RNA–Protein interactions for RNA: ENST00000380815.4

GMDS-202, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GMDS, Length 1,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-202ENST00000380815 ADGRF5Q8IZF2 1346 aa29.77■■■□□ 2.36
GMDS-202ENST00000380815 PPLO60437 1756 aa29.76■■■□□ 2.35
GMDS-202ENST00000380815 IQGAP1P46940 1657 aa29.76■■■□□ 2.35
GMDS-202ENST00000380815 SCAF11Q99590 1463 aaKnown RBP29.74■■■□□ 2.35
GMDS-202ENST00000380815 IDI1Q13907 227 aa29.74■■■□□ 2.35
GMDS-202ENST00000380815 TESK2Q96S53 571 aa29.74■■■□□ 2.35
GMDS-202ENST00000380815 CLTCQ00610 1675 aaKnown RBP29.73■■■□□ 2.35
GMDS-202ENST00000380815 ERVK-7P63135 1459 aa29.72■■■□□ 2.35
GMDS-202ENST00000380815 POLR3GLQ9BT43 218 aa29.7■■■□□ 2.35
GMDS-202ENST00000380815 CFAP70Q5T0N1 1121 aa29.69■■■□□ 2.34
GMDS-202ENST00000380815 PIK3C2GO75747 1445 aa29.69■■■□□ 2.34
GMDS-202ENST00000380815 MLECQ14165 292 aa29.67■■■□□ 2.34
GMDS-202ENST00000380815 FBXO31Q5XUX0 539 aaPredicted RBP29.67■■■□□ 2.34
GMDS-202ENST00000380815 NEXMIFQ5QGS0 1516 aa29.66■■■□□ 2.34
GMDS-202ENST00000380815 EIF3AQ14152 1382 aaKnown RBP29.66■■■□□ 2.34
GMDS-202ENST00000380815 TRHP20396 242 aaPredicted RBP29.66■■■□□ 2.34
GMDS-202ENST00000380815 PRKRIP1Q9H875 184 aaPredicted RBP29.65■■■□□ 2.34
GMDS-202ENST00000380815 SETBP1Q9Y6X0 1596 aa29.65■■■□□ 2.34
GMDS-202ENST00000380815 SPATA31D1Q6ZQQ2 1576 aa29.64■■■□□ 2.34
GMDS-202ENST00000380815 TMEM131LA2VDJ0 1609 aa29.64■■■□□ 2.34
GMDS-202ENST00000380815 TMF1P82094 1093 aa29.64■■■□□ 2.34
GMDS-202ENST00000380815 VGFO15240 615 aaPredicted RBP29.63■■■□□ 2.33
GMDS-202ENST00000380815 C14orf93Q9H972 538 aaKnown RBP29.62■■■□□ 2.33
GMDS-202ENST00000380815 ZFYVE9O95405 1425 aa29.62■■■□□ 2.33
GMDS-202ENST00000380815 DISP3Q9P2K9 1392 aa29.62■■■□□ 2.33
GMDS-202ENST00000380815 ESF1Q9H501 851 aaKnown RBP29.61■■■□□ 2.33
GMDS-202ENST00000380815 DNAJC5Q9H3Z4 198 aa29.58■■■□□ 2.33
GMDS-202ENST00000380815 ZMYM3Q14202 1370 aa29.57■■■□□ 2.32
GMDS-202ENST00000380815 MYO5BQ9ULV0 1848 aa29.55■■■□□ 2.32
GMDS-202ENST00000380815 SLC24A1O60721 1099 aa29.54■■■□□ 2.32
GMDS-202ENST00000380815 ADGRB1O14514 1584 aa29.54■■■□□ 2.32
GMDS-202ENST00000380815 CDCA8Q53HL2 280 aa29.52■■■□□ 2.32
GMDS-202ENST00000380815 MYO3AQ8NEV4 1616 aa29.5■■■□□ 2.31
GMDS-202ENST00000380815 NUTM2DQ5VT03 806 aaPredicted RBP29.48■■■□□ 2.31
GMDS-202ENST00000380815 STAG3Q9UJ98 1225 aa29.48■■■□□ 2.31
GMDS-202ENST00000380815 SBNO2Q9Y2G9 1366 aa29.47■■■□□ 2.31
GMDS-202ENST00000380815 A2ML1A8K2U0 1454 aa29.46■■■□□ 2.31
GMDS-202ENST00000380815 KTN1Q86UP2 1357 aaKnown RBP29.44■■■□□ 2.3
GMDS-202ENST00000380815 PER1O15534 1290 aaPredicted RBP29.41■■■□□ 2.3
GMDS-202ENST00000380815 TMEM132EQ6IEE7 984 aa29.41■■■□□ 2.3
GMDS-202ENST00000380815 CENPJQ9HC77 1338 aaPredicted RBP29.41■■■□□ 2.3
GMDS-202ENST00000380815 TNRQ92752 1358 aa29.39■■■□□ 2.3
GMDS-202ENST00000380815 TRAK1Q9UPV9 953 aa29.39■■■□□ 2.3
GMDS-202ENST00000380815 CCDC184Q52MB2 194 aa29.38■■■□□ 2.29
GMDS-202ENST00000380815 PANK3Q9H999 370 aa29.37■■■□□ 2.29
GMDS-202ENST00000380815 KDM5AP29375 1690 aaKnown RBP29.37■■■□□ 2.29
GMDS-202ENST00000380815 RALBP1Q15311 655 aa29.36■■■□□ 2.29
GMDS-202ENST00000380815 MRS2Q9HD23 443 aa29.36■■■□□ 2.29
GMDS-202ENST00000380815 RIMS2Q9UQ26 1411 aa29.35■■■□□ 2.29
GMDS-202ENST00000380815 ASXL1Q8IXJ9 1541 aa29.33■■■□□ 2.29
GMDS-202ENST00000380815 SCAF1Q9H7N4 1312 aaKnown RBP29.32■■■□□ 2.28
GMDS-202ENST00000380815 QRICH2Q9H0J4 1663 aa29.32■■■□□ 2.28
GMDS-202ENST00000380815 ARHGEF28Q8N1W1 1705 aaKnown RBP29.31■■■□□ 2.28
GMDS-202ENST00000380815 ALKQ9UM73 1620 aa29.31■■■□□ 2.28
GMDS-202ENST00000380815 MYOM1P52179 1685 aa29.3■■■□□ 2.28
GMDS-202ENST00000380815 PARD3Q8TEW0 1356 aa29.29■■■□□ 2.28
GMDS-202ENST00000380815 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.29■■■□□ 2.28
GMDS-202ENST00000380815 CNGB1Q14028 1251 aaPredicted RBP29.29■■■□□ 2.28
GMDS-202ENST00000380815 MYBBP1AQ9BQG0 1328 aaKnown RBP29.27■■■□□ 2.28
GMDS-202ENST00000380815 FER1L4A9Z1Z3 1794 aa29.27■■■□□ 2.28
GMDS-202ENST00000380815 NLRP1Q9C000 1473 aa29.26■■■□□ 2.28
GMDS-202ENST00000380815 HDGFP51858 240 aaKnown RBP29.25■■■□□ 2.27
GMDS-202ENST00000380815 YTHDC2Q9H6S0 1430 aaKnown RBP29.24■■■□□ 2.27
GMDS-202ENST00000380815 C3P01024 1663 aa29.24■■■□□ 2.27
GMDS-202ENST00000380815 UBR1Q8IWV7 1749 aa29.24■■■□□ 2.27
GMDS-202ENST00000380815 GTF3C3Q9Y5Q9 886 aa29.22■■■□□ 2.27
GMDS-202ENST00000380815 BRD4O60885 1362 aaPredicted RBP29.22■■■□□ 2.27
GMDS-202ENST00000380815 PUS7Q96PZ0 661 aaKnown RBP29.21■■■□□ 2.27
GMDS-202ENST00000380815 KNSTRNQ9Y448 316 aa29.21■■■□□ 2.27
GMDS-202ENST00000380815 TMEM2Q9UHN6 1383 aa29.21■■■□□ 2.27
GMDS-202ENST00000380815 CEBPAP49715 358 aaPredicted RBP29.21■■■□□ 2.27
GMDS-202ENST00000380815 PTPRMP28827 1452 aa29.2■■■□□ 2.26
GMDS-202ENST00000380815 FAM9BQ8IZU0 186 aa29.19■■■□□ 2.26
GMDS-202ENST00000380815 SENP3Q9H4L4 574 aaPredicted RBP29.18■■■□□ 2.26
GMDS-202ENST00000380815 STK26Q9P289 416 aa29.18■■■□□ 2.26
GMDS-202ENST00000380815 SETD1AO15047 1707 aaKnown RBP29.18■■■□□ 2.26
GMDS-202ENST00000380815 TMC1Q8TDI8 760 aa29.18■■■□□ 2.26
GMDS-202ENST00000380815 HNRNPUQ00839 825 aaKnown RBP eCLIP29.17■■■□□ 2.261e-9■□□□□ 8.7
GMDS-202ENST00000380815 EVC2Q86UK5 1308 aa29.17■■■□□ 2.26
GMDS-202ENST00000380815 NRXN3Q9Y4C0 1643 aa29.17■■■□□ 2.26
GMDS-202ENST00000380815 CC2D1BQ5T0F9 858 aaKnown RBP29.16■■■□□ 2.26
GMDS-202ENST00000380815 NLRP13Q86W25 1043 aa29.16■■■□□ 2.26
GMDS-202ENST00000380815 NPC1L1Q9UHC9 1359 aa29.16■■■□□ 2.26
GMDS-202ENST00000380815 AMER1Q5JTC6 1135 aaPredicted RBP29.15■■■□□ 2.26
GMDS-202ENST00000380815 TULP4Q9NRJ4 1543 aa29.14■■■□□ 2.26
GMDS-202ENST00000380815 LRPPRCP42704 1394 aaKnown RBP29.13■■■□□ 2.25
GMDS-202ENST00000380815 DLC1Q96QB1 1528 aa29.13■■■□□ 2.25
GMDS-202ENST00000380815 PNISRQ8TF01 805 aaKnown RBP29.13■■■□□ 2.25
GMDS-202ENST00000380815 PRAM1Q96QH2 718 aa29.11■■■□□ 2.25
GMDS-202ENST00000380815 ABCC11Q96J66 1382 aa29.09■■■□□ 2.25
GMDS-202ENST00000380815 POGKQ9P215 609 aa29.09■■■□□ 2.25
GMDS-202ENST00000380815 SAFB2Q14151 953 aaKnown RBP eCLIP29.07■■■□□ 2.24
GMDS-202ENST00000380815 CARD14Q9BXL6 1004 aa29.06■■■□□ 2.24
GMDS-202ENST00000380815 SLIT1O75093 1534 aa29.05■■■□□ 2.24
GMDS-202ENST00000380815 METP08581 1390 aa29.04■■■□□ 2.24
GMDS-202ENST00000380815 PLEKHG1Q9ULL1 1385 aa29.04■■■□□ 2.24
GMDS-202ENST00000380815 SLC12A5Q9H2X9 1139 aa29.03■■■□□ 2.24
GMDS-202ENST00000380815 ARHGAP23Q9P227 1491 aa29.03■■■□□ 2.24
GMDS-202ENST00000380815 NINLQ9Y2I6 1382 aa29.02■■■□□ 2.24
GMDS-202ENST00000380815 LTKP29376 864 aa29.01■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms