RNA–Protein interactions for RNA: ENST00000379802.7

DSP-201, Transcript of desmoplakin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DSP, Length 9,796 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSP-201ENST00000379802 ACBD3Q9H3P7 528 aa12.45□□□□□ -0.42
DSP-201ENST00000379802 NUP155O75694 1391 aa12.45□□□□□ -0.42
DSP-201ENST00000379802 CUX2O14529 1486 aa12.45□□□□□ -0.42
DSP-201ENST00000379802 SETD5Q9C0A6 1442 aa12.44□□□□□ -0.42
DSP-201ENST00000379802 RNF20Q5VTR2 975 aa12.44□□□□□ -0.42
DSP-201ENST00000379802 FOXD4L1Q9NU39 408 aa12.43□□□□□ -0.42
DSP-201ENST00000379802 CGNL1Q0VF96 1302 aa12.43□□□□□ -0.42
DSP-201ENST00000379802 OFD1O75665 1012 aa12.43□□□□□ -0.42
DSP-201ENST00000379802 EFCAB2Q5VUJ9 269 aa12.43□□□□□ -0.42
DSP-201ENST00000379802 FMN1Q68DA7 1419 aa12.43□□□□□ -0.42
DSP-201ENST00000379802 CCDC191Q8NCU4 936 aa12.43□□□□□ -0.42
DSP-201ENST00000379802 COG3Q96JB2 828 aa12.43□□□□□ -0.42
DSP-201ENST00000379802 REC8O95072 547 aa12.43□□□□□ -0.42
DSP-201ENST00000379802 DDX58O95786 925 aaKnown RBP12.43□□□□□ -0.42
DSP-201ENST00000379802 HOMER1Q86YM7 354 aa12.43□□□□□ -0.42
DSP-201ENST00000379802 NOM1Q5C9Z4 860 aaKnown RBP12.42□□□□□ -0.42
DSP-201ENST00000379802 SIN3AQ96ST3 1273 aa12.41□□□□□ -0.42
DSP-201ENST00000379802 IKQ13123 557 aaPredicted RBP12.41□□□□□ -0.42
DSP-201ENST00000379802 ZNF592Q92610 1267 aa12.41□□□□□ -0.42
DSP-201ENST00000379802 MAP7D2Q96T17 732 aa12.41□□□□□ -0.42
DSP-201ENST00000379802 IFIT2P09913 472 aaKnown RBP12.41□□□□□ -0.42
DSP-201ENST00000379802 SKOR2Q2VWA4 1001 aaPredicted RBP12.41□□□□□ -0.42
DSP-201ENST00000379802 ANO2Q9NQ90 1003 aa12.41□□□□□ -0.42
DSP-201ENST00000379802 CCER2I3L3R5 266 aa12.4□□□□□ -0.42
DSP-201ENST00000379802 TNIKQ9UKE5 1360 aa12.4□□□□□ -0.42
DSP-201ENST00000379802 XBP1P17861 261 aa12.4□□□□□ -0.42
DSP-201ENST00000379802 ZNF771Q7L3S4 317 aaPredicted RBP12.39□□□□□ -0.43
DSP-201ENST00000379802 NAT10Q9H0A0 1025 aaKnown RBP12.39□□□□□ -0.43
DSP-201ENST00000379802 HSP90B2PQ58FF3 399 aa12.38□□□□□ -0.43
DSP-201ENST00000379802 CAGE1Q8TC20 777 aa12.38□□□□□ -0.43
DSP-201ENST00000379802 CARMIL1Q5VZK9 1371 aa12.38□□□□□ -0.43
DSP-201ENST00000379802 SMARCA2P51531 1590 aa12.38□□□□□ -0.43
DSP-201ENST00000379802 NGEFQ8N5V2 710 aa12.38□□□□□ -0.43
DSP-201ENST00000379802 BICD2Q8TD16 824 aa12.38□□□□□ -0.43
DSP-201ENST00000379802 SLC3A2P08195 630 aaKnown RBP12.38□□□□□ -0.43
DSP-201ENST00000379802 SYCP1Q15431 976 aa12.37□□□□□ -0.43
DSP-201ENST00000379802 RALYLQ86SE5 291 aaKnown RBP12.37□□□□□ -0.43
DSP-201ENST00000379802 ANKRD18AQ8IVF6 992 aa12.37□□□□□ -0.43
DSP-201ENST00000379802 NUTM2FA1L443 756 aa12.37□□□□□ -0.43
DSP-201ENST00000379802 ARGLU1Q9NWB6 273 aaPredicted RBP12.37□□□□□ -0.43
DSP-201ENST00000379802 TIMELESSQ9UNS1 1208 aa12.37□□□□□ -0.43
DSP-201ENST00000379802 PSME1Q06323 249 aa12.37□□□□□ -0.43
DSP-201ENST00000379802 CLUAP1Q96AJ1 413 aa12.36□□□□□ -0.43
DSP-201ENST00000379802 G3BP1Q13283 466 aaKnown RBP eCLIP12.36□□□□□ -0.435e-14■■□□□ 12.3
DSP-201ENST00000379802 KIF3BO15066 747 aa12.36□□□□□ -0.43
DSP-201ENST00000379802 TRIM21P19474 475 aaKnown RBP12.36□□□□□ -0.43
DSP-201ENST00000379802 CCDC146Q8IYE0 955 aa12.36□□□□□ -0.43
DSP-201ENST00000379802 CDK5RAP3Q96JB5 506 aa12.36□□□□□ -0.43
DSP-201ENST00000379802 EVC2Q86UK5 1308 aa12.36□□□□□ -0.43
DSP-201ENST00000379802 SART3Q15020 963 aaKnown RBP12.35□□□□□ -0.43
DSP-201ENST00000379802 OLFM4Q6UX06 510 aa12.35□□□□□ -0.43
DSP-201ENST00000379802 KIF15Q9NS87 1388 aa12.35□□□□□ -0.43
DSP-201ENST00000379802 HSP90AA2PQ14568 343 aaPredicted RBP12.35□□□□□ -0.43
DSP-201ENST00000379802 PDS5BQ9NTI5 1447 aa12.35□□□□□ -0.43
DSP-201ENST00000379802 SF3B2Q13435 895 aaKnown RBP12.35□□□□□ -0.43
DSP-201ENST00000379802 NINLQ9Y2I6 1382 aa12.35□□□□□ -0.43
DSP-201ENST00000379802 HSPA5P11021 654 aaKnown RBP12.35□□□□□ -0.43
DSP-201ENST00000379802 CCDC144AA2RUR9 1427 aa12.35□□□□□ -0.43
DSP-201ENST00000379802 FOXD4L6Q3SYB3 417 aaPredicted RBP12.35□□□□□ -0.43
DSP-201ENST00000379802 FOXD4L3Q6VB84 417 aaPredicted RBP12.35□□□□□ -0.43
DSP-201ENST00000379802 ANKRD45Q5TZF3 282 aa12.34□□□□□ -0.43
DSP-201ENST00000379802 CCDC73Q6ZRK6 1079 aa12.34□□□□□ -0.43
DSP-201ENST00000379802 CCDC27Q2M243 656 aa12.34□□□□□ -0.43
DSP-201ENST00000379802 ERC2O15083 957 aa12.34□□□□□ -0.43
DSP-201ENST00000379802 DDX49Q9Y6V7 483 aaKnown RBP12.34□□□□□ -0.43
DSP-201ENST00000379802 DESP17661 470 aa12.34□□□□□ -0.43
DSP-201ENST00000379802 NUTM2DQ5VT03 806 aaPredicted RBP12.34□□□□□ -0.43
DSP-201ENST00000379802 ATF3P18847 181 aa12.34□□□□□ -0.43
DSP-201ENST00000379802 VSIG10Q8N0Z9 540 aa12.33□□□□□ -0.44
DSP-201ENST00000379802 FYB1O15117 783 aa12.33□□□□□ -0.44
DSP-201ENST00000379802 EZRP15311 586 aaKnown RBP12.33□□□□□ -0.44
DSP-201ENST00000379802 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.33□□□□□ -0.44
DSP-201ENST00000379802 ERLIN2O94905 339 aa12.33□□□□□ -0.44
DSP-201ENST00000379802 EIF2S2P20042 333 aaKnown RBP12.33□□□□□ -0.44
DSP-201ENST00000379802 TXLNAP40222 546 aa12.33□□□□□ -0.44
DSP-201ENST00000379802 SASS6Q6UVJ0 657 aa12.32□□□□□ -0.44
DSP-201ENST00000379802 CCDC97Q96F63 343 aaPredicted RBP12.32□□□□□ -0.44
DSP-201ENST00000379802 NLRP13Q86W25 1043 aa12.32□□□□□ -0.44
DSP-201ENST00000379802 HSP90AB4PQ58FF6 505 aa12.32□□□□□ -0.44
DSP-201ENST00000379802 PDE3BQ13370 1112 aa12.32□□□□□ -0.44
DSP-201ENST00000379802 SEPT7Q16181 437 aaKnown RBP12.32□□□□□ -0.44
DSP-201ENST00000379802 PPP1R1BQ9UD71 204 aaPredicted RBP12.31□□□□□ -0.44
DSP-201ENST00000379802 MNS1Q8NEH6 495 aa12.31□□□□□ -0.44
DSP-201ENST00000379802 CHMP5Q9NZZ3 219 aa12.31□□□□□ -0.44
DSP-201ENST00000379802 MIA2Q96PC5 1412 aa12.31□□□□□ -0.44
DSP-201ENST00000379802 KRT18P05783 430 aaKnown RBP12.3□□□□□ -0.44
DSP-201ENST00000379802 MAGEC2Q9UBF1 373 aaPredicted RBP12.3□□□□□ -0.44
DSP-201ENST00000379802 CWC15Q9P013 229 aaKnown RBP12.3□□□□□ -0.44
DSP-201ENST00000379802 H0YHG0 523 aa12.3□□□□□ -0.44
DSP-201ENST00000379802 SMG6Q86US8 1419 aaKnown RBP12.29□□□□□ -0.44
DSP-201ENST00000379802 ERCC4Q92889 916 aaPredicted RBP12.29□□□□□ -0.44
DSP-201ENST00000379802 RSPH4AQ5TD94 716 aa12.29□□□□□ -0.44
DSP-201ENST00000379802 DNAI2Q9GZS0 605 aa12.29□□□□□ -0.44
DSP-201ENST00000379802 NEFHP12036 1026 aa12.29□□□□□ -0.44
DSP-201ENST00000379802 ZKSCAN2Q63HK3 967 aa12.29□□□□□ -0.44
DSP-201ENST00000379802 LUC7LQ9NQ29 371 aaKnown RBP12.29□□□□□ -0.44
DSP-201ENST00000379802 VPS37CA5D8V6 355 aaPredicted RBP12.29□□□□□ -0.44
DSP-201ENST00000379802 GOLGA6L10A6NI86 522 aa12.29□□□□□ -0.44
DSP-201ENST00000379802 KIF6Q6ZMV9 814 aa12.29□□□□□ -0.44
DSP-201ENST00000379802 TBC1D2BQ9UPU7 963 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms