RNA–Protein interactions for RNA: ENST00000379516.6

SNX2-201, Transcript of sorting nexin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX2, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-201ENST00000379516 SIGLEC1Q9BZZ2 1709 aa20.62■□□□□ 0.89
SNX2-201ENST00000379516 IQGAP1P46940 1657 aa20.62■□□□□ 0.89
SNX2-201ENST00000379516 IFT172Q9UG01 1749 aa20.62■□□□□ 0.89
SNX2-201ENST00000379516 KIAA1210Q9ULL0 1709 aa20.61■□□□□ 0.89
SNX2-201ENST00000379516 NRXN1Q9ULB1 1477 aa20.6■□□□□ 0.89
SNX2-201ENST00000379516 SYNMO15061 1565 aa20.6■□□□□ 0.89
SNX2-201ENST00000379516 RPGRIP1LQ68CZ1 1315 aa20.59■□□□□ 0.89
SNX2-201ENST00000379516 HNRNPUQ00839 825 aaKnown RBP eCLIP20.59■□□□□ 0.89
SNX2-201ENST00000379516 EIF3AQ14152 1382 aaKnown RBP20.59■□□□□ 0.89
SNX2-201ENST00000379516 FAM9BQ8IZU0 186 aa20.59■□□□□ 0.89
SNX2-201ENST00000379516 REREQ9P2R6 1566 aa20.58■□□□□ 0.89
SNX2-201ENST00000379516 IDI1Q13907 227 aa20.57■□□□□ 0.88
SNX2-201ENST00000379516 PIK3C2BO00750 1634 aa20.56■□□□□ 0.88
SNX2-201ENST00000379516 AGLP35573 1532 aa20.56■□□□□ 0.88
SNX2-201ENST00000379516 SLC52A1Q9NWF4 448 aa20.56■□□□□ 0.88
SNX2-201ENST00000379516 PPP6R1Q9UPN7 881 aa20.54■□□□□ 0.88
SNX2-201ENST00000379516 PPLO60437 1756 aa20.54■□□□□ 0.88
SNX2-201ENST00000379516 PIK3C2GO75747 1445 aa20.53■□□□□ 0.88
SNX2-201ENST00000379516 PER1O15534 1290 aaPredicted RBP20.53■□□□□ 0.88
SNX2-201ENST00000379516 PANK3Q9H999 370 aa20.53■□□□□ 0.88
SNX2-201ENST00000379516 MLECQ14165 292 aa20.53■□□□□ 0.88
SNX2-201ENST00000379516 RALBP1Q15311 655 aa20.53■□□□□ 0.88
SNX2-201ENST00000379516 CDCA8Q53HL2 280 aa20.53■□□□□ 0.88
SNX2-201ENST00000379516 FBXO31Q5XUX0 539 aaPredicted RBP20.53■□□□□ 0.88
SNX2-201ENST00000379516 C14orf93Q9H972 538 aaKnown RBP20.53■□□□□ 0.88
SNX2-201ENST00000379516 KTN1Q86UP2 1357 aaKnown RBP20.52■□□□□ 0.88
SNX2-201ENST00000379516 VGFO15240 615 aaPredicted RBP20.51■□□□□ 0.87
SNX2-201ENST00000379516 NUTM2DQ5VT03 806 aaPredicted RBP20.51■□□□□ 0.87
SNX2-201ENST00000379516 PREX1Q8TCU6 1659 aa20.51■□□□□ 0.87
SNX2-201ENST00000379516 ARHGEF40Q8TER5 1519 aa20.5■□□□□ 0.87
SNX2-201ENST00000379516 MYBBP1AQ9BQG0 1328 aaKnown RBP20.48■□□□□ 0.87
SNX2-201ENST00000379516 SLC24A1O60721 1099 aa20.48■□□□□ 0.87
SNX2-201ENST00000379516 SETBP1Q9Y6X0 1596 aa20.48■□□□□ 0.87
SNX2-201ENST00000379516 NEXMIFQ5QGS0 1516 aa20.48■□□□□ 0.87
SNX2-201ENST00000379516 TMC1Q8TDI8 760 aa20.48■□□□□ 0.87
SNX2-201ENST00000379516 TMEM132EQ6IEE7 984 aa20.47■□□□□ 0.87
SNX2-201ENST00000379516 ERVK-7P63135 1459 aa20.47■□□□□ 0.87
SNX2-201ENST00000379516 TRAK1Q9UPV9 953 aa20.46■□□□□ 0.87
SNX2-201ENST00000379516 CLTCQ00610 1675 aaKnown RBP20.45■□□□□ 0.86
SNX2-201ENST00000379516 PARD3Q8TEW0 1356 aa20.45■□□□□ 0.86
SNX2-201ENST00000379516 CC2D1BQ5T0F9 858 aaKnown RBP20.44■□□□□ 0.86
SNX2-201ENST00000379516 ADGRB1O14514 1584 aa20.43■□□□□ 0.86
SNX2-201ENST00000379516 CENPJQ9HC77 1338 aaPredicted RBP20.43■□□□□ 0.86
SNX2-201ENST00000379516 BRD4O60885 1362 aaPredicted RBP20.43■□□□□ 0.86
SNX2-201ENST00000379516 TMEM131LA2VDJ0 1609 aa20.43■□□□□ 0.86
SNX2-201ENST00000379516 ESF1Q9H501 851 aaKnown RBP20.42■□□□□ 0.86
SNX2-201ENST00000379516 STAG3Q9UJ98 1225 aa20.42■□□□□ 0.86
SNX2-201ENST00000379516 PNISRQ8TF01 805 aaKnown RBP20.42■□□□□ 0.86
SNX2-201ENST00000379516 ZFYVE9O95405 1425 aa20.41■□□□□ 0.86
SNX2-201ENST00000379516 KNSTRNQ9Y448 316 aa20.41■□□□□ 0.86
SNX2-201ENST00000379516 NLRP13Q86W25 1043 aa20.4■□□□□ 0.86
SNX2-201ENST00000379516 MYO3AQ8NEV4 1616 aa20.4■□□□□ 0.86
SNX2-201ENST00000379516 SBNO2Q9Y2G9 1366 aa20.4■□□□□ 0.86
SNX2-201ENST00000379516 SENP3Q9H4L4 574 aaPredicted RBP20.39■□□□□ 0.85
SNX2-201ENST00000379516 SUPT16HQ9Y5B9 1047 aaKnown RBP20.39■□□□□ 0.85
SNX2-201ENST00000379516 KDM5AP29375 1690 aaKnown RBP20.38■□□□□ 0.85
SNX2-201ENST00000379516 ZBED9Q6R2W3 1325 aa20.38■□□□□ 0.85
SNX2-201ENST00000379516 MYO5BQ9ULV0 1848 aa20.37■□□□□ 0.85
SNX2-201ENST00000379516 SPATA31D1Q6ZQQ2 1576 aa20.37■□□□□ 0.85
SNX2-201ENST00000379516 ZMYM3Q14202 1370 aa20.36■□□□□ 0.85
SNX2-201ENST00000379516 MYOM1P52179 1685 aa20.34■□□□□ 0.85
SNX2-201ENST00000379516 AMER1Q5JTC6 1135 aaPredicted RBP20.33■□□□□ 0.84
SNX2-201ENST00000379516 LRPPRCP42704 1394 aaKnown RBP20.32■□□□□ 0.84
SNX2-201ENST00000379516 TRHP20396 242 aaPredicted RBP20.32■□□□□ 0.84
SNX2-201ENST00000379516 QRICH2Q9H0J4 1663 aa20.31■□□□□ 0.84
SNX2-201ENST00000379516 A2ML1A8K2U0 1454 aa20.3■□□□□ 0.84
SNX2-201ENST00000379516 NEFLP07196 543 aa20.3■□□□□ 0.84
SNX2-201ENST00000379516 FKBP8Q14318 412 aa20.3■□□□□ 0.84
SNX2-201ENST00000379516 STK26Q9P289 416 aa20.3■□□□□ 0.84
SNX2-201ENST00000379516 ASXL1Q8IXJ9 1541 aa20.3■□□□□ 0.84
SNX2-201ENST00000379516 ARHGEF28Q8N1W1 1705 aaKnown RBP20.27■□□□□ 0.83
SNX2-201ENST00000379516 RIMS2Q9UQ26 1411 aa20.27■□□□□ 0.83
SNX2-201ENST00000379516 SAFB2Q14151 953 aaKnown RBP eCLIP20.26■□□□□ 0.83
SNX2-201ENST00000379516 EVC2Q86UK5 1308 aa20.26■□□□□ 0.83
SNX2-201ENST00000379516 NPC1L1Q9UHC9 1359 aa20.26■□□□□ 0.83
SNX2-201ENST00000379516 CARD14Q9BXL6 1004 aa20.26■□□□□ 0.83
SNX2-201ENST00000379516 SENP3-EIF4A1A0A087X0R7 540 aa20.25■□□□□ 0.83
SNX2-201ENST00000379516 PPP2R1AP30153 589 aa20.24■□□□□ 0.83
SNX2-201ENST00000379516 ALKQ9UM73 1620 aa20.24■□□□□ 0.83
SNX2-201ENST00000379516 YTHDC2Q9H6S0 1430 aaKnown RBP20.24■□□□□ 0.83
SNX2-201ENST00000379516 TNRQ92752 1358 aa20.23■□□□□ 0.83
SNX2-201ENST00000379516 SLC12A5Q9H2X9 1139 aa20.23■□□□□ 0.83
SNX2-201ENST00000379516 PUS7Q96PZ0 661 aaKnown RBP20.22■□□□□ 0.83
SNX2-201ENST00000379516 POGKQ9P215 609 aa20.21■□□□□ 0.83
SNX2-201ENST00000379516 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.21■□□□□ 0.83
SNX2-201ENST00000379516 PRAM1Q96QH2 718 aa20.21■□□□□ 0.83
SNX2-201ENST00000379516 TULP4Q9NRJ4 1543 aa20.21■□□□□ 0.83
SNX2-201ENST00000379516 PTPRMP28827 1452 aa20.2■□□□□ 0.82
SNX2-201ENST00000379516 BCANQ96GW7 911 aa20.2■□□□□ 0.82
SNX2-201ENST00000379516 CABP2Q9NPB3 220 aa20.2■□□□□ 0.82
SNX2-201ENST00000379516 NSD3Q9BZ95 1437 aa20.17■□□□□ 0.82
SNX2-201ENST00000379516 HDGFP51858 240 aaKnown RBP20.17■□□□□ 0.82
SNX2-201ENST00000379516 MINK1Q8N4C8 1332 aaPredicted RBP20.17■□□□□ 0.82
SNX2-201ENST00000379516 SRPK2P78362 688 aaKnown RBP20.16■□□□□ 0.82
SNX2-201ENST00000379516 CEBPAP49715 358 aaPredicted RBP20.15■□□□□ 0.82
SNX2-201ENST00000379516 SMG6Q86US8 1419 aaKnown RBP20.15■□□□□ 0.82
SNX2-201ENST00000379516 NUDCQ9Y266 331 aa20.15■□□□□ 0.82
SNX2-201ENST00000379516 INSRP06213 1382 aa20.14■□□□□ 0.81
SNX2-201ENST00000379516 SALL2Q9Y467 1007 aaPredicted RBP20.13■□□□□ 0.81
SNX2-201ENST00000379516 WDR43Q15061 677 aaKnown RBP eCLIP20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms