RNA–Protein interactions for RNA: ENST00000376581.9

FARP1-202, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 2 BASIC

Gene FARP1, Length 1,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-202ENST00000376581 LTKP29376 864 aa13.37□□□□□ -0.27
FARP1-202ENST00000376581 PROSER2Q86WR7 435 aaPredicted RBP13.37□□□□□ -0.27
FARP1-202ENST00000376581 CLEC11AQ9Y240 323 aa13.37□□□□□ -0.27
FARP1-202ENST00000376581 ROBO1Q9Y6N7 1651 aa13.37□□□□□ -0.27
FARP1-202ENST00000376581 ERVK-7P63135 1459 aa13.36□□□□□ -0.27
FARP1-202ENST00000376581 ABCC3O15438 1527 aa13.36□□□□□ -0.27
FARP1-202ENST00000376581 SETD1AO15047 1707 aaKnown RBP13.36□□□□□ -0.27
FARP1-202ENST00000376581 ARHGEF5Q12774 1597 aa13.35□□□□□ -0.27
FARP1-202ENST00000376581 EIF2AK4Q9P2K8 1649 aaKnown RBP13.35□□□□□ -0.27
FARP1-202ENST00000376581 PHLPP1O60346 1717 aa13.34□□□□□ -0.27
FARP1-202ENST00000376581 KCNA6P17658 529 aa13.34□□□□□ -0.27
FARP1-202ENST00000376581 SLIT1O75093 1534 aa13.34□□□□□ -0.27
FARP1-202ENST00000376581 TMEM94Q12767 1356 aa13.33□□□□□ -0.27
FARP1-202ENST00000376581 NCOA2Q15596 1464 aa13.32□□□□□ -0.28
FARP1-202ENST00000376581 LRRC9Q6ZRR7 1453 aa13.32□□□□□ -0.28
FARP1-202ENST00000376581 ARHGAP23Q9P227 1491 aa13.32□□□□□ -0.28
FARP1-202ENST00000376581 MEX3CQ5U5Q3 659 aaKnown RBP13.31□□□□□ -0.28
FARP1-202ENST00000376581 ZNF772Q68DY9 489 aaPredicted RBP13.31□□□□□ -0.28
FARP1-202ENST00000376581 BCANQ96GW7 911 aa13.31□□□□□ -0.28
FARP1-202ENST00000376581 SLAIN2Q9P270 581 aa13.31□□□□□ -0.28
FARP1-202ENST00000376581 JCADQ9P266 1359 aa13.31□□□□□ -0.28
FARP1-202ENST00000376581 FXR2P51116 673 aaKnown RBP eCLIP13.3□□□□□ -0.28
FARP1-202ENST00000376581 UPF1Q92900 1129 aaKnown RBP eCLIP13.3□□□□□ -0.28
FARP1-202ENST00000376581 MSH6P52701 1360 aa13.3□□□□□ -0.28
FARP1-202ENST00000376581 PIP4P2Q8N4L2 257 aa13.29□□□□□ -0.28
FARP1-202ENST00000376581 TMEM2Q9UHN6 1383 aa13.29□□□□□ -0.28
FARP1-202ENST00000376581 MAST1Q9Y2H9 1570 aa13.28□□□□□ -0.28
FARP1-202ENST00000376581 PIK3C2BO00750 1634 aa13.28□□□□□ -0.28
FARP1-202ENST00000376581 TRIM52Q96A61 297 aa13.28□□□□□ -0.28
FARP1-202ENST00000376581 RBM33Q96EV2 1170 aaKnown RBP13.28□□□□□ -0.28
FARP1-202ENST00000376581 SLC26A8Q96RN1 970 aa13.28□□□□□ -0.28
FARP1-202ENST00000376581 KDM5AP29375 1690 aaKnown RBP13.28□□□□□ -0.28
FARP1-202ENST00000376581 POTEHQ6S545 545 aa13.27□□□□□ -0.29
FARP1-202ENST00000376581 ARHGAP31Q2M1Z3 1444 aa13.27□□□□□ -0.29
FARP1-202ENST00000376581 KANK1Q14678 1352 aa13.26□□□□□ -0.29
FARP1-202ENST00000376581 SPATA31A6Q5VVP1 1343 aa13.26□□□□□ -0.29
FARP1-202ENST00000376581 DUOX2Q9NRD8 1548 aa13.26□□□□□ -0.29
FARP1-202ENST00000376581 MROH1Q8NDA8 1641 aa13.25□□□□□ -0.29
FARP1-202ENST00000376581 PRDM15P57071 1507 aaPredicted RBP13.25□□□□□ -0.29
FARP1-202ENST00000376581 RXRBP28702 533 aa13.25□□□□□ -0.29
FARP1-202ENST00000376581 EFCAB6Q5THR3 1501 aa13.24□□□□□ -0.29
FARP1-202ENST00000376581 HDGFP51858 240 aaKnown RBP13.24□□□□□ -0.29
FARP1-202ENST00000376581 MAP3K1Q13233 1512 aa13.23□□□□□ -0.29
FARP1-202ENST00000376581 NKTRP30414 1462 aaKnown RBP13.23□□□□□ -0.29
FARP1-202ENST00000376581 CHD2O14647 1828 aaKnown RBP13.23□□□□□ -0.29
FARP1-202ENST00000376581 IDI1Q13907 227 aa13.23□□□□□ -0.29
FARP1-202ENST00000376581 C14orf37Q86TY3 774 aa13.23□□□□□ -0.29
FARP1-202ENST00000376581 TET3O43151 1660 aa13.23□□□□□ -0.29
FARP1-202ENST00000376581 PRR29P0C7W0 189 aa13.22□□□□□ -0.29
FARP1-202ENST00000376581 FGD6Q6ZV73 1430 aa13.21□□□□□ -0.3
FARP1-202ENST00000376581 RRP7BPQ9NSQ0 103 aa13.2□□□□□ -0.3
FARP1-202ENST00000376581 MYOM3Q5VTT5 1437 aa13.2□□□□□ -0.3
FARP1-202ENST00000376581 ATF3P18847 181 aa13.19□□□□□ -0.3
FARP1-202ENST00000376581 SLC52A1Q9NWF4 448 aa13.19□□□□□ -0.3
FARP1-202ENST00000376581 COL16A1Q07092 1604 aaPredicted RBP13.19□□□□□ -0.3
FARP1-202ENST00000376581 NWD1Q149M9 1564 aa13.19□□□□□ -0.3
FARP1-202ENST00000376581 PPP1R15AO75807 674 aaPredicted RBP13.18□□□□□ -0.3
FARP1-202ENST00000376581 CADPS2Q86UW7 1296 aa13.18□□□□□ -0.3
FARP1-202ENST00000376581 ERBINQ96RT1 1412 aa13.18□□□□□ -0.3
FARP1-202ENST00000376581 KIF15Q9NS87 1388 aa13.18□□□□□ -0.3
FARP1-202ENST00000376581 SHPRHQ149N8 1683 aa13.18□□□□□ -0.3
FARP1-202ENST00000376581 NUTM2BA6NNL0 878 aaPredicted RBP13.17□□□□□ -0.3
FARP1-202ENST00000376581 NUTM2EB1AL46 878 aaPredicted RBP13.17□□□□□ -0.3
FARP1-202ENST00000376581 NUTM2AQ8IVF1 878 aaPredicted RBP13.17□□□□□ -0.3
FARP1-202ENST00000376581 MYO5BQ9ULV0 1848 aa13.16□□□□□ -0.3
FARP1-202ENST00000376581 NCOA3Q9Y6Q9 1424 aa13.16□□□□□ -0.3
FARP1-202ENST00000376581 C19orf44Q9H6X5 657 aa13.16□□□□□ -0.3
FARP1-202ENST00000376581 CDK12Q9NYV4 1490 aaPredicted RBP13.16□□□□□ -0.3
FARP1-202ENST00000376581 LRP6O75581 1613 aa13.15□□□□□ -0.3
FARP1-202ENST00000376581 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.14□□□□□ -0.31
FARP1-202ENST00000376581 TBX22Q9Y458 520 aa13.14□□□□□ -0.31
FARP1-202ENST00000376581 ADGRB3O60242 1522 aa13.13□□□□□ -0.31
FARP1-202ENST00000376581 CROCC2H7BZ55 1655 aa13.13□□□□□ -0.31
FARP1-202ENST00000376581 PRKAR2AP13861 404 aaKnown RBP13.13□□□□□ -0.31
FARP1-202ENST00000376581 PLEKHG1Q9ULL1 1385 aa13.12□□□□□ -0.31
FARP1-202ENST00000376581 NUTM2DQ5VT03 806 aaPredicted RBP13.12□□□□□ -0.31
FARP1-202ENST00000376581 CHADLQ6NUI6 762 aa13.12□□□□□ -0.31
FARP1-202ENST00000376581 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.12□□□□□ -0.31
FARP1-202ENST00000376581 AHDC1Q5TGY3 1603 aaPredicted RBP13.12□□□□□ -0.31
FARP1-202ENST00000376581 AFF2P51816 1311 aa13.12□□□□□ -0.31
FARP1-202ENST00000376581 RBM6P78332 1123 aaKnown RBP13.11□□□□□ -0.31
FARP1-202ENST00000376581 QTRT2Q9H974 415 aaKnown RBP13.11□□□□□ -0.31
FARP1-202ENST00000376581 LMTK2Q8IWU2 1503 aa13.1□□□□□ -0.31
FARP1-202ENST00000376581 LRRC59Q96AG4 307 aaKnown RBP13.1□□□□□ -0.31
FARP1-202ENST00000376581 NGLY1Q96IV0 654 aa13.1□□□□□ -0.31
FARP1-202ENST00000376581 NOS1P29475 1434 aa13.1□□□□□ -0.31
FARP1-202ENST00000376581 ANKRD30AQ9BXX3 1397 aa13.09□□□□□ -0.31
FARP1-202ENST00000376581 GCC2Q8IWJ2 1684 aa13.09□□□□□ -0.31
FARP1-202ENST00000376581 CHGAP10645 457 aaKnown RBP13.09□□□□□ -0.31
FARP1-202ENST00000376581 CREBZFQ9NS37 354 aa13.09□□□□□ -0.31
FARP1-202ENST00000376581 ZRANB1Q9UGI0 708 aa13.09□□□□□ -0.31
FARP1-202ENST00000376581 ABCC5O15440 1437 aa13.08□□□□□ -0.32
FARP1-202ENST00000376581 RIMS2Q9UQ26 1411 aa13.08□□□□□ -0.32
FARP1-202ENST00000376581 KANK4Q5T7N3 995 aaPredicted RBP13.08□□□□□ -0.32
FARP1-202ENST00000376581 C8orf37Q96NL8 207 aa13.08□□□□□ -0.32
FARP1-202ENST00000376581 CHIC2Q9UKJ5 165 aa13.08□□□□□ -0.32
FARP1-202ENST00000376581 BRINP3Q76B58 766 aa13.07□□□□□ -0.32
FARP1-202ENST00000376581 PIK3R4Q99570 1358 aa13.07□□□□□ -0.32
FARP1-202ENST00000376581 PTPN23Q9H3S7 1636 aa13.06□□□□□ -0.32
FARP1-202ENST00000376581 RPRD2Q5VT52 1461 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms