16.93■□□□□ 0.3
SPTBN1-203ENST00000389980 ZFYVE9O95405 1425 aa16.92■□□□□ 0.3
SPTBN1-203ENST00000389980 ADGRB1O14514 1584 aa16.91■□□□□ 0.3
SPTBN1-203ENST00000389980 ANP32CO43423 234 aa16.91■□□□□ 0.3
SPTBN1-203ENST00000389980 YTHDC1Q96MU7 727 aaKnown RBP16.91■□□□□ 0.3
SPTBN1-203ENST00000389980 RIMS2Q9UQ26 1411 aa16.91■□□□□ 0.3
SPTBN1-203ENST00000389980 SETBP1Q9Y6X0 1596 aa16.91■□□□□ 0.3
SPTBN1-203ENST00000389980 TRAK1Q9UPV9 953 aa16.91■□□□□ 0.3
SPTBN1-203ENST00000389980 RIMS1Q86UR5 1692 aaKnown RBP16.89■□□□□ 0.29
SPTBN1-203ENST00000389980 UBR1Q8IWV7 1749 aa16.89■□□□□ 0.29
SPTBN1-203ENST00000389980 EIF3AQ14152 1382 aaKnown RBP16.89■□□□□ 0.29
SPTBN1-203ENST00000389980 TMF1P82094 1093 aa16.88■□□□□ 0.29
SPTBN1-203ENST00000389980 ASXL1Q8IXJ9 1541 aa16.85■□□□□ 0.29
SPTBN1-203ENST00000389980 STK26Q9P289 416 aa16.85■□□□□ 0.29
SPTBN1-203ENST00000389980 ADAMTSL3P82987 1691 aa16.85■□□□□ 0.29
SPTBN1-203ENST00000389980 NLRP1Q9C000 1473 aa16.85■□□□□ 0.29
SPTBN1-203ENST00000389980 CNGB1Q14028 1251 aaPredicted RBP16.85■□□□□ 0.29
SPTBN1-203ENST00000389980 ALKQ9UM73 1620 aa16.84■□□□□ 0.29
SPTBN1-203ENST00000389980 KDM5AP29375 1690 aaKnown RBP16.84■□□□□ 0.29
SPTBN1-203ENST00000389980 TMEM2Q9UHN6 1383 aa16.83■□□□□ 0.28
SPTBN1-203ENST00000389980 CENPJQ9HC77 1338 aaPredicted RBP16.83■□□□□ 0.28
SPTBN1-203ENST00000389980 MYO3AQ8NEV4 1616 aa16.82■□□□□ 0.28
SPTBN1-203ENST00000389980 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.82■□□□□ 0.28
SPTBN1-203ENST00000389980 PTPRMP28827 1452 aa16.81■□□□□ 0.28
SPTBN1-203ENST00000389980 ARHGEF28Q8N1W1 1705 aaKnown RBP16.81■□□□□ 0.28
SPTBN1-203ENST00000389980 QRICH2Q9H0J4 1663 aa16.8■□□□□ 0.28
SPTBN1-203ENST00000389980 NRXN3Q9Y4C0 1643 aa16.8■□□□□ 0.28
SPTBN1-203ENST00000389980 CENPBP07199 599 aaPredicted RBP16.8■□□□□ 0.28
SPTBN1-203ENST00000389980 LTKP29376 864 aa16.8■□□□□ 0.28
SPTBN1-203ENST00000389980 SAFB2Q14151 953 aaKnown RBP eCLIP16.8■□□□□ 0.28
SPTBN1-203ENST00000389980 BCANQ96GW7 911 aa16.79■□□□□ 0.28
SPTBN1-203ENST00000389980 SETD1AO15047 1707 aaKnown RBP16.79■□□□□ 0.28
SPTBN1-203ENST00000389980 PRKRIP1Q9H875 184 aaPredicted RBP16.79■□□□□ 0.28
SPTBN1-203ENST00000389980 YTHDC2Q9H6S0 1430 aaKnown RBP16.78■□□□□ 0.28
SPTBN1-203ENST00000389980 HDGFP51858 240 aaKnown RBP16.78■□□□□ 0.28
SPTBN1-203ENST00000389980 TXNDC2Q86VQ3 553 aa16.77■□□□□ 0.27
SPTBN1-203ENST00000389980 PANK3Q9H999 370 aa16.77■□□□□ 0.27
SPTBN1-203ENST00000389980 CCER2I3L3R5 266 aa16.76■□□□□ 0.27
SPTBN1-203ENST00000389980 CDCA8Q53HL2 280 aa16.76■□□□□ 0.27
SPTBN1-203ENST00000389980 METP08581 1390 aa16.75■□□□□ 0.27
SPTBN1-203ENST00000389980 SBNO2Q9Y2G9 1366 aa16.75■□□□□ 0.27
SPTBN1-203ENST00000389980 PRAM1Q96QH2 718 aa16.74■□□□□ 0.27
SPTBN1-203ENST00000389980 CEP170BQ9Y4F5 1589 aaPredicted RBP16.74■□□□□ 0.27
SPTBN1-203ENST00000389980 THEMISQ8N1K5 641 aaPredicted RBP16.74■□□□□ 0.27
SPTBN1-203ENST00000389980 MYOM1P52179 1685 aa16.73■□□□□ 0.27
SPTBN1-203ENST00000389980 CCDC184Q52MB2 194 aa16.73■□□□□ 0.27
SPTBN1-203ENST00000389980 EID1Q9Y6B2 187 aa16.73■□□□□ 0.27
SPTBN1-203ENST00000389980 SLIT1O75093 1534 aa16.73■□□□□ 0.27
SPTBN1-203ENST00000389980 PER1O15534 1290 aaPredicted RBP16.72■□□□□ 0.27
SPTBN1-203ENST00000389980 SETD1BQ9UPS6 1966 aaKnown RBP16.72■□□□□ 0.27
SPTBN1-203ENST00000389980 ARHGAP23Q9P227 1491 aa16.72■□□□□ 0.27
SPTBN1-203ENST00000389980 SLC24A1O60721 1099 aa16.72■□□□□ 0.27
SPTBN1-203ENST00000389980 POGKQ9P215 609 aa16.72■□□□□ 0.27
SPTBN1-203ENST00000389980 ADAMTS13Q76LX8 1427 aa16.71■□□□□ 0.27
SPTBN1-203ENST00000389980 PLEKHG1Q9ULL1 1385 aa16.71■□□□□ 0.27
SPTBN1-203ENST00000389980 MINK1Q8N4C8 1332 aaPredicted RBP16.71■□□□□ 0.27
SPTBN1-203ENST00000389980 WAPLQ7Z5K2 1190 aa16.71■□□□□ 0.27
SPTBN1-203ENST00000389980 SLC26A8Q96RN1 970 aa16.71■□□□□ 0.27
SPTBN1-203ENST00000389980 LRPPRCP42704 1394 aaKnown RBP16.7■□□□□ 0.26
SPTBN1-203ENST00000389980 TULP4Q9NRJ4 1543 aa16.7■□□□□ 0.26
SPTBN1-203ENST00000389980 PLEKHH1Q9ULM0 1364 aa16.69■□□□□ 0.26
SPTBN1-203ENST00000389980 CABP2Q9NPB3 220 aa16.68■□□□□ 0.26
SPTBN1-203ENST00000389980 EVC2Q86UK5 1308 aa16.67■□□□□ 0.26
SPTBN1-203ENST00000389980 CC2D1BQ5T0F9 858 aaKnown RBP16.67■□□□□ 0.26
SPTBN1-203ENST00000389980 ABCC11Q96J66 1382 aa16.67■□□□□ 0.26
SPTBN1-203ENST00000389980 TMC1Q8TDI8 760 aa16.67■□□□□ 0.26
SPTBN1-203ENST00000389980 ZNF142P52746 1687 aaPredicted RBP16.66■□□□□ 0.26
SPTBN1-203ENST00000389980 SLC12A5Q9H2X9 1139 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms