RNA–Protein interactions for RNA: ENST00000383698.3

VGLL3-201, Transcript of vestigial like family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VGLL3, Length 2,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL3-201ENST00000383698 CDCA8Q53HL2 280 aa28.53■■■□□ 2.16
VGLL3-201ENST00000383698 CFAP70Q5T0N1 1121 aa28.53■■■□□ 2.16
VGLL3-201ENST00000383698 ASXL2Q76L83 1435 aa28.53■■■□□ 2.16
VGLL3-201ENST00000383698 MROH1Q8NDA8 1641 aa28.52■■■□□ 2.16
VGLL3-201ENST00000383698 SYNMO15061 1565 aa28.52■■■□□ 2.16
VGLL3-201ENST00000383698 STAC3Q96MF2 364 aa28.51■■■□□ 2.15
VGLL3-201ENST00000383698 ADGRF5Q8IZF2 1346 aa28.5■■■□□ 2.15
VGLL3-201ENST00000383698 INSRP06213 1382 aa28.5■■■□□ 2.15
VGLL3-201ENST00000383698 EIF3AQ14152 1382 aaKnown RBP28.5■■■□□ 2.15
VGLL3-201ENST00000383698 WDR43Q15061 677 aaKnown RBP eCLIP28.5■■■□□ 2.15
VGLL3-201ENST00000383698 ZMYM4Q5VZL5 1548 aa28.5■■■□□ 2.15
VGLL3-201ENST00000383698 MYOM1P52179 1685 aa28.48■■■□□ 2.15
VGLL3-201ENST00000383698 ASXL1Q8IXJ9 1541 aa28.47■■■□□ 2.15
VGLL3-201ENST00000383698 ABCA6Q8N139 1617 aa28.45■■■□□ 2.15
VGLL3-201ENST00000383698 MAP3K4Q9Y6R4 1608 aa28.44■■■□□ 2.14
VGLL3-201ENST00000383698 EFCAB6Q5THR3 1501 aa28.43■■■□□ 2.14
VGLL3-201ENST00000383698 KIDINS220Q9ULH0 1771 aa28.43■■■□□ 2.14
VGLL3-201ENST00000383698 PLEKHH1Q9ULM0 1364 aa28.43■■■□□ 2.14
VGLL3-201ENST00000383698 KDM5AP29375 1690 aaKnown RBP28.42■■■□□ 2.14
VGLL3-201ENST00000383698 KIAA1210Q9ULL0 1709 aa28.42■■■□□ 2.14
VGLL3-201ENST00000383698 CHGAP10645 457 aaKnown RBP28.42■■■□□ 2.14
VGLL3-201ENST00000383698 PPRC1Q5VV67 1664 aaKnown RBP28.41■■■□□ 2.14
VGLL3-201ENST00000383698 MROH2AA6NES4 1674 aa28.41■■■□□ 2.14
VGLL3-201ENST00000383698 KIF1BO60333 1816 aa28.4■■■□□ 2.14
VGLL3-201ENST00000383698 CRBNQ96SW2 442 aa28.4■■■□□ 2.14
VGLL3-201ENST00000383698 MYOM2P54296 1465 aa28.39■■■□□ 2.14
VGLL3-201ENST00000383698 ERVK-7P63135 1459 aa28.38■■■□□ 2.13
VGLL3-201ENST00000383698 CCDC146Q8IYE0 955 aa28.38■■■□□ 2.13
VGLL3-201ENST00000383698 NOP58Q9Y2X3 529 aaKnown RBP28.38■■■□□ 2.13
VGLL3-201ENST00000383698 PAK3O75914 559 aaPredicted RBP28.37■■■□□ 2.13
VGLL3-201ENST00000383698 NEURL4Q96JN8 1562 aa28.36■■■□□ 2.13
VGLL3-201ENST00000383698 ANP32AP39687 249 aaKnown RBP28.35■■■□□ 2.13
VGLL3-201ENST00000383698 C20orf194Q5TEA3 1177 aa28.35■■■□□ 2.13
VGLL3-201ENST00000383698 ZNF518AQ6AHZ1 1483 aa28.35■■■□□ 2.13
VGLL3-201ENST00000383698 PIK3C2GO75747 1445 aa28.35■■■□□ 2.13
VGLL3-201ENST00000383698 GGT6Q6P531 493 aa28.33■■■□□ 2.13
VGLL3-201ENST00000383698 NOS1P29475 1434 aa28.33■■■□□ 2.13
VGLL3-201ENST00000383698 IFT172Q9UG01 1749 aa28.33■■■□□ 2.13
VGLL3-201ENST00000383698 DUSP27Q5VZP5 1158 aa28.32■■■□□ 2.12
VGLL3-201ENST00000383698 CARD14Q9BXL6 1004 aa28.32■■■□□ 2.12
VGLL3-201ENST00000383698 NPM1P06748 294 aaKnown RBP eCLIP28.32■■■□□ 2.12
VGLL3-201ENST00000383698 CFAP65Q6ZU64 1925 aaKnown RBP28.32■■■□□ 2.12
VGLL3-201ENST00000383698 SKAP1Q86WV1 359 aa28.31■■■□□ 2.12
VGLL3-201ENST00000383698 NPC1L1Q9UHC9 1359 aa28.3■■■□□ 2.12
VGLL3-201ENST00000383698 GOLGA2Q08379 1002 aa28.29■■■□□ 2.12
VGLL3-201ENST00000383698 ZNF521Q96K83 1311 aa28.29■■■□□ 2.12
VGLL3-201ENST00000383698 TCERG1O14776 1098 aaKnown RBP28.29■■■□□ 2.12
VGLL3-201ENST00000383698 NPM2Q86SE8 214 aaKnown RBP28.28■■■□□ 2.12
VGLL3-201ENST00000383698 IPO9Q96P70 1041 aaKnown RBP28.28■■■□□ 2.12
VGLL3-201ENST00000383698 TRAK1Q9UPV9 953 aa28.28■■■□□ 2.12
VGLL3-201ENST00000383698 LMTK2Q8IWU2 1503 aa28.27■■■□□ 2.12
VGLL3-201ENST00000383698 CD109Q6YHK3 1445 aa28.26■■■□□ 2.12
VGLL3-201ENST00000383698 NPATQ14207 1427 aa28.26■■■□□ 2.11
VGLL3-201ENST00000383698 NRXN1Q9ULB1 1477 aa28.26■■■□□ 2.11
VGLL3-201ENST00000383698 ADGRB3O60242 1522 aa28.26■■■□□ 2.11
VGLL3-201ENST00000383698 APAF1O14727 1248 aa28.25■■■□□ 2.11
VGLL3-201ENST00000383698 POGZQ7Z3K3 1410 aa28.25■■■□□ 2.11
VGLL3-201ENST00000383698 CENPJQ9HC77 1338 aaPredicted RBP28.24■■■□□ 2.11
VGLL3-201ENST00000383698 FRMPD1Q5SYB0 1578 aa28.24■■■□□ 2.11
VGLL3-201ENST00000383698 PDE4AP27815 886 aa28.23■■■□□ 2.11
VGLL3-201ENST00000383698 TMEM132EQ6IEE7 984 aa28.23■■■□□ 2.11
VGLL3-201ENST00000383698 SLC24A1O60721 1099 aa28.22■■■□□ 2.11
VGLL3-201ENST00000383698 SPINK5Q9NQ38 1064 aaPredicted RBP28.21■■■□□ 2.11
VGLL3-201ENST00000383698 SLFN5Q08AF3 891 aa28.2■■■□□ 2.11
VGLL3-201ENST00000383698 NBR1Q14596 966 aa28.19■■■□□ 2.1
VGLL3-201ENST00000383698 NUTM2DQ5VT03 806 aaPredicted RBP28.19■■■□□ 2.1
VGLL3-201ENST00000383698 MYO3AQ8NEV4 1616 aa28.19■■■□□ 2.1
VGLL3-201ENST00000383698 TNNT2P45379 298 aaPredicted RBP28.18■■■□□ 2.1
VGLL3-201ENST00000383698 ZBTB47Q9UFB7 747 aaPredicted RBP28.18■■■□□ 2.1
VGLL3-201ENST00000383698 HECW2Q9P2P5 1572 aa28.17■■■□□ 2.1
VGLL3-201ENST00000383698 BACH2Q9BYV9 841 aa28.16■■■□□ 2.1
VGLL3-201ENST00000383698 OSCARQ8IYS5 282 aa28.16■■■□□ 2.1
VGLL3-201ENST00000383698 SLC12A5Q9H2X9 1139 aa28.16■■■□□ 2.1
VGLL3-201ENST00000383698 SBNO2Q9Y2G9 1366 aa28.15■■■□□ 2.1
VGLL3-201ENST00000383698 NSD3Q9BZ95 1437 aa28.15■■■□□ 2.1
VGLL3-201ENST00000383698 RAPGEF3O95398 923 aa28.15■■■□□ 2.1
VGLL3-201ENST00000383698 PPLO60437 1756 aa28.15■■■□□ 2.1
VGLL3-201ENST00000383698 MLH3Q9UHC1 1453 aa28.15■■■□□ 2.1
VGLL3-201ENST00000383698 C14orf93Q9H972 538 aaKnown RBP28.15■■■□□ 2.1
VGLL3-201ENST00000383698 SETBP1Q9Y6X0 1596 aa28.15■■■□□ 2.1
VGLL3-201ENST00000383698 MS4A1P11836 297 aa28.14■■■□□ 2.1
VGLL3-201ENST00000383698 DMRT2Q9Y5R5 561 aa28.14■■■□□ 2.09
VGLL3-201ENST00000383698 CFAP74Q9C0B2 1584 aa28.14■■■□□ 2.09
VGLL3-201ENST00000383698 QRICH2Q9H0J4 1663 aa28.12■■■□□ 2.09
VGLL3-201ENST00000383698 SENP3Q9H4L4 574 aaPredicted RBP28.12■■■□□ 2.09
VGLL3-201ENST00000383698 ABCC3O15438 1527 aa28.12■■■□□ 2.09
VGLL3-201ENST00000383698 TRMT2AQ8IZ69 625 aaKnown RBP28.11■■■□□ 2.09
VGLL3-201ENST00000383698 ADGRB1O14514 1584 aa28.1■■■□□ 2.09
VGLL3-201ENST00000383698 MORC1Q86VD1 984 aa28.1■■■□□ 2.09
VGLL3-201ENST00000383698 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.1■■■□□ 2.09
VGLL3-201ENST00000383698 KDM2BQ8NHM5 1336 aa28.09■■■□□ 2.09
VGLL3-201ENST00000383698 BCAR3O75815 825 aa28.08■■■□□ 2.09
VGLL3-201ENST00000383698 NKTRP30414 1462 aaKnown RBP28.08■■■□□ 2.09
VGLL3-201ENST00000383698 ZC3H13Q5T200 1668 aaKnown RBP28.08■■■□□ 2.09
VGLL3-201ENST00000383698 SIGLEC1Q9BZZ2 1709 aa28.06■■■□□ 2.08
VGLL3-201ENST00000383698 E9PSI1 815 aa28.05■■■□□ 2.08
VGLL3-201ENST00000383698 POLR3AO14802 1390 aaPredicted RBP28.05■■■□□ 2.08
VGLL3-201ENST00000383698 CAMSAP1Q5T5Y3 1602 aa28.05■■■□□ 2.08
VGLL3-201ENST00000383698 NEUROD2Q15784 382 aa28.04■■■□□ 2.08
VGLL3-201ENST00000383698 RPGRIP1LQ68CZ1 1315 aa28.03■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms