RNA–Protein interactions for RNA: ENST00000379521.8

NFX1-202, Transcript of nuclear transcription factor, X-box binding 1, humanhuman

TSL 1 (best)

Gene NFX1, Length 3,609 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFX1-202ENST00000379521 ARHGEF40Q8TER5 1519 aa9.65□□□□□ -0.87
NFX1-202ENST00000379521 USP54Q70EL1 1684 aa9.64□□□□□ -0.87
NFX1-202ENST00000379521 ERVK-7P63135 1459 aa9.64□□□□□ -0.87
NFX1-202ENST00000379521 DDX10Q13206 875 aaKnown RBP9.64□□□□□ -0.87
NFX1-202ENST00000379521 SMG6Q86US8 1419 aaKnown RBP9.64□□□□□ -0.87
NFX1-202ENST00000379521 TSPY4P0CV99 314 aa9.63□□□□□ -0.87
NFX1-202ENST00000379521 TSPY10P0CW01 314 aa9.63□□□□□ -0.87
NFX1-202ENST00000379521 SUPT16HQ9Y5B9 1047 aaKnown RBP9.62□□□□□ -0.87
NFX1-202ENST00000379521 DLC1Q96QB1 1528 aa9.62□□□□□ -0.87
NFX1-202ENST00000379521 BRD4O60885 1362 aaPredicted RBP9.61□□□□□ -0.87
NFX1-202ENST00000379521 FBLN2P98095 1184 aa9.61□□□□□ -0.87
NFX1-202ENST00000379521 ZBED9Q6R2W3 1325 aa9.61□□□□□ -0.87
NFX1-202ENST00000379521 ERICH6BQ5W0A0 696 aa9.6□□□□□ -0.87
NFX1-202ENST00000379521 CD109Q6YHK3 1445 aa9.6□□□□□ -0.87
NFX1-202ENST00000379521 TOPAZ1Q8N9V7 1692 aa9.6□□□□□ -0.87
NFX1-202ENST00000379521 CDC42BPGQ6DT37 1551 aa9.6□□□□□ -0.87
NFX1-202ENST00000379521 DISP3Q9P2K9 1392 aa9.6□□□□□ -0.87
NFX1-202ENST00000379521 ADGRB2O60241 1585 aa9.59□□□□□ -0.87
NFX1-202ENST00000379521 PELP1Q8IZL8 1130 aaKnown RBP9.59□□□□□ -0.87
NFX1-202ENST00000379521 AKAP12Q02952 1782 aa9.58□□□□□ -0.88
NFX1-202ENST00000379521 TULP4Q9NRJ4 1543 aa9.58□□□□□ -0.88
NFX1-202ENST00000379521 CCDC184Q52MB2 194 aa9.58□□□□□ -0.88
NFX1-202ENST00000379521 TRIM52Q96A61 297 aa9.58□□□□□ -0.88
NFX1-202ENST00000379521 NRKQ7Z2Y5 1582 aa9.57□□□□□ -0.88
NFX1-202ENST00000379521 PUS7Q96PZ0 661 aaKnown RBP9.57□□□□□ -0.88
NFX1-202ENST00000379521 MED14O60244 1454 aa9.57□□□□□ -0.88
NFX1-202ENST00000379521 KIF20BQ96Q89 1820 aa9.57□□□□□ -0.88
NFX1-202ENST00000379521 UBR1Q8IWV7 1749 aa9.56□□□□□ -0.88
NFX1-202ENST00000379521 ARID3CA6NKF2 412 aa9.56□□□□□ -0.88
NFX1-202ENST00000379521 MON2Q7Z3U7 1717 aa9.56□□□□□ -0.88
NFX1-202ENST00000379521 PTPRMP28827 1452 aa9.56□□□□□ -0.88
NFX1-202ENST00000379521 SPAG9O60271 1321 aaKnown RBP9.56□□□□□ -0.88
NFX1-202ENST00000379521 ANP32CO43423 234 aa9.56□□□□□ -0.88
NFX1-202ENST00000379521 PNISRQ8TF01 805 aaKnown RBP9.55□□□□□ -0.88
NFX1-202ENST00000379521 IQSEC2Q5JU85 1478 aa9.55□□□□□ -0.88
NFX1-202ENST00000379521 NLRP1Q9C000 1473 aa9.55□□□□□ -0.88
NFX1-202ENST00000379521 NALCNQ8IZF0 1738 aa9.55□□□□□ -0.88
NFX1-202ENST00000379521 VIRMAQ69YN4 1812 aaKnown RBP9.53□□□□□ -0.88
NFX1-202ENST00000379521 OSCARQ8IYS5 282 aa9.53□□□□□ -0.88
NFX1-202ENST00000379521 CPS1P31327 1500 aa9.53□□□□□ -0.88
NFX1-202ENST00000379521 RPGRIP1LQ68CZ1 1315 aa9.52□□□□□ -0.88
NFX1-202ENST00000379521 CD163L1Q9NR16 1453 aa9.52□□□□□ -0.89
NFX1-202ENST00000379521 AFAP1Q8N556 730 aa9.52□□□□□ -0.89
NFX1-202ENST00000379521 MARF1Q9Y4F3 1742 aaKnown RBP9.52□□□□□ -0.89
NFX1-202ENST00000379521 ZNF521Q96K83 1311 aa9.51□□□□□ -0.89
NFX1-202ENST00000379521 COL3A1P02461 1466 aaPredicted RBP9.51□□□□□ -0.89
NFX1-202ENST00000379521 RALBP1Q15311 655 aa9.51□□□□□ -0.89
NFX1-202ENST00000379521 HIRIP3Q9BW71 556 aaPredicted RBP9.51□□□□□ -0.89
NFX1-202ENST00000379521 ALKQ9UM73 1620 aa9.51□□□□□ -0.89
NFX1-202ENST00000379521 NCBP3Q53F19 620 aaKnown RBP9.5□□□□□ -0.89
NFX1-202ENST00000379521 ZNF777Q9ULD5 760 aaPredicted RBP9.5□□□□□ -0.89
NFX1-202ENST00000379521 C3P01024 1663 aa9.5□□□□□ -0.89
NFX1-202ENST00000379521 LRRC7Q96NW7 1537 aa9.5□□□□□ -0.89
NFX1-202ENST00000379521 MYBBP1AQ9BQG0 1328 aaKnown RBP9.49□□□□□ -0.89
NFX1-202ENST00000379521 NBPF1Q3BBV0 1214 aa9.49□□□□□ -0.89
NFX1-202ENST00000379521 TECPR2O15040 1411 aa9.49□□□□□ -0.89
NFX1-202ENST00000379521 ST20-MTHFSA0A0A6YYL1 179 aa9.49□□□□□ -0.89
NFX1-202ENST00000379521 YEATS2Q9ULM3 1422 aa9.49□□□□□ -0.89
NFX1-202ENST00000379521 PPP6R1Q9UPN7 881 aa9.48□□□□□ -0.89
NFX1-202ENST00000379521 RGPD1P0DJD0 1748 aa9.48□□□□□ -0.89
NFX1-202ENST00000379521 KANK1Q14678 1352 aa9.48□□□□□ -0.89
NFX1-202ENST00000379521 ZNF142P52746 1687 aaPredicted RBP9.48□□□□□ -0.89
NFX1-202ENST00000379521 AMER1Q5JTC6 1135 aaPredicted RBP9.48□□□□□ -0.89
NFX1-202ENST00000379521 TRMT2AQ8IZ69 625 aaKnown RBP9.46□□□□□ -0.89
NFX1-202ENST00000379521 DCAF11Q8TEB1 546 aa9.46□□□□□ -0.89
NFX1-202ENST00000379521 C14orf93Q9H972 538 aaKnown RBP9.45□□□□□ -0.9
NFX1-202ENST00000379521 A2ML1A8K2U0 1454 aa9.45□□□□□ -0.9
NFX1-202ENST00000379521 XRN1Q8IZH2 1706 aaKnown RBP9.45□□□□□ -0.9
NFX1-202ENST00000379521 CARD11Q9BXL7 1154 aa9.45□□□□□ -0.9
NFX1-202ENST00000379521 SLIT1O75093 1534 aa9.44□□□□□ -0.9
NFX1-202ENST00000379521 EIF3AQ14152 1382 aaKnown RBP9.43□□□□□ -0.9
NFX1-202ENST00000379521 NINLQ9Y2I6 1382 aa9.43□□□□□ -0.9
NFX1-202ENST00000379521 DIP2AQ14689 1571 aa9.43□□□□□ -0.9
NFX1-202ENST00000379521 SLC24A1O60721 1099 aa9.43□□□□□ -0.9
NFX1-202ENST00000379521 PHF23Q9BUL5 403 aaPredicted RBP9.43□□□□□ -0.9
NFX1-202ENST00000379521 ARHGAP23Q9P227 1491 aa9.43□□□□□ -0.9
NFX1-202ENST00000379521 N4BP2Q86UW6 1770 aaPredicted RBP9.42□□□□□ -0.9
NFX1-202ENST00000379521 POLR3AO14802 1390 aaPredicted RBP9.42□□□□□ -0.9
NFX1-202ENST00000379521 PHRF1Q9P1Y6 1649 aaKnown RBP9.42□□□□□ -0.9
NFX1-202ENST00000379521 TSPOAP1O95153 1857 aa9.41□□□□□ -0.9
NFX1-202ENST00000379521 ADGRF5Q8IZF2 1346 aa9.41□□□□□ -0.9
NFX1-202ENST00000379521 ITSN1Q15811 1721 aa9.4□□□□□ -0.9
NFX1-202ENST00000379521 YTHDC1Q96MU7 727 aaKnown RBP9.4□□□□□ -0.9
NFX1-202ENST00000379521 CFAP65Q6ZU64 1925 aaKnown RBP9.4□□□□□ -0.9
NFX1-202ENST00000379521 TSHZ2Q9NRE2 1034 aa9.4□□□□□ -0.9
NFX1-202ENST00000379521 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.4□□□□□ -0.9
NFX1-202ENST00000379521 NSD2O96028 1365 aa9.39□□□□□ -0.91
NFX1-202ENST00000379521 NLRP13Q86W25 1043 aa9.39□□□□□ -0.91
NFX1-202ENST00000379521 PNPLA6Q8IY17 1366 aa9.38□□□□□ -0.91
NFX1-202ENST00000379521 PDE3BQ13370 1112 aa9.38□□□□□ -0.91
NFX1-202ENST00000379521 ATP7BP35670 1465 aa9.38□□□□□ -0.91
NFX1-202ENST00000379521 FMN2Q9NZ56 1722 aa9.37□□□□□ -0.91
NFX1-202ENST00000379521 FAM135BQ49AJ0 1406 aa9.37□□□□□ -0.91
NFX1-202ENST00000379521 NUDCQ9Y266 331 aa9.36□□□□□ -0.91
NFX1-202ENST00000379521 YTHDC2Q9H6S0 1430 aaKnown RBP9.36□□□□□ -0.91
NFX1-202ENST00000379521 FER1L4A9Z1Z3 1794 aa9.36□□□□□ -0.91
NFX1-202ENST00000379521 ABCC11Q96J66 1382 aa9.36□□□□□ -0.91
NFX1-202ENST00000379521 CPSF1Q10570 1443 aaKnown RBP9.36□□□□□ -0.91
NFX1-202ENST00000379521 ADAMTSL3P82987 1691 aa9.36□□□□□ -0.91
NFX1-202ENST00000379521 SIRT1Q96EB6 747 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms