RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 CENPJQ9HC77 1338 aaPredicted RBP17.38■□□□□ 0.37
SNPH-201ENST00000381867 NOC3LQ8WTT2 800 aaKnown RBP17.37■□□□□ 0.37
SNPH-201ENST00000381867 TMX4Q9H1E5 349 aaPredicted RBP17.37■□□□□ 0.37
SNPH-201ENST00000381867 CD109Q6YHK3 1445 aa17.36■□□□□ 0.37
SNPH-201ENST00000381867 AMPHP49418 695 aa17.36■□□□□ 0.37
SNPH-201ENST00000381867 COG3Q96JB2 828 aa17.36■□□□□ 0.37
SNPH-201ENST00000381867 HDAC5Q9UQL6 1122 aa17.35■□□□□ 0.37
SNPH-201ENST00000381867 NGEFQ8N5V2 710 aa17.35■□□□□ 0.37
SNPH-201ENST00000381867 RPGRIP1LQ68CZ1 1315 aa17.35■□□□□ 0.37
SNPH-201ENST00000381867 PLB1Q6P1J6 1458 aa17.34■□□□□ 0.37
SNPH-201ENST00000381867 SMC4Q9NTJ3 1288 aa17.34■□□□□ 0.37
SNPH-201ENST00000381867 CLSTN1O94985 981 aa17.34■□□□□ 0.37
SNPH-201ENST00000381867 VSIG10Q8N0Z9 540 aa17.34■□□□□ 0.37
SNPH-201ENST00000381867 CCDC34Q96HJ3 373 aa17.33■□□□□ 0.37
SNPH-201ENST00000381867 FOXD4L1Q9NU39 408 aa17.33■□□□□ 0.37
SNPH-201ENST00000381867 FANCIQ9NVI1 1328 aa17.33■□□□□ 0.37
SNPH-201ENST00000381867 WDR97A6NE52 1622 aa17.33■□□□□ 0.37
SNPH-201ENST00000381867 PANK3Q9H999 370 aa17.33■□□□□ 0.36
SNPH-201ENST00000381867 ST18O60284 1047 aa17.33■□□□□ 0.36
SNPH-201ENST00000381867 HMMRO75330 724 aa17.32■□□□□ 0.36
SNPH-201ENST00000381867 PDE4AP27815 886 aa17.32■□□□□ 0.36
SNPH-201ENST00000381867 FAM161AQ3B820 660 aa17.31■□□□□ 0.36
SNPH-201ENST00000381867 CAMSAP2Q08AD1 1489 aa17.31■□□□□ 0.36
SNPH-201ENST00000381867 SKOR2Q2VWA4 1001 aaPredicted RBP17.31■□□□□ 0.36
SNPH-201ENST00000381867 CENPQQ7L2Z9 268 aaPredicted RBP17.31■□□□□ 0.36
SNPH-201ENST00000381867 ARHGEF11O15085 1522 aa17.31■□□□□ 0.36
SNPH-201ENST00000381867 WDR62O43379 1518 aa17.3■□□□□ 0.36
SNPH-201ENST00000381867 ADAMTS12P58397 1594 aa17.3■□□□□ 0.36
SNPH-201ENST00000381867 THEMISQ8N1K5 641 aaPredicted RBP17.3■□□□□ 0.36
SNPH-201ENST00000381867 TRIM6-TRIM34B2RNG4 842 aa17.3■□□□□ 0.36
SNPH-201ENST00000381867 GPATCH3Q96I76 525 aa17.3■□□□□ 0.36
SNPH-201ENST00000381867 MINK1Q8N4C8 1332 aaPredicted RBP17.29■□□□□ 0.36
SNPH-201ENST00000381867 HSP90B1P14625 803 aaKnown RBP17.29■□□□□ 0.36
SNPH-201ENST00000381867 ADGRL1O94910 1474 aa17.29■□□□□ 0.36
SNPH-201ENST00000381867 PTPN23Q9H3S7 1636 aa17.29■□□□□ 0.36
SNPH-201ENST00000381867 STK31Q9BXU1 1019 aa17.28■□□□□ 0.36
SNPH-201ENST00000381867 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.28■□□□□ 0.36
SNPH-201ENST00000381867 CLUAP1Q96AJ1 413 aa17.28■□□□□ 0.36
SNPH-201ENST00000381867 ANKRD30BQ9BXX2 1392 aa17.27■□□□□ 0.36
SNPH-201ENST00000381867 PPP6R1Q9UPN7 881 aa17.27■□□□□ 0.35
SNPH-201ENST00000381867 DDX49Q9Y6V7 483 aaKnown RBP17.27■□□□□ 0.35
SNPH-201ENST00000381867 NOL8Q76FK4 1167 aaKnown RBP17.26■□□□□ 0.35
SNPH-201ENST00000381867 NUTM2FA1L443 756 aa17.26■□□□□ 0.35
SNPH-201ENST00000381867 RAPGEF6Q8TEU7 1601 aa17.26■□□□□ 0.35
SNPH-201ENST00000381867 UGGT2Q9NYU1 1516 aa17.25■□□□□ 0.35
SNPH-201ENST00000381867 CTTNBP2Q8WZ74 1663 aa17.25■□□□□ 0.35
SNPH-201ENST00000381867 NCBP3Q53F19 620 aaKnown RBP17.25■□□□□ 0.35
SNPH-201ENST00000381867 A0A0U1RQG5 324 aaPredicted RBP17.25■□□□□ 0.35
SNPH-201ENST00000381867 CHMP3Q9Y3E7 222 aa17.25■□□□□ 0.35
SNPH-201ENST00000381867 KIF16BQ96L93 1317 aa17.25■□□□□ 0.35
SNPH-201ENST00000381867 TPM3P06753 285 aa17.25■□□□□ 0.35
SNPH-201ENST00000381867 GORABQ5T7V8 394 aa17.24■□□□□ 0.35
SNPH-201ENST00000381867 TAF7LQ5H9L4 462 aa17.24■□□□□ 0.35
SNPH-201ENST00000381867 SLC4A3P48751 1232 aa17.24■□□□□ 0.35
SNPH-201ENST00000381867 CCDC146Q8IYE0 955 aa17.23■□□□□ 0.35
SNPH-201ENST00000381867 LTV1Q96GA3 475 aaPredicted RBP17.23■□□□□ 0.35
SNPH-201ENST00000381867 KIF21AQ7Z4S6 1674 aa17.23■□□□□ 0.35
SNPH-201ENST00000381867 AKNAQ7Z591 1439 aa17.23■□□□□ 0.35
SNPH-201ENST00000381867 G3V3G9 751 aa17.23■□□□□ 0.35
SNPH-201ENST00000381867 DCAF8Q5TAQ9 597 aa17.23■□□□□ 0.35
SNPH-201ENST00000381867 CCDC7Q96M83 1385 aa17.22■□□□□ 0.35
SNPH-201ENST00000381867 PRKRIP1Q9H875 184 aaPredicted RBP17.22■□□□□ 0.35
SNPH-201ENST00000381867 KIF3AQ9Y496 699 aa17.22■□□□□ 0.35
SNPH-201ENST00000381867 DENND4BO75064 1496 aaPredicted RBP17.22■□□□□ 0.35
SNPH-201ENST00000381867 ATF3P18847 181 aa17.22■□□□□ 0.35
SNPH-201ENST00000381867 SETQ01105 290 aaPredicted RBP17.22■□□□□ 0.35
SNPH-201ENST00000381867 NAIPQ13075 1403 aa17.21■□□□□ 0.35
SNPH-201ENST00000381867 RRP1P56182 461 aaKnown RBP17.21■□□□□ 0.35
SNPH-201ENST00000381867 FOXD4L5Q5VV16 416 aaPredicted RBP17.21■□□□□ 0.35
SNPH-201ENST00000381867 FOXD4L4Q8WXT5 416 aaPredicted RBP17.21■□□□□ 0.35
SNPH-201ENST00000381867 TXNDC2Q86VQ3 553 aa17.21■□□□□ 0.34
SNPH-201ENST00000381867 RAPGEF3O95398 923 aa17.2■□□□□ 0.34
SNPH-201ENST00000381867 ZBED9Q6R2W3 1325 aa17.2■□□□□ 0.34
SNPH-201ENST00000381867 TEX14Q8IWB6 1497 aa17.2■□□□□ 0.34
SNPH-201ENST00000381867 ABCC5O15440 1437 aa17.2■□□□□ 0.34
SNPH-201ENST00000381867 ATP6V1DQ9Y5K8 247 aa17.19■□□□□ 0.34
SNPH-201ENST00000381867 PSME1Q06323 249 aa17.19■□□□□ 0.34
SNPH-201ENST00000381867 GTF2E1P29083 439 aaPredicted RBP17.19■□□□□ 0.34
SNPH-201ENST00000381867 EXOC6Q8TAG9 804 aa17.19■□□□□ 0.34
SNPH-201ENST00000381867 WASHC2AQ641Q2 1341 aa17.18■□□□□ 0.34
SNPH-201ENST00000381867 FANCAO15360 1455 aa17.18■□□□□ 0.34
SNPH-201ENST00000381867 ZNF771Q7L3S4 317 aaPredicted RBP17.18■□□□□ 0.34
SNPH-201ENST00000381867 EIF4G3O43432 1585 aaKnown RBP17.18■□□□□ 0.34
SNPH-201ENST00000381867 CNTLNQ9NXG0 1405 aa17.17■□□□□ 0.34
SNPH-201ENST00000381867 SF3A1Q15459 793 aaKnown RBP17.17■□□□□ 0.34
SNPH-201ENST00000381867 ITSN2Q9NZM3 1697 aa17.17■□□□□ 0.34
SNPH-201ENST00000381867 GOLGA6L19H0YKK7 550 aa17.17■□□□□ 0.34
SNPH-201ENST00000381867 GPS2Q13227 327 aa17.17■□□□□ 0.34
SNPH-201ENST00000381867 C1orf141Q5JVX7 400 aa17.16■□□□□ 0.34
SNPH-201ENST00000381867 DIAPH1O60610 1272 aaKnown RBP17.16■□□□□ 0.34
SNPH-201ENST00000381867 KIAA0556O60303 1618 aa17.16■□□□□ 0.34
SNPH-201ENST00000381867 SLC4A10Q6U841 1118 aa17.16■□□□□ 0.34
SNPH-201ENST00000381867 ERBINQ96RT1 1412 aa17.16■□□□□ 0.34
SNPH-201ENST00000381867 RASSF8Q8NHQ8 419 aa17.16■□□□□ 0.34
SNPH-201ENST00000381867 AEBP2Q6ZN18 517 aaPredicted RBP17.15■□□□□ 0.34
SNPH-201ENST00000381867 CRBNQ96SW2 442 aa17.15■□□□□ 0.34
SNPH-201ENST00000381867 GPRASP1Q5JY77 1395 aa17.15■□□□□ 0.34
SNPH-201ENST00000381867 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.15■□□□□ 0.34
SNPH-201ENST00000381867 KIF7Q2M1P5 1343 aa17.15■□□□□ 0.34
SNPH-201ENST00000381867 E9PSI1 815 aa17.14■□□□□ 0.33
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