RNA–Protein interactions for RNA: ENST00000381254.6

GEN1-202, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 5 BASIC

Gene GEN1, Length 6,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-202ENST00000381254 CPS1P31327 1500 aa7.2□□□□□ -1.26
GEN1-202ENST00000381254 PPP4R2Q9NY27 417 aa7.19□□□□□ -1.26
GEN1-202ENST00000381254 APBA3O96018 575 aa7.19□□□□□ -1.26
GEN1-202ENST00000381254 SYTL4Q96C24 671 aaPredicted RBP7.19□□□□□ -1.26
GEN1-202ENST00000381254 USP35Q9P2H5 1018 aa7.19□□□□□ -1.26
GEN1-202ENST00000381254 ATP10BO94823 1461 aa7.19□□□□□ -1.26
GEN1-202ENST00000381254 A2MP01023 1474 aa7.19□□□□□ -1.26
GEN1-202ENST00000381254 FBXO31Q5XUX0 539 aaPredicted RBP7.19□□□□□ -1.26
GEN1-202ENST00000381254 GIGYF1O75420 1035 aaPredicted RBP7.19□□□□□ -1.26
GEN1-202ENST00000381254 MRS2Q9HD23 443 aa7.19□□□□□ -1.26
GEN1-202ENST00000381254 PMFBP1Q8TBY8 1022 aa7.18□□□□□ -1.26
GEN1-202ENST00000381254 GOLGA6L22H0YM25 854 aa7.18□□□□□ -1.26
GEN1-202ENST00000381254 ZCCHC11Q5TAX3 1644 aaKnown RBP7.18□□□□□ -1.26
GEN1-202ENST00000381254 NCOA2Q15596 1464 aa7.18□□□□□ -1.26
GEN1-202ENST00000381254 ADCY10Q96PN6 1610 aa7.18□□□□□ -1.26
GEN1-202ENST00000381254 SETD5Q9C0A6 1442 aa7.18□□□□□ -1.26
GEN1-202ENST00000381254 KRT27Q7Z3Y8 459 aa7.17□□□□□ -1.26
GEN1-202ENST00000381254 SAFB2Q14151 953 aaKnown RBP eCLIP7.17□□□□□ -1.26
GEN1-202ENST00000381254 AMOTL2Q9Y2J4 779 aa7.17□□□□□ -1.26
GEN1-202ENST00000381254 IQSEC2Q5JU85 1478 aa7.17□□□□□ -1.26
GEN1-202ENST00000381254 KIF21BO75037 1637 aa7.17□□□□□ -1.26
GEN1-202ENST00000381254 FKBP8Q14318 412 aa7.16□□□□□ -1.26
GEN1-202ENST00000381254 BIVM-ERCC5R4GMW8 1640 aa7.16□□□□□ -1.26
GEN1-202ENST00000381254 RAPGEF6Q8TEU7 1601 aa7.16□□□□□ -1.26
GEN1-202ENST00000381254 MYH16Q9H6N6 1097 aa7.16□□□□□ -1.26
GEN1-202ENST00000381254 AAMPQ13685 434 aa7.16□□□□□ -1.26
GEN1-202ENST00000381254 TOM1L2Q6ZVM7 507 aa7.15□□□□□ -1.26
GEN1-202ENST00000381254 G3V3G9 751 aa7.15□□□□□ -1.26
GEN1-202ENST00000381254 DCAF8Q5TAQ9 597 aa7.15□□□□□ -1.26
GEN1-202ENST00000381254 KDM2AQ9Y2K7 1162 aa7.15□□□□□ -1.26
GEN1-202ENST00000381254 DHX29Q7Z478 1369 aaKnown RBP7.15□□□□□ -1.26
GEN1-202ENST00000381254 SOX12O15370 315 aa7.15□□□□□ -1.26
GEN1-202ENST00000381254 FAM83GA6ND36 823 aa7.15□□□□□ -1.27
GEN1-202ENST00000381254 GRIN3BO60391 1043 aa7.15□□□□□ -1.27
GEN1-202ENST00000381254 TMEM94Q12767 1356 aa7.15□□□□□ -1.27
GEN1-202ENST00000381254 FAM196AQ6ZSG2 479 aa7.14□□□□□ -1.27
GEN1-202ENST00000381254 HDGFL2Q7Z4V5 671 aaPredicted RBP7.14□□□□□ -1.27
GEN1-202ENST00000381254 ARHGAP35Q9NRY4 1499 aa7.14□□□□□ -1.27
GEN1-202ENST00000381254 SHANK2Q9UPX8 1470 aa7.14□□□□□ -1.27
GEN1-202ENST00000381254 MIA2Q96PC5 1412 aa7.14□□□□□ -1.27
GEN1-202ENST00000381254 NLRP1Q9C000 1473 aa7.14□□□□□ -1.27
GEN1-202ENST00000381254 DDX10Q13206 875 aaKnown RBP7.14□□□□□ -1.27
GEN1-202ENST00000381254 RALBP1Q15311 655 aa7.14□□□□□ -1.27
GEN1-202ENST00000381254 KTN1Q86UP2 1357 aaKnown RBP7.13□□□□□ -1.27
GEN1-202ENST00000381254 NUDCQ9Y266 331 aa7.13□□□□□ -1.27
GEN1-202ENST00000381254 NUP155O75694 1391 aa7.13□□□□□ -1.27
GEN1-202ENST00000381254 CAPN15O75808 1086 aa7.13□□□□□ -1.27
GEN1-202ENST00000381254 A2ML1A8K2U0 1454 aa7.13□□□□□ -1.27
GEN1-202ENST00000381254 KRT28Q7Z3Y7 464 aa7.13□□□□□ -1.27
GEN1-202ENST00000381254 HDAC5Q9UQL6 1122 aa7.12□□□□□ -1.27
GEN1-202ENST00000381254 MADDQ8WXG6 1647 aa7.12□□□□□ -1.27
GEN1-202ENST00000381254 HSP90AA1P07900 732 aaKnown RBP7.12□□□□□ -1.27
GEN1-202ENST00000381254 CAMSAP1Q5T5Y3 1602 aa7.11□□□□□ -1.27
GEN1-202ENST00000381254 DHX57Q6P158 1386 aaKnown RBP7.11□□□□□ -1.27
GEN1-202ENST00000381254 KIF15Q9NS87 1388 aa7.11□□□□□ -1.27
GEN1-202ENST00000381254 NLRP13Q86W25 1043 aa7.11□□□□□ -1.27
GEN1-202ENST00000381254 PSDA5PKW4 1024 aaPredicted RBP7.11□□□□□ -1.27
GEN1-202ENST00000381254 MYOM3Q5VTT5 1437 aa7.11□□□□□ -1.27
GEN1-202ENST00000381254 CALD1Q05682 793 aaKnown RBP7.11□□□□□ -1.27
GEN1-202ENST00000381254 GPBP1L1Q9HC44 474 aaPredicted RBP7.11□□□□□ -1.27
GEN1-202ENST00000381254 ARHGEF40Q8TER5 1519 aa7.1□□□□□ -1.27
GEN1-202ENST00000381254 CDCA7Q9BWT1 371 aaPredicted RBP7.1□□□□□ -1.27
GEN1-202ENST00000381254 WDHD1O75717 1129 aaPredicted RBP7.1□□□□□ -1.27
GEN1-202ENST00000381254 KNSTRNQ9Y448 316 aa7.1□□□□□ -1.27
GEN1-202ENST00000381254 TBX22Q9Y458 520 aa7.1□□□□□ -1.27
GEN1-202ENST00000381254 SHROOM2Q13796 1616 aa7.1□□□□□ -1.27
GEN1-202ENST00000381254 UGGT1Q9NYU2 1555 aa7.1□□□□□ -1.27
GEN1-202ENST00000381254 EXOC5O00471 708 aa7.09□□□□□ -1.27
GEN1-202ENST00000381254 GTF2E1P29083 439 aaPredicted RBP7.09□□□□□ -1.27
GEN1-202ENST00000381254 NCOA1Q15788 1441 aa7.09□□□□□ -1.27
GEN1-202ENST00000381254 CCDC141Q6ZP82 1450 aa7.09□□□□□ -1.27
GEN1-202ENST00000381254 NCLP19338 710 aaKnown RBP7.09□□□□□ -1.27
GEN1-202ENST00000381254 XPCQ01831 940 aaPredicted RBP7.09□□□□□ -1.27
GEN1-202ENST00000381254 UPF1Q92900 1129 aaKnown RBP eCLIP7.09□□□□□ -1.27
GEN1-202ENST00000381254 CASC1Q6TDU7 716 aa7.09□□□□□ -1.27
GEN1-202ENST00000381254 UNC5CLQ8IV45 518 aa7.09□□□□□ -1.27
GEN1-202ENST00000381254 SCAF11Q99590 1463 aaKnown RBP7.09□□□□□ -1.28
GEN1-202ENST00000381254 NLRP2Q9NX02 1062 aa7.09□□□□□ -1.28
GEN1-202ENST00000381254 SEPT12Q8IYM1 358 aa7.08□□□□□ -1.28
GEN1-202ENST00000381254 MIER1Q8N108 512 aa7.08□□□□□ -1.28
GEN1-202ENST00000381254 R3HDM1Q15032 1099 aaKnown RBP7.08□□□□□ -1.28
GEN1-202ENST00000381254 TCERG1O14776 1098 aaKnown RBP7.08□□□□□ -1.28
GEN1-202ENST00000381254 AMPHP49418 695 aa7.08□□□□□ -1.28
GEN1-202ENST00000381254 TMF1P82094 1093 aa7.08□□□□□ -1.28
GEN1-202ENST00000381254 HIRIP3Q9BW71 556 aaPredicted RBP7.08□□□□□ -1.28
GEN1-202ENST00000381254 PHF8Q9UPP1 1060 aa7.08□□□□□ -1.28
GEN1-202ENST00000381254 FOXO3O43524 673 aa7.08□□□□□ -1.28
GEN1-202ENST00000381254 L1TD1Q5T7N2 865 aaKnown RBP7.08□□□□□ -1.28
GEN1-202ENST00000381254 DISP1Q96F81 1524 aa7.07□□□□□ -1.28
GEN1-202ENST00000381254 RPGRIP1LQ68CZ1 1315 aa7.07□□□□□ -1.28
GEN1-202ENST00000381254 FAM98CQ17RN3 349 aaKnown RBP7.07□□□□□ -1.28
GEN1-202ENST00000381254 ABTB2Q8N961 1025 aa7.07□□□□□ -1.28
GEN1-202ENST00000381254 CHMP4CQ96CF2 233 aa7.07□□□□□ -1.28
GEN1-202ENST00000381254 CASKIN1Q8WXD9 1431 aa7.07□□□□□ -1.28
GEN1-202ENST00000381254 TFCP2L1Q9NZI6 479 aa7.07□□□□□ -1.28
GEN1-202ENST00000381254 ANKRD30BQ9BXX2 1392 aa7.07□□□□□ -1.28
GEN1-202ENST00000381254 RAPGEF4Q8WZA2 1011 aa7.06□□□□□ -1.28
GEN1-202ENST00000381254 TRIM44Q96DX7 344 aaPredicted RBP7.06□□□□□ -1.28
GEN1-202ENST00000381254 AK7Q96M32 723 aa7.06□□□□□ -1.28
GEN1-202ENST00000381254 CLEC11AQ9Y240 323 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms