RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 GOLGA8CPA6NN73 597 aa5.73□□□□□ -1.49
RNU6-541P-201ENST00000384709 ZNF787Q6DD87 383 aa5.73□□□□□ -1.49
RNU6-541P-201ENST00000384709 SAMD7Q7Z3H4 446 aa5.73□□□□□ -1.49
RNU6-541P-201ENST00000384709 PHOX2BQ99453 314 aa5.73□□□□□ -1.49
RNU6-541P-201ENST00000384709 FAM161AQ3B820 660 aa5.72□□□□□ -1.49
RNU6-541P-201ENST00000384709 SWT1Q5T5J6 900 aaKnown RBP5.72□□□□□ -1.49
RNU6-541P-201ENST00000384709 NYAP1Q6ZVC0 841 aa5.72□□□□□ -1.49
RNU6-541P-201ENST00000384709 CCDC102AQ96A19 550 aa5.72□□□□□ -1.49
RNU6-541P-201ENST00000384709 KCTD12Q96CX2 325 aaKnown RBP5.72□□□□□ -1.49
RNU6-541P-201ENST00000384709 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.72□□□□□ -1.49
RNU6-541P-201ENST00000384709 AMHR2Q16671 573 aa5.71□□□□□ -1.5
RNU6-541P-201ENST00000384709 LRCH3Q96II8 777 aa5.71□□□□□ -1.5
RNU6-541P-201ENST00000384709 DAXXQ9UER7 740 aaPredicted RBP5.71□□□□□ -1.5
RNU6-541P-201ENST00000384709 TSR3Q9UJK0 312 aaKnown RBP5.71□□□□□ -1.5
RNU6-541P-201ENST00000384709 SLF2Q8IX21 1173 aa5.7□□□□□ -1.5
RNU6-541P-201ENST00000384709 NECTIN2Q92692 538 aa5.7□□□□□ -1.5
RNU6-541P-201ENST00000384709 AK7Q96M32 723 aa5.7□□□□□ -1.5
RNU6-541P-201ENST00000384709 BCAMP50895 628 aa5.69□□□□□ -1.5
RNU6-541P-201ENST00000384709 HDGFP51858 240 aaKnown RBP5.69□□□□□ -1.5
RNU6-541P-201ENST00000384709 TRIM66O15016 1216 aa5.68□□□□□ -1.5
RNU6-541P-201ENST00000384709 HPS5Q9UPZ3 1129 aa5.68□□□□□ -1.5
RNU6-541P-201ENST00000384709 SLC10A3P09131 477 aa5.67□□□□□ -1.5
RNU6-541P-201ENST00000384709 LAPTM4AQ15012 233 aa5.67□□□□□ -1.5
RNU6-541P-201ENST00000384709 KRI1Q8N9T8 703 aaKnown RBP5.67□□□□□ -1.5
RNU6-541P-201ENST00000384709 WBP1LQ9NX94 342 aa5.67□□□□□ -1.5
RNU6-541P-201ENST00000384709 ITGBL1O95965 494 aaPredicted RBP5.66□□□□□ -1.5
RNU6-541P-201ENST00000384709 PPP4CP60510 307 aa5.66□□□□□ -1.5
RNU6-541P-201ENST00000384709 REPIN1Q9BWE0 567 aaKnown RBP5.66□□□□□ -1.5
RNU6-541P-201ENST00000384709 SLC24A3Q9HC58 644 aa5.66□□□□□ -1.5
RNU6-541P-201ENST00000384709 GPCPD1Q9NPB8 672 aa5.66□□□□□ -1.5
RNU6-541P-201ENST00000384709 CD46P15529 392 aa5.65□□□□□ -1.5
RNU6-541P-201ENST00000384709 CLCN1P35523 988 aa5.65□□□□□ -1.5
RNU6-541P-201ENST00000384709 PTPN5P54829 565 aa5.65□□□□□ -1.5
RNU6-541P-201ENST00000384709 FAM217BQ9NTX9 383 aaPredicted RBP5.65□□□□□ -1.5
RNU6-541P-201ENST00000384709 SLC4A3P48751 1232 aa5.64□□□□□ -1.51
RNU6-541P-201ENST00000384709 SULF1Q8IWU6 871 aa5.64□□□□□ -1.51
RNU6-541P-201ENST00000384709 PRR14Q9BWN1 585 aa5.64□□□□□ -1.51
RNU6-541P-201ENST00000384709 ACTN4O43707 911 aaKnown RBP5.63□□□□□ -1.51
RNU6-541P-201ENST00000384709 APLP1P51693 650 aa5.63□□□□□ -1.51
RNU6-541P-201ENST00000384709 MDM2Q00987 491 aaPredicted RBP5.63□□□□□ -1.51
RNU6-541P-201ENST00000384709 PDE4DQ08499 809 aa5.63□□□□□ -1.51
RNU6-541P-201ENST00000384709 NLRP7Q8WX94 980 aa5.63□□□□□ -1.51
RNU6-541P-201ENST00000384709 GFRA3O60609 400 aa5.62□□□□□ -1.51
RNU6-541P-201ENST00000384709 GCGRP47871 477 aa5.62□□□□□ -1.51
RNU6-541P-201ENST00000384709 TJAP1Q5JTD0 557 aa5.62□□□□□ -1.51
RNU6-541P-201ENST00000384709 RSPH4AQ5TD94 716 aa5.62□□□□□ -1.51
RNU6-541P-201ENST00000384709 PARP9Q8IXQ6 854 aa5.62□□□□□ -1.51
RNU6-541P-201ENST00000384709 SUZ12Q15022 739 aaKnown RBP5.61□□□□□ -1.51
RNU6-541P-201ENST00000384709 KMT5BQ4FZB7 885 aa5.61□□□□□ -1.51
RNU6-541P-201ENST00000384709 DDX11L8A8MPP1 907 aa5.6□□□□□ -1.51
RNU6-541P-201ENST00000384709 CFHP08603 1231 aa5.6□□□□□ -1.51
RNU6-541P-201ENST00000384709 SSTR3P32745 418 aaPredicted RBP5.6□□□□□ -1.51
RNU6-541P-201ENST00000384709 TPRNQ4KMQ1 711 aa5.6□□□□□ -1.51
RNU6-541P-201ENST00000384709 GIGYF2Q6Y7W6 1299 aaKnown RBP5.6□□□□□ -1.51
RNU6-541P-201ENST00000384709 MS4A1P11836 297 aa5.58□□□□□ -1.52
RNU6-541P-201ENST00000384709 IL21Q9HBE4 155 aa5.58□□□□□ -1.52
RNU6-541P-201ENST00000384709 SALL2Q9Y467 1007 aaPredicted RBP5.58□□□□□ -1.52
RNU6-541P-201ENST00000384709 RNF40O75150 1001 aa5.57□□□□□ -1.52
RNU6-541P-201ENST00000384709 ATP6V1AP38606 617 aa5.57□□□□□ -1.52
RNU6-541P-201ENST00000384709 USP46P62068 366 aa5.57□□□□□ -1.52
RNU6-541P-201ENST00000384709 KCNC4Q03721 635 aa5.57□□□□□ -1.52
RNU6-541P-201ENST00000384709 MORN1Q5T089 497 aa5.57□□□□□ -1.52
RNU6-541P-201ENST00000384709 RDH13Q8NBN7 331 aa5.57□□□□□ -1.52
RNU6-541P-201ENST00000384709 MTRQ99707 1265 aa5.57□□□□□ -1.52
RNU6-541P-201ENST00000384709 PCDHB3Q9Y5E6 796 aa5.57□□□□□ -1.52
RNU6-541P-201ENST00000384709 KDM4AO75164 1064 aa5.56□□□□□ -1.52
RNU6-541P-201ENST00000384709 ZPR1O75312 459 aa5.56□□□□□ -1.52
RNU6-541P-201ENST00000384709 GJA5P36382 358 aa5.56□□□□□ -1.52
RNU6-541P-201ENST00000384709 FUT2Q10981 343 aa5.56□□□□□ -1.52
RNU6-541P-201ENST00000384709 TTLL12Q14166 644 aaPredicted RBP5.56□□□□□ -1.52
RNU6-541P-201ENST00000384709 DIXDC1Q155Q3 683 aa5.55□□□□□ -1.52
RNU6-541P-201ENST00000384709 TUSC1Q2TAM9 212 aa5.55□□□□□ -1.52
RNU6-541P-201ENST00000384709 BLOC1S3Q6QNY0 202 aa5.55□□□□□ -1.52
RNU6-541P-201ENST00000384709 SPIRE2Q8WWL2 714 aa5.55□□□□□ -1.52
RNU6-541P-201ENST00000384709 HOXA2O43364 376 aa5.54□□□□□ -1.52
RNU6-541P-201ENST00000384709 GRIPAP1Q4V328 841 aa5.54□□□□□ -1.52
RNU6-541P-201ENST00000384709 THAP11Q96EK4 314 aa5.54□□□□□ -1.52
RNU6-541P-201ENST00000384709 BEGAINQ9BUH8 593 aa5.54□□□□□ -1.52
RNU6-541P-201ENST00000384709 KDM4CQ9H3R0 1056 aa5.54□□□□□ -1.52
RNU6-541P-201ENST00000384709 NR1I2O75469 434 aa5.53□□□□□ -1.52
RNU6-541P-201ENST00000384709 BRPF1P55201 1214 aaPredicted RBP5.53□□□□□ -1.52
RNU6-541P-201ENST00000384709 LCE2AQ5TA79 106 aaPredicted RBP5.53□□□□□ -1.52
RNU6-541P-201ENST00000384709 SCUBE3Q8IX30 993 aa5.53□□□□□ -1.52
RNU6-541P-201ENST00000384709 ZNF516Q92618 1163 aa5.53□□□□□ -1.52
RNU6-541P-201ENST00000384709 STK17AQ9UEE5 414 aa5.53□□□□□ -1.52
RNU6-541P-201ENST00000384709 BRICD5Q6PL45 260 aa5.52□□□□□ -1.53
RNU6-541P-201ENST00000384709 SLC27A5Q9Y2P5 690 aa5.52□□□□□ -1.53
RNU6-541P-201ENST00000384709 ADH1BP00325 375 aa5.51□□□□□ -1.53
RNU6-541P-201ENST00000384709 PRKCSHP14314 528 aaPredicted RBP5.51□□□□□ -1.53
RNU6-541P-201ENST00000384709 PUS10Q3MIT2 529 aaKnown RBP5.51□□□□□ -1.53
RNU6-541P-201ENST00000384709 NUTM1Q86Y26 1132 aa5.51□□□□□ -1.53
RNU6-541P-201ENST00000384709 DDRGK1Q96HY6 314 aa5.51□□□□□ -1.53
RNU6-541P-201ENST00000384709 GPBP1L1Q9HC44 474 aaPredicted RBP5.51□□□□□ -1.53
RNU6-541P-201ENST00000384709 PLEKHG3A1L390 1219 aa5.5□□□□□ -1.53
RNU6-541P-201ENST00000384709 SPTLC1O15269 473 aa5.5□□□□□ -1.53
RNU6-541P-201ENST00000384709 COPS2P61201 443 aa5.5□□□□□ -1.53
RNU6-541P-201ENST00000384709 MSS51Q4VC12 460 aa5.5□□□□□ -1.53
RNU6-541P-201ENST00000384709 TREML4Q6UXN2 200 aa5.5□□□□□ -1.53
RNU6-541P-201ENST00000384709 TBC1D2Q9BYX2 928 aa5.5□□□□□ -1.53
RNU6-541P-201ENST00000384709 GOPCQ9HD26 462 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms