RNA–Protein interactions for RNA: ENST00000378313.6

C19orf54-201, Transcript of chromosome 19 open reading frame 54, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C19orf54, Length 2,753 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-201ENST00000378313 ATP10BO94823 1461 aa20.76■□□□□ 0.91
C19orf54-201ENST00000378313 USP19O94966 1318 aa20.74■□□□□ 0.91
C19orf54-201ENST00000378313 ATP10AO60312 1499 aa20.74■□□□□ 0.91
C19orf54-201ENST00000378313 KNSTRNQ9Y448 316 aa20.74■□□□□ 0.91
C19orf54-201ENST00000378313 NKTRP30414 1462 aaKnown RBP20.74■□□□□ 0.91
C19orf54-201ENST00000378313 ABCC2Q92887 1545 aa20.73■□□□□ 0.91
C19orf54-201ENST00000378313 IQGAP3Q86VI3 1631 aa20.73■□□□□ 0.91
C19orf54-201ENST00000378313 AMER1Q5JTC6 1135 aaPredicted RBP20.72■□□□□ 0.91
C19orf54-201ENST00000378313 MAST1Q9Y2H9 1570 aa20.72■□□□□ 0.91
C19orf54-201ENST00000378313 SYNMO15061 1565 aa20.72■□□□□ 0.91
C19orf54-201ENST00000378313 SAMD9LQ8IVG5 1584 aa20.72■□□□□ 0.91
C19orf54-201ENST00000378313 BECN1Q14457 450 aa20.71■□□□□ 0.91
C19orf54-201ENST00000378313 NPC1L1Q9UHC9 1359 aa20.71■□□□□ 0.91
C19orf54-201ENST00000378313 MAPK8IP3Q9UPT6 1336 aa20.71■□□□□ 0.91
C19orf54-201ENST00000378313 NINLQ9Y2I6 1382 aa20.7■□□□□ 0.9
C19orf54-201ENST00000378313 ASXL1Q8IXJ9 1541 aa20.69■□□□□ 0.9
C19orf54-201ENST00000378313 L1TD1Q5T7N2 865 aaKnown RBP20.68■□□□□ 0.9
C19orf54-201ENST00000378313 NGEFQ8N5V2 710 aa20.68■□□□□ 0.9
C19orf54-201ENST00000378313 CGNL1Q0VF96 1302 aa20.68■□□□□ 0.9
C19orf54-201ENST00000378313 PREX2Q70Z35 1606 aa20.68■□□□□ 0.9
C19orf54-201ENST00000378313 DNAJC5BQ9UF47 199 aa20.68■□□□□ 0.9
C19orf54-201ENST00000378313 PDE3AQ14432 1141 aa20.68■□□□□ 0.9
C19orf54-201ENST00000378313 CDCA8Q53HL2 280 aa20.68■□□□□ 0.9
C19orf54-201ENST00000378313 PKNOX2Q96KN3 472 aa20.68■□□□□ 0.9
C19orf54-201ENST00000378313 IQGAP1P46940 1657 aa20.67■□□□□ 0.9
C19orf54-201ENST00000378313 CDC42BPBQ9Y5S2 1711 aa20.67■□□□□ 0.9
C19orf54-201ENST00000378313 E9PSI1 815 aa20.67■□□□□ 0.9
C19orf54-201ENST00000378313 JPH4Q96JJ6 628 aa20.66■□□□□ 0.9
C19orf54-201ENST00000378313 IGHDP01880 384 aa20.66■□□□□ 0.9
C19orf54-201ENST00000378313 POGKQ9P215 609 aa20.65■□□□□ 0.9
C19orf54-201ENST00000378313 ZMYM3Q14202 1370 aa20.65■□□□□ 0.9
C19orf54-201ENST00000378313 NLRP1Q9C000 1473 aa20.65■□□□□ 0.9
C19orf54-201ENST00000378313 PLXNC1O60486 1568 aa20.65■□□□□ 0.9
C19orf54-201ENST00000378313 BCAR3O75815 825 aa20.63■□□□□ 0.89
C19orf54-201ENST00000378313 CHMP7Q8WUX9 453 aaPredicted RBP20.63■□□□□ 0.89
C19orf54-201ENST00000378313 ANTXR1Q9H6X2 564 aa20.62■□□□□ 0.89
C19orf54-201ENST00000378313 SPINK5Q9NQ38 1064 aaPredicted RBP20.62■□□□□ 0.89
C19orf54-201ENST00000378313 MADDQ8WXG6 1647 aa20.61■□□□□ 0.89
C19orf54-201ENST00000378313 AAMPQ13685 434 aa20.61■□□□□ 0.89
C19orf54-201ENST00000378313 CLUAP1Q96AJ1 413 aa20.61■□□□□ 0.89
C19orf54-201ENST00000378313 SEC24BO95487 1268 aa20.6■□□□□ 0.89
C19orf54-201ENST00000378313 APAF1O14727 1248 aa20.59■□□□□ 0.89
C19orf54-201ENST00000378313 MYOM1P52179 1685 aa20.59■□□□□ 0.89
C19orf54-201ENST00000378313 SCAPERQ9BY12 1400 aa20.58■□□□□ 0.89
C19orf54-201ENST00000378313 CCDC146Q8IYE0 955 aa20.58■□□□□ 0.88
C19orf54-201ENST00000378313 SYCP2Q9BX26 1530 aa20.58■□□□□ 0.88
C19orf54-201ENST00000378313 SCAF11Q99590 1463 aaKnown RBP20.58■□□□□ 0.88
C19orf54-201ENST00000378313 GLIPR1L2Q4G1C9 344 aa20.57■□□□□ 0.88
C19orf54-201ENST00000378313 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.57■□□□□ 0.88
C19orf54-201ENST00000378313 STAC3Q96MF2 364 aa20.57■□□□□ 0.88
C19orf54-201ENST00000378313 DUOX2Q9NRD8 1548 aa20.56■□□□□ 0.88
C19orf54-201ENST00000378313 RRAGDQ9NQL2 400 aaPredicted RBP20.56■□□□□ 0.88
C19orf54-201ENST00000378313 CENPJQ9HC77 1338 aaPredicted RBP20.55■□□□□ 0.88
C19orf54-201ENST00000378313 UPF2Q9HAU5 1272 aaKnown RBP20.55■□□□□ 0.88
C19orf54-201ENST00000378313 PMFBP1Q8TBY8 1022 aa20.54■□□□□ 0.88
C19orf54-201ENST00000378313 TBC1D32Q96NH3 1257 aa20.54■□□□□ 0.88
C19orf54-201ENST00000378313 SLKQ9H2G2 1235 aaPredicted RBP20.54■□□□□ 0.88
C19orf54-201ENST00000378313 SPHKAPQ2M3C7 1700 aa20.53■□□□□ 0.88
C19orf54-201ENST00000378313 KDM5AP29375 1690 aaKnown RBP20.52■□□□□ 0.87
C19orf54-201ENST00000378313 FSD2A1L4K1 749 aa20.51■□□□□ 0.87
C19orf54-201ENST00000378313 COG6Q9Y2V7 657 aa20.51■□□□□ 0.87
C19orf54-201ENST00000378313 CANXP27824 592 aaKnown RBP20.5■□□□□ 0.87
C19orf54-201ENST00000378313 PANK1Q8TE04 598 aa20.5■□□□□ 0.87
C19orf54-201ENST00000378313 TBC1D2Q9BYX2 928 aa20.5■□□□□ 0.87
C19orf54-201ENST00000378313 DMRT2Q9Y5R5 561 aa20.5■□□□□ 0.87
C19orf54-201ENST00000378313 TTC37Q6PGP7 1564 aa20.49■□□□□ 0.87
C19orf54-201ENST00000378313 ARHGAP5Q13017 1502 aa20.49■□□□□ 0.87
C19orf54-201ENST00000378313 GOLGA6L3A6NEY3 463 aa20.48■□□□□ 0.87
C19orf54-201ENST00000378313 SLC24A1O60721 1099 aa20.48■□□□□ 0.87
C19orf54-201ENST00000378313 WWC1Q8IX03 1113 aa20.47■□□□□ 0.87
C19orf54-201ENST00000378313 KIAA1210Q9ULL0 1709 aa20.47■□□□□ 0.87
C19orf54-201ENST00000378313 ERCC6Q03468 1493 aa20.47■□□□□ 0.87
C19orf54-201ENST00000378313 XRCC6P12956 609 aaKnown RBP eCLIP20.47■□□□□ 0.87
C19orf54-201ENST00000378313 POLR3AO14802 1390 aaPredicted RBP20.46■□□□□ 0.87
C19orf54-201ENST00000378313 CEP152O94986 1710 aa20.46■□□□□ 0.87
C19orf54-201ENST00000378313 TRPM2O94759 1503 aa20.46■□□□□ 0.87
C19orf54-201ENST00000378313 MCM4P33991 863 aa20.45■□□□□ 0.86
C19orf54-201ENST00000378313 FBLN2P98095 1184 aa20.45■□□□□ 0.86
C19orf54-201ENST00000378313 CLCN1P35523 988 aa20.44■□□□□ 0.86
C19orf54-201ENST00000378313 RARSP54136 660 aaKnown RBP20.43■□□□□ 0.86
C19orf54-201ENST00000378313 PDZRN3Q9UPQ7 1066 aa20.43■□□□□ 0.86
C19orf54-201ENST00000378313 PCDHB15Q9Y5E8 787 aa20.42■□□□□ 0.86
C19orf54-201ENST00000378313 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.42■□□□□ 0.86
C19orf54-201ENST00000378313 RWDD1Q9H446 243 aaPredicted RBP20.42■□□□□ 0.86
C19orf54-201ENST00000378313 PTPRTO14522 1441 aa20.41■□□□□ 0.86
C19orf54-201ENST00000378313 ZMYND15Q9H091 742 aa20.4■□□□□ 0.86
C19orf54-201ENST00000378313 CHMP5Q9NZZ3 219 aa20.4■□□□□ 0.86
C19orf54-201ENST00000378313 PNNQ9H307 717 aaKnown RBP20.39■□□□□ 0.85
C19orf54-201ENST00000378313 ERVK-7P63135 1459 aa20.39■□□□□ 0.85
C19orf54-201ENST00000378313 PHF23Q9BUL5 403 aaPredicted RBP20.39■□□□□ 0.85
C19orf54-201ENST00000378313 MRE11P49959 708 aa20.38■□□□□ 0.85
C19orf54-201ENST00000378313 WDR63Q8IWG1 891 aa20.38■□□□□ 0.85
C19orf54-201ENST00000378313 ISY1Q9ULR0 285 aaKnown RBP20.38■□□□□ 0.85
C19orf54-201ENST00000378313 NEURL4Q96JN8 1562 aa20.38■□□□□ 0.85
C19orf54-201ENST00000378313 IQSEC2Q5JU85 1478 aa20.37■□□□□ 0.85
C19orf54-201ENST00000378313 KANK1Q14678 1352 aa20.37■□□□□ 0.85
C19orf54-201ENST00000378313 VSIG10Q8N0Z9 540 aa20.37■□□□□ 0.85
C19orf54-201ENST00000378313 CARD14Q9BXL6 1004 aa20.37■□□□□ 0.85
C19orf54-201ENST00000378313 SHPRHQ149N8 1683 aa20.37■□□□□ 0.85
C19orf54-201ENST00000378313 RTEL1-TNFRSF6BF6WH68 1400 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms