RNA–Protein interactions for RNA: ENST00000377798.8

POLR1E-202, Transcript of RNA polymerase I subunit E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR1E, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1E-202ENST00000377798 RPGRIP1LQ68CZ1 1315 aa20.76■□□□□ 0.91
POLR1E-202ENST00000377798 MYO5BQ9ULV0 1848 aa20.76■□□□□ 0.91
POLR1E-202ENST00000377798 DDX10Q13206 875 aaKnown RBP20.75■□□□□ 0.91
POLR1E-202ENST00000377798 WASHC2AQ641Q2 1341 aa20.74■□□□□ 0.91
POLR1E-202ENST00000377798 NEXMIFQ5QGS0 1516 aa20.74■□□□□ 0.91
POLR1E-202ENST00000377798 ADGRF5Q8IZF2 1346 aa20.73■□□□□ 0.91
POLR1E-202ENST00000377798 FER1L4A9Z1Z3 1794 aa20.72■□□□□ 0.91
POLR1E-202ENST00000377798 CCDC7Q96M83 1385 aa20.71■□□□□ 0.91
POLR1E-202ENST00000377798 IQGAP1P46940 1657 aa20.7■□□□□ 0.91
POLR1E-202ENST00000377798 PIK3C2GO75747 1445 aa20.7■□□□□ 0.9
POLR1E-202ENST00000377798 C11orf95C9JLR9 678 aaPredicted RBP20.69■□□□□ 0.9
POLR1E-202ENST00000377798 MIER1Q8N108 512 aa20.69■□□□□ 0.9
POLR1E-202ENST00000377798 ST20-MTHFSA0A0A6YYL1 179 aa20.69■□□□□ 0.9
POLR1E-202ENST00000377798 KIF7Q2M1P5 1343 aa20.66■□□□□ 0.9
POLR1E-202ENST00000377798 C3P01024 1663 aa20.66■□□□□ 0.9
POLR1E-202ENST00000377798 ZFYVE9O95405 1425 aa20.66■□□□□ 0.9
POLR1E-202ENST00000377798 SCAF11Q99590 1463 aaKnown RBP20.66■□□□□ 0.9
POLR1E-202ENST00000377798 SETBP1Q9Y6X0 1596 aa20.65■□□□□ 0.9
POLR1E-202ENST00000377798 VGFO15240 615 aaPredicted RBP20.65■□□□□ 0.9
POLR1E-202ENST00000377798 TNRQ92752 1358 aa20.65■□□□□ 0.9
POLR1E-202ENST00000377798 CFAP70Q5T0N1 1121 aa20.64■□□□□ 0.9
POLR1E-202ENST00000377798 A2ML1A8K2U0 1454 aa20.64■□□□□ 0.9
POLR1E-202ENST00000377798 STAG3Q9UJ98 1225 aa20.64■□□□□ 0.89
POLR1E-202ENST00000377798 KDM5AP29375 1690 aaKnown RBP20.63■□□□□ 0.89
POLR1E-202ENST00000377798 C14orf93Q9H972 538 aaKnown RBP20.61■□□□□ 0.89
POLR1E-202ENST00000377798 NUTM2DQ5VT03 806 aaPredicted RBP20.59■□□□□ 0.89
POLR1E-202ENST00000377798 ADGRB1O14514 1584 aa20.59■□□□□ 0.89
POLR1E-202ENST00000377798 EIF3AQ14152 1382 aaKnown RBP20.59■□□□□ 0.89
POLR1E-202ENST00000377798 UBR1Q8IWV7 1749 aa20.58■□□□□ 0.88
POLR1E-202ENST00000377798 TESK2Q96S53 571 aa20.58■□□□□ 0.88
POLR1E-202ENST00000377798 NLRP1Q9C000 1473 aa20.57■□□□□ 0.88
POLR1E-202ENST00000377798 CEBPAP49715 358 aaPredicted RBP20.56■□□□□ 0.88
POLR1E-202ENST00000377798 ADAMTSL3P82987 1691 aa20.55■□□□□ 0.88
POLR1E-202ENST00000377798 RIMS1Q86UR5 1692 aaKnown RBP20.55■□□□□ 0.88
POLR1E-202ENST00000377798 RIMS2Q9UQ26 1411 aa20.55■□□□□ 0.88
POLR1E-202ENST00000377798 MYO3AQ8NEV4 1616 aa20.54■□□□□ 0.88
POLR1E-202ENST00000377798 POLR3GLQ9BT43 218 aa20.52■□□□□ 0.87
POLR1E-202ENST00000377798 DISP3Q9P2K9 1392 aa20.51■□□□□ 0.87
POLR1E-202ENST00000377798 ANP32CO43423 234 aa20.51■□□□□ 0.87
POLR1E-202ENST00000377798 TMF1P82094 1093 aa20.51■□□□□ 0.87
POLR1E-202ENST00000377798 ASXL1Q8IXJ9 1541 aa20.5■□□□□ 0.87
POLR1E-202ENST00000377798 ALKQ9UM73 1620 aa20.49■□□□□ 0.87
POLR1E-202ENST00000377798 TMEM132EQ6IEE7 984 aa20.49■□□□□ 0.87
POLR1E-202ENST00000377798 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.49■□□□□ 0.87
POLR1E-202ENST00000377798 TMEM2Q9UHN6 1383 aa20.47■□□□□ 0.87
POLR1E-202ENST00000377798 ARHGEF28Q8N1W1 1705 aaKnown RBP20.47■□□□□ 0.87
POLR1E-202ENST00000377798 SETD1AO15047 1707 aaKnown RBP20.46■□□□□ 0.87
POLR1E-202ENST00000377798 SLC24A1O60721 1099 aa20.46■□□□□ 0.87
POLR1E-202ENST00000377798 HDGFP51858 240 aaKnown RBP20.46■□□□□ 0.87
POLR1E-202ENST00000377798 PLPPR3Q6T4P5 718 aa20.46■□□□□ 0.87
POLR1E-202ENST00000377798 SBNO2Q9Y2G9 1366 aa20.46■□□□□ 0.87
POLR1E-202ENST00000377798 TRAK1Q9UPV9 953 aa20.45■□□□□ 0.86
POLR1E-202ENST00000377798 QRICH2Q9H0J4 1663 aa20.45■□□□□ 0.86
POLR1E-202ENST00000377798 NRXN3Q9Y4C0 1643 aa20.45■□□□□ 0.86
POLR1E-202ENST00000377798 CENPJQ9HC77 1338 aaPredicted RBP20.44■□□□□ 0.86
POLR1E-202ENST00000377798 SLIT1O75093 1534 aa20.42■□□□□ 0.86
POLR1E-202ENST00000377798 CDCA8Q53HL2 280 aa20.42■□□□□ 0.86
POLR1E-202ENST00000377798 SENP3Q9H4L4 574 aaPredicted RBP20.42■□□□□ 0.86
POLR1E-202ENST00000377798 PTPRMP28827 1452 aa20.42■□□□□ 0.86
POLR1E-202ENST00000377798 YTHDC2Q9H6S0 1430 aaKnown RBP20.41■□□□□ 0.86
POLR1E-202ENST00000377798 CEP170BQ9Y4F5 1589 aaPredicted RBP20.41■□□□□ 0.86
POLR1E-202ENST00000377798 ARHGAP23Q9P227 1491 aa20.4■□□□□ 0.86
POLR1E-202ENST00000377798 CCER2I3L3R5 266 aa20.39■□□□□ 0.85
POLR1E-202ENST00000377798 ZNF142P52746 1687 aaPredicted RBP20.38■□□□□ 0.85
POLR1E-202ENST00000377798 THEMISQ8N1K5 641 aaPredicted RBP20.37■□□□□ 0.85
POLR1E-202ENST00000377798 MYOM1P52179 1685 aa20.36■□□□□ 0.85
POLR1E-202ENST00000377798 PLEKHG1Q9ULL1 1385 aa20.36■□□□□ 0.85
POLR1E-202ENST00000377798 SETD1BQ9UPS6 1966 aaKnown RBP20.36■□□□□ 0.85
POLR1E-202ENST00000377798 PRKRIP1Q9H875 184 aaPredicted RBP20.35■□□□□ 0.85
POLR1E-202ENST00000377798 STK26Q9P289 416 aa20.35■□□□□ 0.85
POLR1E-202ENST00000377798 LTKP29376 864 aa20.35■□□□□ 0.85
POLR1E-202ENST00000377798 DLC1Q96QB1 1528 aa20.34■□□□□ 0.85
POLR1E-202ENST00000377798 EID1Q9Y6B2 187 aa20.34■□□□□ 0.85
POLR1E-202ENST00000377798 LRPPRCP42704 1394 aaKnown RBP20.34■□□□□ 0.85
POLR1E-202ENST00000377798 TXNDC2Q86VQ3 553 aa20.33■□□□□ 0.85
POLR1E-202ENST00000377798 ADAMTS13Q76LX8 1427 aa20.32■□□□□ 0.84
POLR1E-202ENST00000377798 KNDC1Q76NI1 1749 aa20.32■□□□□ 0.84
POLR1E-202ENST00000377798 METP08581 1390 aa20.31■□□□□ 0.84
POLR1E-202ENST00000377798 ABCC11Q96J66 1382 aa20.3■□□□□ 0.84
POLR1E-202ENST00000377798 TULP4Q9NRJ4 1543 aa20.3■□□□□ 0.84
POLR1E-202ENST00000377798 BCANQ96GW7 911 aa20.3■□□□□ 0.84
POLR1E-202ENST00000377798 PRAM1Q96QH2 718 aa20.29■□□□□ 0.84
POLR1E-202ENST00000377798 PANK3Q9H999 370 aa20.29■□□□□ 0.84
POLR1E-202ENST00000377798 MED14O60244 1454 aa20.28■□□□□ 0.84
POLR1E-202ENST00000377798 YTHDC1Q96MU7 727 aaKnown RBP20.28■□□□□ 0.84
POLR1E-202ENST00000377798 PER1O15534 1290 aaPredicted RBP20.28■□□□□ 0.84
POLR1E-202ENST00000377798 EVC2Q86UK5 1308 aa20.27■□□□□ 0.84
POLR1E-202ENST00000377798 POGKQ9P215 609 aa20.27■□□□□ 0.84
POLR1E-202ENST00000377798 TECPR2O15040 1411 aa20.27■□□□□ 0.83
POLR1E-202ENST00000377798 DIP2AQ14689 1571 aa20.26■□□□□ 0.83
POLR1E-202ENST00000377798 CPS1P31327 1500 aa20.26■□□□□ 0.83
POLR1E-202ENST00000377798 SAFB2Q14151 953 aaKnown RBP eCLIP20.26■□□□□ 0.83
POLR1E-202ENST00000377798 PUS7Q96PZ0 661 aaKnown RBP20.26■□□□□ 0.83
POLR1E-202ENST00000377798 KTN1Q86UP2 1357 aaKnown RBP20.25■□□□□ 0.83
POLR1E-202ENST00000377798 FAM135BQ49AJ0 1406 aa20.23■□□□□ 0.83
POLR1E-202ENST00000377798 SIRT1Q96EB6 747 aa20.22■□□□□ 0.83
POLR1E-202ENST00000377798 MINK1Q8N4C8 1332 aaPredicted RBP20.21■□□□□ 0.83
POLR1E-202ENST00000377798 TBX22Q9Y458 520 aa20.21■□□□□ 0.83
POLR1E-202ENST00000377798 CNGB1Q14028 1251 aaPredicted RBP20.2■□□□□ 0.82
POLR1E-202ENST00000377798 RALBP1Q15311 655 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms