RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 TRHP20396 242 aaPredicted RBP24.15■■□□□ 1.46
THUMPD2-201ENST00000378727 MLECQ14165 292 aa24.15■■□□□ 1.46
THUMPD2-201ENST00000378727 IDI1Q13907 227 aa24.14■■□□□ 1.46
THUMPD2-201ENST00000378727 FBXO31Q5XUX0 539 aaPredicted RBP24.14■■□□□ 1.46
THUMPD2-201ENST00000378727 ERVK-7P63135 1459 aa24.14■■□□□ 1.46
THUMPD2-201ENST00000378727 DNAJC5Q9H3Z4 198 aa24.13■■□□□ 1.45
THUMPD2-201ENST00000378727 SLC52A1Q9NWF4 448 aa24.13■■□□□ 1.45
THUMPD2-201ENST00000378727 RPGRIP1LQ68CZ1 1315 aa24.11■■□□□ 1.45
THUMPD2-201ENST00000378727 TESK2Q96S53 571 aa24.11■■□□□ 1.45
THUMPD2-201ENST00000378727 MYO5BQ9ULV0 1848 aa24.1■■□□□ 1.45
THUMPD2-201ENST00000378727 CFAP70Q5T0N1 1121 aa24.1■■□□□ 1.45
THUMPD2-201ENST00000378727 NEXMIFQ5QGS0 1516 aa24.09■■□□□ 1.45
THUMPD2-201ENST00000378727 TMEM131LA2VDJ0 1609 aa24.09■■□□□ 1.45
THUMPD2-201ENST00000378727 SCAF11Q99590 1463 aaKnown RBP24.09■■□□□ 1.45
THUMPD2-201ENST00000378727 POLR3GLQ9BT43 218 aa24.09■■□□□ 1.45
THUMPD2-201ENST00000378727 CCER2I3L3R5 266 aa24.08■■□□□ 1.45
THUMPD2-201ENST00000378727 PIK3C2GO75747 1445 aa24.08■■□□□ 1.45
THUMPD2-201ENST00000378727 SPATA31D1Q6ZQQ2 1576 aa24.08■■□□□ 1.44
THUMPD2-201ENST00000378727 CENPBP07199 599 aaPredicted RBP24.04■■□□□ 1.44
THUMPD2-201ENST00000378727 DISP3Q9P2K9 1392 aa24.04■■□□□ 1.44
THUMPD2-201ENST00000378727 SETBP1Q9Y6X0 1596 aa24.03■■□□□ 1.44
THUMPD2-201ENST00000378727 ZMYM3Q14202 1370 aa24.02■■□□□ 1.44
THUMPD2-201ENST00000378727 C14orf93Q9H972 538 aaKnown RBP24.01■■□□□ 1.43
THUMPD2-201ENST00000378727 NUTM2DQ5VT03 806 aaPredicted RBP23.99■■□□□ 1.43
THUMPD2-201ENST00000378727 ESF1Q9H501 851 aaKnown RBP23.99■■□□□ 1.43
THUMPD2-201ENST00000378727 ZFYVE9O95405 1425 aa23.99■■□□□ 1.43
THUMPD2-201ENST00000378727 VGFO15240 615 aaPredicted RBP23.98■■□□□ 1.43
THUMPD2-201ENST00000378727 PRKRIP1Q9H875 184 aaPredicted RBP23.98■■□□□ 1.43
THUMPD2-201ENST00000378727 ADGRB1O14514 1584 aa23.98■■□□□ 1.43
THUMPD2-201ENST00000378727 EIF3AQ14152 1382 aaKnown RBP23.97■■□□□ 1.43
THUMPD2-201ENST00000378727 TMF1P82094 1093 aa23.97■■□□□ 1.43
THUMPD2-201ENST00000378727 MYO3AQ8NEV4 1616 aa23.93■■□□□ 1.42
THUMPD2-201ENST00000378727 A2ML1A8K2U0 1454 aa23.93■■□□□ 1.42
THUMPD2-201ENST00000378727 TMEM132EQ6IEE7 984 aa23.9■■□□□ 1.42
THUMPD2-201ENST00000378727 STAG3Q9UJ98 1225 aa23.9■■□□□ 1.42
THUMPD2-201ENST00000378727 TNRQ92752 1358 aa23.86■■□□□ 1.41
THUMPD2-201ENST00000378727 ASXL1Q8IXJ9 1541 aa23.86■■□□□ 1.41
THUMPD2-201ENST00000378727 CCDC184Q52MB2 194 aa23.85■■□□□ 1.41
THUMPD2-201ENST00000378727 TRAK1Q9UPV9 953 aa23.85■■□□□ 1.41
THUMPD2-201ENST00000378727 SBNO2Q9Y2G9 1366 aa23.84■■□□□ 1.41
THUMPD2-201ENST00000378727 FER1L4A9Z1Z3 1794 aa23.84■■□□□ 1.41
THUMPD2-201ENST00000378727 PER1O15534 1290 aaPredicted RBP23.83■■□□□ 1.41
THUMPD2-201ENST00000378727 RIMS2Q9UQ26 1411 aa23.83■■□□□ 1.4
THUMPD2-201ENST00000378727 CENPJQ9HC77 1338 aaPredicted RBP23.82■■□□□ 1.4
THUMPD2-201ENST00000378727 QRICH2Q9H0J4 1663 aa23.82■■□□□ 1.4
THUMPD2-201ENST00000378727 ARHGEF28Q8N1W1 1705 aaKnown RBP23.82■■□□□ 1.4
THUMPD2-201ENST00000378727 C3P01024 1663 aa23.82■■□□□ 1.4
THUMPD2-201ENST00000378727 KDM5AP29375 1690 aaKnown RBP23.82■■□□□ 1.4
THUMPD2-201ENST00000378727 CDCA8Q53HL2 280 aa23.82■■□□□ 1.4
THUMPD2-201ENST00000378727 SENP3Q9H4L4 574 aaPredicted RBP23.82■■□□□ 1.4
THUMPD2-201ENST00000378727 MYOM1P52179 1685 aa23.81■■□□□ 1.4
THUMPD2-201ENST00000378727 ALKQ9UM73 1620 aa23.8■■□□□ 1.4
THUMPD2-201ENST00000378727 CNGB1Q14028 1251 aaPredicted RBP23.8■■□□□ 1.4
THUMPD2-201ENST00000378727 PANK3Q9H999 370 aa23.8■■□□□ 1.4
THUMPD2-201ENST00000378727 SLC24A1O60721 1099 aa23.79■■□□□ 1.4
THUMPD2-201ENST00000378727 CEBPAP49715 358 aaPredicted RBP23.79■■□□□ 1.4
THUMPD2-201ENST00000378727 UBR1Q8IWV7 1749 aa23.79■■□□□ 1.4
THUMPD2-201ENST00000378727 MRS2Q9HD23 443 aa23.75■■□□□ 1.39
THUMPD2-201ENST00000378727 SETD1AO15047 1707 aaKnown RBP23.75■■□□□ 1.39
THUMPD2-201ENST00000378727 NLRP1Q9C000 1473 aa23.74■■□□□ 1.39
THUMPD2-201ENST00000378727 KTN1Q86UP2 1357 aaKnown RBP23.74■■□□□ 1.39
THUMPD2-201ENST00000378727 PTPRMP28827 1452 aa23.73■■□□□ 1.39
THUMPD2-201ENST00000378727 NRXN3Q9Y4C0 1643 aa23.73■■□□□ 1.39
THUMPD2-201ENST00000378727 YTHDC2Q9H6S0 1430 aaKnown RBP23.72■■□□□ 1.39
THUMPD2-201ENST00000378727 PARD3Q8TEW0 1356 aa23.71■■□□□ 1.39
THUMPD2-201ENST00000378727 RALBP1Q15311 655 aa23.71■■□□□ 1.39
THUMPD2-201ENST00000378727 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.71■■□□□ 1.39
THUMPD2-201ENST00000378727 STK26Q9P289 416 aa23.71■■□□□ 1.39
THUMPD2-201ENST00000378727 TMEM2Q9UHN6 1383 aa23.7■■□□□ 1.38
THUMPD2-201ENST00000378727 SCAF1Q9H7N4 1312 aaKnown RBP23.69■■□□□ 1.38
THUMPD2-201ENST00000378727 TULP4Q9NRJ4 1543 aa23.67■■□□□ 1.38
THUMPD2-201ENST00000378727 MYBBP1AQ9BQG0 1328 aaKnown RBP23.67■■□□□ 1.38
THUMPD2-201ENST00000378727 PLPPR3Q6T4P5 718 aa23.66■■□□□ 1.38
THUMPD2-201ENST00000378727 HDGFP51858 240 aaKnown RBP23.64■■□□□ 1.38
THUMPD2-201ENST00000378727 CC2D1BQ5T0F9 858 aaKnown RBP23.64■■□□□ 1.38
THUMPD2-201ENST00000378727 RIMS1Q86UR5 1692 aaKnown RBP23.64■■□□□ 1.37
THUMPD2-201ENST00000378727 FAM9BQ8IZU0 186 aa23.63■■□□□ 1.37
THUMPD2-201ENST00000378727 SAFB2Q14151 953 aaKnown RBP eCLIP23.63■■□□□ 1.37
THUMPD2-201ENST00000378727 PRAM1Q96QH2 718 aa23.62■■□□□ 1.37
THUMPD2-201ENST00000378727 KNSTRNQ9Y448 316 aa23.62■■□□□ 1.37
THUMPD2-201ENST00000378727 LRPPRCP42704 1394 aaKnown RBP23.62■■□□□ 1.37
THUMPD2-201ENST00000378727 EVC2Q86UK5 1308 aa23.62■■□□□ 1.37
THUMPD2-201ENST00000378727 AMER1Q5JTC6 1135 aaPredicted RBP23.61■■□□□ 1.37
THUMPD2-201ENST00000378727 BRD4O60885 1362 aaPredicted RBP23.61■■□□□ 1.37
THUMPD2-201ENST00000378727 DLC1Q96QB1 1528 aa23.61■■□□□ 1.37
THUMPD2-201ENST00000378727 ADAMTSL3P82987 1691 aa23.61■■□□□ 1.37
THUMPD2-201ENST00000378727 METP08581 1390 aa23.61■■□□□ 1.37
THUMPD2-201ENST00000378727 PUS7Q96PZ0 661 aaKnown RBP23.6■■□□□ 1.37
THUMPD2-201ENST00000378727 LTKP29376 864 aa23.59■■□□□ 1.37
THUMPD2-201ENST00000378727 HNRNPUQ00839 825 aaKnown RBP eCLIP23.59■■□□□ 1.37
THUMPD2-201ENST00000378727 GTF3C3Q9Y5Q9 886 aa23.59■■□□□ 1.37
THUMPD2-201ENST00000378727 SLIT1O75093 1534 aa23.59■■□□□ 1.37
THUMPD2-201ENST00000378727 ARHGAP23Q9P227 1491 aa23.58■■□□□ 1.37
THUMPD2-201ENST00000378727 ABCC11Q96J66 1382 aa23.58■■□□□ 1.36
THUMPD2-201ENST00000378727 TMC1Q8TDI8 760 aa23.58■■□□□ 1.36
THUMPD2-201ENST00000378727 CARD14Q9BXL6 1004 aa23.58■■□□□ 1.36
THUMPD2-201ENST00000378727 NLRP13Q86W25 1043 aa23.57■■□□□ 1.36
THUMPD2-201ENST00000378727 POGKQ9P215 609 aa23.57■■□□□ 1.36
THUMPD2-201ENST00000378727 NPC1L1Q9UHC9 1359 aa23.57■■□□□ 1.36
THUMPD2-201ENST00000378727 PNISRQ8TF01 805 aaKnown RBP23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms