RNA–Protein interactions for RNA: ENST00000381112.7

CCM2-202, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 1,881 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-202ENST00000381112 NEXMIFQ5QGS0 1516 aa27.56■■■□□ 2
CCM2-202ENST00000381112 WASHC2AQ641Q2 1341 aa27.55■■■□□ 2
CCM2-202ENST00000381112 TNRQ92752 1358 aa27.54■■■□□ 2
CCM2-202ENST00000381112 C11orf95C9JLR9 678 aaPredicted RBP27.53■■■□□ 2
CCM2-202ENST00000381112 DDX10Q13206 875 aaKnown RBP27.53■■■□□ 2
CCM2-202ENST00000381112 KIAA1210Q9ULL0 1709 aa27.53■■■□□ 2
CCM2-202ENST00000381112 PIK3C2GO75747 1445 aa27.53■■■□□ 2
CCM2-202ENST00000381112 ST20-MTHFSA0A0A6YYL1 179 aa27.51■■□□□ 1.99
CCM2-202ENST00000381112 VGFO15240 615 aaPredicted RBP27.51■■□□□ 1.99
CCM2-202ENST00000381112 ZFYVE9O95405 1425 aa27.51■■□□□ 1.99
CCM2-202ENST00000381112 CFAP70Q5T0N1 1121 aa27.51■■□□□ 1.99
CCM2-202ENST00000381112 A2ML1A8K2U0 1454 aa27.5■■□□□ 1.99
CCM2-202ENST00000381112 FER1L4A9Z1Z3 1794 aa27.5■■□□□ 1.99
CCM2-202ENST00000381112 STAG3Q9UJ98 1225 aa27.5■■□□□ 1.99
CCM2-202ENST00000381112 CCDC7Q96M83 1385 aa27.49■■□□□ 1.99
CCM2-202ENST00000381112 CEBPAP49715 358 aaPredicted RBP27.49■■□□□ 1.99
CCM2-202ENST00000381112 MYO5BQ9ULV0 1848 aa27.46■■□□□ 1.99
CCM2-202ENST00000381112 C14orf93Q9H972 538 aaKnown RBP27.46■■□□□ 1.99
CCM2-202ENST00000381112 NUTM2DQ5VT03 806 aaPredicted RBP27.45■■□□□ 1.99
CCM2-202ENST00000381112 KIF7Q2M1P5 1343 aa27.45■■□□□ 1.98
CCM2-202ENST00000381112 C3P01024 1663 aa27.45■■□□□ 1.98
CCM2-202ENST00000381112 SCAF11Q99590 1463 aaKnown RBP27.44■■□□□ 1.98
CCM2-202ENST00000381112 MIER1Q8N108 512 aa27.43■■□□□ 1.98
CCM2-202ENST00000381112 SETBP1Q9Y6X0 1596 aa27.41■■□□□ 1.98
CCM2-202ENST00000381112 IQGAP1P46940 1657 aa27.41■■□□□ 1.98
CCM2-202ENST00000381112 NLRP1Q9C000 1473 aa27.41■■□□□ 1.98
CCM2-202ENST00000381112 RIMS2Q9UQ26 1411 aa27.39■■□□□ 1.97
CCM2-202ENST00000381112 TESK2Q96S53 571 aa27.38■■□□□ 1.97
CCM2-202ENST00000381112 ADAMTSL3P82987 1691 aa27.38■■□□□ 1.97
CCM2-202ENST00000381112 KDM5AP29375 1690 aaKnown RBP27.38■■□□□ 1.97
CCM2-202ENST00000381112 ADGRB1O14514 1584 aa27.38■■□□□ 1.97
CCM2-202ENST00000381112 POLR1AO95602 1720 aaPredicted RBP27.37■■□□□ 1.97
CCM2-202ENST00000381112 EIF3AQ14152 1382 aaKnown RBP27.34■■□□□ 1.97
CCM2-202ENST00000381112 RIMS1Q86UR5 1692 aaKnown RBP27.33■■□□□ 1.97
CCM2-202ENST00000381112 PLPPR3Q6T4P5 718 aa27.33■■□□□ 1.97
CCM2-202ENST00000381112 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.32■■□□□ 1.96
CCM2-202ENST00000381112 UBR1Q8IWV7 1749 aa27.32■■□□□ 1.96
CCM2-202ENST00000381112 TMEM2Q9UHN6 1383 aa27.31■■□□□ 1.96
CCM2-202ENST00000381112 TMEM132EQ6IEE7 984 aa27.31■■□□□ 1.96
CCM2-202ENST00000381112 HDGFP51858 240 aaKnown RBP27.27■■□□□ 1.96
CCM2-202ENST00000381112 DISP3Q9P2K9 1392 aa27.26■■□□□ 1.96
CCM2-202ENST00000381112 TMF1P82094 1093 aa27.26■■□□□ 1.95
CCM2-202ENST00000381112 ASXL1Q8IXJ9 1541 aa27.26■■□□□ 1.95
CCM2-202ENST00000381112 ALKQ9UM73 1620 aa27.25■■□□□ 1.95
CCM2-202ENST00000381112 POLR3GLQ9BT43 218 aa27.25■■□□□ 1.95
CCM2-202ENST00000381112 SENP3Q9H4L4 574 aaPredicted RBP27.23■■□□□ 1.95
CCM2-202ENST00000381112 TRAK1Q9UPV9 953 aa27.23■■□□□ 1.95
CCM2-202ENST00000381112 MYO3AQ8NEV4 1616 aa27.23■■□□□ 1.95
CCM2-202ENST00000381112 SBNO2Q9Y2G9 1366 aa27.2■■□□□ 1.95
CCM2-202ENST00000381112 ARHGAP23Q9P227 1491 aa27.2■■□□□ 1.94
CCM2-202ENST00000381112 CENPJQ9HC77 1338 aaPredicted RBP27.19■■□□□ 1.94
CCM2-202ENST00000381112 SLC24A1O60721 1099 aa27.19■■□□□ 1.94
CCM2-202ENST00000381112 SLIT1O75093 1534 aa27.19■■□□□ 1.94
CCM2-202ENST00000381112 PTPRMP28827 1452 aa27.19■■□□□ 1.94
CCM2-202ENST00000381112 THEMISQ8N1K5 641 aaPredicted RBP27.19■■□□□ 1.94
CCM2-202ENST00000381112 ANP32CO43423 234 aa27.18■■□□□ 1.94
CCM2-202ENST00000381112 LTKP29376 864 aa27.17■■□□□ 1.94
CCM2-202ENST00000381112 NRXN3Q9Y4C0 1643 aa27.17■■□□□ 1.94
CCM2-202ENST00000381112 YTHDC2Q9H6S0 1430 aaKnown RBP27.16■■□□□ 1.94
CCM2-202ENST00000381112 CEP170BQ9Y4F5 1589 aaPredicted RBP27.16■■□□□ 1.94
CCM2-202ENST00000381112 CDCA8Q53HL2 280 aa27.15■■□□□ 1.94
CCM2-202ENST00000381112 TXNDC2Q86VQ3 553 aa27.14■■□□□ 1.94
CCM2-202ENST00000381112 PLEKHG1Q9ULL1 1385 aa27.14■■□□□ 1.94
CCM2-202ENST00000381112 EID1Q9Y6B2 187 aa27.13■■□□□ 1.93
CCM2-202ENST00000381112 SETD1AO15047 1707 aaKnown RBP27.13■■□□□ 1.93
CCM2-202ENST00000381112 STK26Q9P289 416 aa27.13■■□□□ 1.93
CCM2-202ENST00000381112 ARHGEF28Q8N1W1 1705 aaKnown RBP27.11■■□□□ 1.93
CCM2-202ENST00000381112 LRPPRCP42704 1394 aaKnown RBP27.09■■□□□ 1.93
CCM2-202ENST00000381112 METP08581 1390 aa27.09■■□□□ 1.93
CCM2-202ENST00000381112 ADAMTS13Q76LX8 1427 aa27.09■■□□□ 1.93
CCM2-202ENST00000381112 QRICH2Q9H0J4 1663 aa27.08■■□□□ 1.93
CCM2-202ENST00000381112 ZNF142P52746 1687 aaPredicted RBP27.07■■□□□ 1.92
CCM2-202ENST00000381112 BCANQ96GW7 911 aa27.06■■□□□ 1.92
CCM2-202ENST00000381112 ABCC11Q96J66 1382 aa27.06■■□□□ 1.92
CCM2-202ENST00000381112 DLC1Q96QB1 1528 aa27.04■■□□□ 1.92
CCM2-202ENST00000381112 MED14O60244 1454 aa27.04■■□□□ 1.92
CCM2-202ENST00000381112 PRAM1Q96QH2 718 aa27.03■■□□□ 1.92
CCM2-202ENST00000381112 SETD1BQ9UPS6 1966 aaKnown RBP27.03■■□□□ 1.92
CCM2-202ENST00000381112 CCER2I3L3R5 266 aa27.02■■□□□ 1.92
CCM2-202ENST00000381112 PRKRIP1Q9H875 184 aaPredicted RBP27.01■■□□□ 1.91
CCM2-202ENST00000381112 POGKQ9P215 609 aa27■■□□□ 1.91
CCM2-202ENST00000381112 TECPR2O15040 1411 aa26.99■■□□□ 1.91
CCM2-202ENST00000381112 PANK3Q9H999 370 aa26.99■■□□□ 1.91
CCM2-202ENST00000381112 PER1O15534 1290 aaPredicted RBP26.98■■□□□ 1.91
CCM2-202ENST00000381112 SAFB2Q14151 953 aaKnown RBP eCLIP26.98■■□□□ 1.915e-8■■■□□ 18
CCM2-202ENST00000381112 PUS7Q96PZ0 661 aaKnown RBP26.98■■□□□ 1.91
CCM2-202ENST00000381112 TBX22Q9Y458 520 aa26.98■■□□□ 1.91
CCM2-202ENST00000381112 EVC2Q86UK5 1308 aa26.97■■□□□ 1.91
CCM2-202ENST00000381112 TULP4Q9NRJ4 1543 aa26.97■■□□□ 1.91
CCM2-202ENST00000381112 SLC26A8Q96RN1 970 aa26.97■■□□□ 1.91
CCM2-202ENST00000381112 SIRT1Q96EB6 747 aa26.96■■□□□ 1.91
CCM2-202ENST00000381112 ANKLE2Q86XL3 938 aa26.95■■□□□ 1.9
CCM2-202ENST00000381112 MYOM1P52179 1685 aa26.94■■□□□ 1.9
CCM2-202ENST00000381112 FAM135BQ49AJ0 1406 aa26.93■■□□□ 1.9
CCM2-202ENST00000381112 WAPLQ7Z5K2 1190 aa26.93■■□□□ 1.9
CCM2-202ENST00000381112 PLEKHH1Q9ULM0 1364 aa26.93■■□□□ 1.9
CCM2-202ENST00000381112 DIP2AQ14689 1571 aa26.93■■□□□ 1.9
CCM2-202ENST00000381112 KNDC1Q76NI1 1749 aa26.92■■□□□ 1.9
CCM2-202ENST00000381112 MINK1Q8N4C8 1332 aaPredicted RBP26.92■■□□□ 1.9
CCM2-202ENST00000381112 CPS1P31327 1500 aa26.91■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms