RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 TRAK1Q9UPV9 953 aa16.1■□□□□ 0.17
PRPF40B-202ENST00000380281 CDC42BPAQ5VT25 1732 aa16.1■□□□□ 0.17
PRPF40B-202ENST00000380281 AMER1Q5JTC6 1135 aaPredicted RBP16.1■□□□□ 0.17
PRPF40B-202ENST00000380281 NAP1L5Q96NT1 182 aaPredicted RBP16.1■□□□□ 0.17
PRPF40B-202ENST00000380281 PODXL2Q9NZ53 605 aa16.1■□□□□ 0.17
PRPF40B-202ENST00000380281 MS4A1P11836 297 aa16.09■□□□□ 0.17
PRPF40B-202ENST00000380281 EFCAB2Q5VUJ9 269 aa16.09■□□□□ 0.17
PRPF40B-202ENST00000380281 SLKQ9H2G2 1235 aaPredicted RBP16.09■□□□□ 0.17
PRPF40B-202ENST00000380281 SPAG9O60271 1321 aaKnown RBP16.09■□□□□ 0.17
PRPF40B-202ENST00000380281 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.08■□□□□ 0.17
PRPF40B-202ENST00000380281 TNNQ9UQP3 1299 aa16.08■□□□□ 0.17
PRPF40B-202ENST00000380281 POLR1AO95602 1720 aaPredicted RBP16.08■□□□□ 0.16
PRPF40B-202ENST00000380281 TMEM132EQ6IEE7 984 aa16.08■□□□□ 0.16
PRPF40B-202ENST00000380281 RSPH4AQ5TD94 716 aa16.08■□□□□ 0.16
PRPF40B-202ENST00000380281 IGHDP01880 384 aa16.06■□□□□ 0.16
PRPF40B-202ENST00000380281 HSP90AA2PQ14568 343 aaPredicted RBP16.06■□□□□ 0.16
PRPF40B-202ENST00000380281 ARHGEF12Q9NZN5 1544 aa16.06■□□□□ 0.16
PRPF40B-202ENST00000380281 MAGI2Q86UL8 1455 aa16.05■□□□□ 0.16
PRPF40B-202ENST00000380281 CENPQQ7L2Z9 268 aaPredicted RBP16.05■□□□□ 0.16
PRPF40B-202ENST00000380281 SLFN5Q08AF3 891 aa16.04■□□□□ 0.16
PRPF40B-202ENST00000380281 FAM161AQ3B820 660 aa16.04■□□□□ 0.16
PRPF40B-202ENST00000380281 POGKQ9P215 609 aa16.04■□□□□ 0.16
PRPF40B-202ENST00000380281 KDM5DQ9BY66 1539 aa16.04■□□□□ 0.16
PRPF40B-202ENST00000380281 SLC12A5Q9H2X9 1139 aa16.04■□□□□ 0.16
PRPF40B-202ENST00000380281 COL17A1Q9UMD9 1497 aaPredicted RBP16.04■□□□□ 0.16
PRPF40B-202ENST00000380281 GGT6Q6P531 493 aa16.03■□□□□ 0.16
PRPF40B-202ENST00000380281 NUP160Q12769 1436 aa16.03■□□□□ 0.16
PRPF40B-202ENST00000380281 ADGRF5Q8IZF2 1346 aa16.03■□□□□ 0.16
PRPF40B-202ENST00000380281 CARD14Q9BXL6 1004 aa16.03■□□□□ 0.16
PRPF40B-202ENST00000380281 SAMD9LQ8IVG5 1584 aa16.02■□□□□ 0.16
PRPF40B-202ENST00000380281 SEC24BO95487 1268 aa16.02■□□□□ 0.16
PRPF40B-202ENST00000380281 C8orf34Q49A92 452 aa16.02■□□□□ 0.16
PRPF40B-202ENST00000380281 MORC1Q86VD1 984 aa16.01■□□□□ 0.15
PRPF40B-202ENST00000380281 CROCC2H7BZ55 1655 aa16.01■□□□□ 0.15
PRPF40B-202ENST00000380281 ABCA8O94911 1581 aa16.01■□□□□ 0.15
PRPF40B-202ENST00000380281 CDCA8Q53HL2 280 aa16.01■□□□□ 0.15
PRPF40B-202ENST00000380281 TRAPPC8Q9Y2L5 1435 aa16■□□□□ 0.15
PRPF40B-202ENST00000380281 SHANK2Q9UPX8 1470 aa16■□□□□ 0.15
PRPF40B-202ENST00000380281 STK26Q9P289 416 aa15.99■□□□□ 0.15
PRPF40B-202ENST00000380281 KDM2BQ8NHM5 1336 aa15.99■□□□□ 0.15
PRPF40B-202ENST00000380281 HSP90AA1P07900 732 aaKnown RBP15.98■□□□□ 0.15
PRPF40B-202ENST00000380281 CENPJQ9HC77 1338 aaPredicted RBP15.97■□□□□ 0.15
PRPF40B-202ENST00000380281 U2SURPO15042 1029 aaKnown RBP15.96■□□□□ 0.15
PRPF40B-202ENST00000380281 PNNQ9H307 717 aaKnown RBP15.96■□□□□ 0.15
PRPF40B-202ENST00000380281 BLMP54132 1417 aaPredicted RBP15.96■□□□□ 0.15
PRPF40B-202ENST00000380281 GPRASP1Q5JY77 1395 aa15.96■□□□□ 0.15
PRPF40B-202ENST00000380281 TRPM1Q7Z4N2 1603 aa15.95■□□□□ 0.14
PRPF40B-202ENST00000380281 U2AF1L5P0DN76 240 aaPredicted RBP15.95■□□□□ 0.14
PRPF40B-202ENST00000380281 U2AF1Q01081 240 aaKnown RBP eCLIP15.95■□□□□ 0.14
PRPF40B-202ENST00000380281 TCP11L2Q8N4U5 519 aa15.95■□□□□ 0.14
PRPF40B-202ENST00000380281 TTC37Q6PGP7 1564 aa15.95■□□□□ 0.14
PRPF40B-202ENST00000380281 WWC1Q8IX03 1113 aa15.94■□□□□ 0.14
PRPF40B-202ENST00000380281 ERCC6L2Q5T890 1561 aa15.94■□□□□ 0.14
PRPF40B-202ENST00000380281 MTHFSP49914 203 aa15.94■□□□□ 0.14
PRPF40B-202ENST00000380281 WDR7Q9Y4E6 1490 aa15.94■□□□□ 0.14
PRPF40B-202ENST00000380281 E9PSI1 815 aa15.93■□□□□ 0.14
PRPF40B-202ENST00000380281 RLBP1P12271 317 aa15.93■□□□□ 0.14
PRPF40B-202ENST00000380281 SCAPERQ9BY12 1400 aa15.93■□□□□ 0.14
PRPF40B-202ENST00000380281 ADCY10Q96PN6 1610 aa15.93■□□□□ 0.14
PRPF40B-202ENST00000380281 TSR2Q969E8 191 aaKnown RBP15.93■□□□□ 0.14
PRPF40B-202ENST00000380281 CDC42BPBQ9Y5S2 1711 aa15.93■□□□□ 0.14
PRPF40B-202ENST00000380281 RRP9O43818 475 aaKnown RBP15.92■□□□□ 0.14
PRPF40B-202ENST00000380281 GZF1Q9H116 711 aaPredicted RBP15.92■□□□□ 0.14
PRPF40B-202ENST00000380281 ZMYM4Q5VZL5 1548 aa15.91■□□□□ 0.14
PRPF40B-202ENST00000380281 ZNF521Q96K83 1311 aa15.91■□□□□ 0.14
PRPF40B-202ENST00000380281 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.91■□□□□ 0.14
PRPF40B-202ENST00000380281 CABP2Q9NPB3 220 aa15.9■□□□□ 0.14
PRPF40B-202ENST00000380281 PCDHB15Q9Y5E8 787 aa15.9■□□□□ 0.14
PRPF40B-202ENST00000380281 A0A0U1RQG5 324 aaPredicted RBP15.89■□□□□ 0.13
PRPF40B-202ENST00000380281 FBLN1P23142 703 aa15.89■□□□□ 0.13
PRPF40B-202ENST00000380281 CFAP65Q6ZU64 1925 aaKnown RBP15.89■□□□□ 0.13
PRPF40B-202ENST00000380281 PANK2Q9BZ23 570 aa15.89■□□□□ 0.13
PRPF40B-202ENST00000380281 UGGT1Q9NYU2 1555 aa15.88■□□□□ 0.13
PRPF40B-202ENST00000380281 PRDM15P57071 1507 aaPredicted RBP15.87■□□□□ 0.13
PRPF40B-202ENST00000380281 FTSJ3Q8IY81 847 aaKnown RBP15.87■□□□□ 0.13
PRPF40B-202ENST00000380281 E9PCH4 1651 aa15.87■□□□□ 0.13
PRPF40B-202ENST00000380281 GGNBP2Q9H3C7 697 aa15.87■□□□□ 0.13
PRPF40B-202ENST00000380281 KANK1Q14678 1352 aa15.86■□□□□ 0.13
PRPF40B-202ENST00000380281 ARHGEF5Q12774 1597 aa15.86■□□□□ 0.13
PRPF40B-202ENST00000380281 MFAP1P55081 439 aaKnown RBP15.86■□□□□ 0.13
PRPF40B-202ENST00000380281 PDZRN3Q9UPQ7 1066 aa15.86■□□□□ 0.13
PRPF40B-202ENST00000380281 SCAF11Q99590 1463 aaKnown RBP15.85■□□□□ 0.13
PRPF40B-202ENST00000380281 NKTRP30414 1462 aaKnown RBP15.85■□□□□ 0.13
PRPF40B-202ENST00000380281 XRCC6P12956 609 aaKnown RBP eCLIP15.85■□□□□ 0.13
PRPF40B-202ENST00000380281 L1TD1Q5T7N2 865 aaKnown RBP15.85■□□□□ 0.13
PRPF40B-202ENST00000380281 RARSP54136 660 aaKnown RBP15.84■□□□□ 0.13
PRPF40B-202ENST00000380281 SRPK2P78362 688 aaKnown RBP15.84■□□□□ 0.13
PRPF40B-202ENST00000380281 EIF3AQ14152 1382 aaKnown RBP15.84■□□□□ 0.13
PRPF40B-202ENST00000380281 NSD3Q9BZ95 1437 aa15.83■□□□□ 0.13
PRPF40B-202ENST00000380281 ELL2O00472 640 aaPredicted RBP15.83■□□□□ 0.13
PRPF40B-202ENST00000380281 ASXL1Q8IXJ9 1541 aa15.83■□□□□ 0.12
PRPF40B-202ENST00000380281 CLCN1P35523 988 aa15.83■□□□□ 0.12
PRPF40B-202ENST00000380281 ITPRIPQ8IWB1 547 aa15.83■□□□□ 0.12
PRPF40B-202ENST00000380281 UPF2Q9HAU5 1272 aaKnown RBP15.83■□□□□ 0.12
PRPF40B-202ENST00000380281 CGNL1Q0VF96 1302 aa15.82■□□□□ 0.12
PRPF40B-202ENST00000380281 SMC4Q9NTJ3 1288 aa15.82■□□□□ 0.12
PRPF40B-202ENST00000380281 PREX2Q70Z35 1606 aa15.82■□□□□ 0.12
PRPF40B-202ENST00000380281 RUNDC1Q96C34 613 aa15.82■□□□□ 0.12
PRPF40B-202ENST00000380281 PLCH2O75038 1416 aa15.82■□□□□ 0.12
PRPF40B-202ENST00000380281 TRMT2AQ8IZ69 625 aaKnown RBP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms