RNA–Protein interactions for RNA: ENST00000376230.7

ZNF550-203, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 3,719 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-203ENST00000376230 TESK2Q96S53 571 aa12.98□□□□□ -0.33
ZNF550-203ENST00000376230 SLKQ9H2G2 1235 aaPredicted RBP12.98□□□□□ -0.33
ZNF550-203ENST00000376230 CEP170Q5SW79 1584 aa12.98□□□□□ -0.33
ZNF550-203ENST00000376230 PRKCSHP14314 528 aaPredicted RBP12.98□□□□□ -0.33
ZNF550-203ENST00000376230 ERBINQ96RT1 1412 aa12.98□□□□□ -0.33
ZNF550-203ENST00000376230 DHX29Q7Z478 1369 aaKnown RBP12.97□□□□□ -0.33
ZNF550-203ENST00000376230 SMG6Q86US8 1419 aaKnown RBP12.97□□□□□ -0.33
ZNF550-203ENST00000376230 PBRM1Q86U86 1689 aa12.97□□□□□ -0.33
ZNF550-203ENST00000376230 TPRNQ4KMQ1 711 aa12.97□□□□□ -0.33
ZNF550-203ENST00000376230 BRD4O60885 1362 aaPredicted RBP12.96□□□□□ -0.33
ZNF550-203ENST00000376230 TEX14Q8IWB6 1497 aa12.96□□□□□ -0.34
ZNF550-203ENST00000376230 ITPRIPQ8IWB1 547 aa12.96□□□□□ -0.34
ZNF550-203ENST00000376230 TCP11L2Q8N4U5 519 aa12.96□□□□□ -0.34
ZNF550-203ENST00000376230 LTV1Q96GA3 475 aaPredicted RBP12.95□□□□□ -0.34
ZNF550-203ENST00000376230 PRAM1Q96QH2 718 aa12.95□□□□□ -0.34
ZNF550-203ENST00000376230 SMC4Q9NTJ3 1288 aa12.95□□□□□ -0.34
ZNF550-203ENST00000376230 NUTM2GQ5VZR2 741 aa12.95□□□□□ -0.34
ZNF550-203ENST00000376230 WAPLQ7Z5K2 1190 aa12.95□□□□□ -0.34
ZNF550-203ENST00000376230 SPINK5Q9NQ38 1064 aaPredicted RBP12.94□□□□□ -0.34
ZNF550-203ENST00000376230 ZNF428Q96B54 188 aa12.94□□□□□ -0.34
ZNF550-203ENST00000376230 RBM33Q96EV2 1170 aaKnown RBP12.94□□□□□ -0.34
ZNF550-203ENST00000376230 PER1O15534 1290 aaPredicted RBP12.93□□□□□ -0.34
ZNF550-203ENST00000376230 BACH2Q9BYV9 841 aa12.93□□□□□ -0.34
ZNF550-203ENST00000376230 THUMPD2Q9BTF0 503 aaKnown RBP12.93□□□□□ -0.34
ZNF550-203ENST00000376230 TNNQ9UQP3 1299 aa12.93□□□□□ -0.34
ZNF550-203ENST00000376230 DMRT2Q9Y5R5 561 aa12.92□□□□□ -0.34
ZNF550-203ENST00000376230 HSP90AA1P07900 732 aaKnown RBP12.92□□□□□ -0.34
ZNF550-203ENST00000376230 PDE3BQ13370 1112 aa12.92□□□□□ -0.34
ZNF550-203ENST00000376230 IDI1Q13907 227 aa12.92□□□□□ -0.34
ZNF550-203ENST00000376230 TXNDC2Q86VQ3 553 aa12.92□□□□□ -0.34
ZNF550-203ENST00000376230 DDRGK1Q96HY6 314 aa12.91□□□□□ -0.34
ZNF550-203ENST00000376230 VGFO15240 615 aaPredicted RBP12.91□□□□□ -0.34
ZNF550-203ENST00000376230 EIF3AQ14152 1382 aaKnown RBP12.91□□□□□ -0.34
ZNF550-203ENST00000376230 UPF2Q9HAU5 1272 aaKnown RBP12.9□□□□□ -0.34
ZNF550-203ENST00000376230 CABP1Q9NZU7 370 aa12.9□□□□□ -0.34
ZNF550-203ENST00000376230 ERCC6L2Q5T890 1561 aa12.9□□□□□ -0.34
ZNF550-203ENST00000376230 NECTIN2Q92692 538 aa12.9□□□□□ -0.34
ZNF550-203ENST00000376230 CARD14Q9BXL6 1004 aa12.9□□□□□ -0.34
ZNF550-203ENST00000376230 LRRIQ1Q96JM4 1722 aa12.9□□□□□ -0.34
ZNF550-203ENST00000376230 NFKBIBQ15653 356 aa12.9□□□□□ -0.34
ZNF550-203ENST00000376230 HDGFL2Q7Z4V5 671 aaPredicted RBP12.9□□□□□ -0.34
ZNF550-203ENST00000376230 NUP160Q12769 1436 aa12.9□□□□□ -0.34
ZNF550-203ENST00000376230 FOXD4L1Q9NU39 408 aa12.89□□□□□ -0.35
ZNF550-203ENST00000376230 SPATA31E1Q6ZUB1 1445 aa12.88□□□□□ -0.35
ZNF550-203ENST00000376230 GSE1Q14687 1217 aa12.88□□□□□ -0.35
ZNF550-203ENST00000376230 CGNL1Q0VF96 1302 aa12.88□□□□□ -0.35
ZNF550-203ENST00000376230 EVC2Q86UK5 1308 aa12.88□□□□□ -0.35
ZNF550-203ENST00000376230 FAM135AQ9P2D6 1515 aa12.88□□□□□ -0.35
ZNF550-203ENST00000376230 RIPK4P57078 832 aa12.87□□□□□ -0.35
ZNF550-203ENST00000376230 AMER1Q5JTC6 1135 aaPredicted RBP12.87□□□□□ -0.35
ZNF550-203ENST00000376230 SLC26A8Q96RN1 970 aa12.87□□□□□ -0.35
ZNF550-203ENST00000376230 CFAP65Q6ZU64 1925 aaKnown RBP12.87□□□□□ -0.35
ZNF550-203ENST00000376230 DNMT1P26358 1616 aaKnown RBP12.87□□□□□ -0.35
ZNF550-203ENST00000376230 NCKAP5LQ9HCH0 1330 aa12.87□□□□□ -0.35
ZNF550-203ENST00000376230 MFAP1P55081 439 aaKnown RBP12.87□□□□□ -0.35
ZNF550-203ENST00000376230 PRAG1Q86YV5 1406 aa12.87□□□□□ -0.35
ZNF550-203ENST00000376230 CEBPAP49715 358 aaPredicted RBP12.86□□□□□ -0.35
ZNF550-203ENST00000376230 FRAT2O75474 233 aaPredicted RBP12.86□□□□□ -0.35
ZNF550-203ENST00000376230 C1orf115Q9H7X2 142 aa12.86□□□□□ -0.35
ZNF550-203ENST00000376230 RRS1Q15050 365 aaKnown RBP12.86□□□□□ -0.35
ZNF550-203ENST00000376230 PMFBP1Q8TBY8 1022 aa12.85□□□□□ -0.35
ZNF550-203ENST00000376230 TERF2IPQ9NYB0 399 aa12.85□□□□□ -0.35
ZNF550-203ENST00000376230 ADGRL1O94910 1474 aa12.85□□□□□ -0.35
ZNF550-203ENST00000376230 E9PSI1 815 aa12.85□□□□□ -0.35
ZNF550-203ENST00000376230 GZF1Q9H116 711 aaPredicted RBP12.85□□□□□ -0.35
ZNF550-203ENST00000376230 NOS1P29475 1434 aa12.85□□□□□ -0.35
ZNF550-203ENST00000376230 FANCAO15360 1455 aa12.85□□□□□ -0.35
ZNF550-203ENST00000376230 EXOSC9Q06265 439 aaKnown RBP12.85□□□□□ -0.35
ZNF550-203ENST00000376230 DUSP27Q5VZP5 1158 aa12.84□□□□□ -0.35
ZNF550-203ENST00000376230 KDM5BQ9UGL1 1544 aa12.84□□□□□ -0.35
ZNF550-203ENST00000376230 NSD3Q9BZ95 1437 aa12.84□□□□□ -0.35
ZNF550-203ENST00000376230 A2MP01023 1474 aa12.83□□□□□ -0.35
ZNF550-203ENST00000376230 DCTN1Q14203 1278 aa12.83□□□□□ -0.36
ZNF550-203ENST00000376230 ZRANB1Q9UGI0 708 aa12.83□□□□□ -0.36
ZNF550-203ENST00000376230 PLEKHH1Q9ULM0 1364 aa12.83□□□□□ -0.36
ZNF550-203ENST00000376230 A0A0G2JS52 829 aa12.83□□□□□ -0.36
ZNF550-203ENST00000376230 SLC4A10Q6U841 1118 aa12.83□□□□□ -0.36
ZNF550-203ENST00000376230 MBD5Q9P267 1494 aa12.83□□□□□ -0.36
ZNF550-203ENST00000376230 WWC1Q8IX03 1113 aa12.83□□□□□ -0.36
ZNF550-203ENST00000376230 CDK19Q9BWU1 502 aa12.83□□□□□ -0.36
ZNF550-203ENST00000376230 CD109Q6YHK3 1445 aa12.82□□□□□ -0.36
ZNF550-203ENST00000376230 RUNDC1Q96C34 613 aa12.82□□□□□ -0.36
ZNF550-203ENST00000376230 PLCH2O75038 1416 aa12.82□□□□□ -0.36
ZNF550-203ENST00000376230 USP35Q9P2H5 1018 aa12.82□□□□□ -0.36
ZNF550-203ENST00000376230 RALGAPBQ86X10 1494 aa12.81□□□□□ -0.36
ZNF550-203ENST00000376230 MS4A1P11836 297 aa12.81□□□□□ -0.36
ZNF550-203ENST00000376230 PRKAR2BP31323 418 aa12.81□□□□□ -0.36
ZNF550-203ENST00000376230 SLFN5Q08AF3 891 aa12.81□□□□□ -0.36
ZNF550-203ENST00000376230 MYH16Q9H6N6 1097 aa12.8□□□□□ -0.36
ZNF550-203ENST00000376230 DIAPH1O60610 1272 aaKnown RBP12.8□□□□□ -0.36
ZNF550-203ENST00000376230 NGDNQ8NEJ9 315 aaKnown RBP12.8□□□□□ -0.36
ZNF550-203ENST00000376230 LNPKQ9C0E8 428 aa12.8□□□□□ -0.36
ZNF550-203ENST00000376230 ABCC10Q5T3U5 1492 aa12.79□□□□□ -0.36
ZNF550-203ENST00000376230 CENPQQ7L2Z9 268 aaPredicted RBP12.79□□□□□ -0.36
ZNF550-203ENST00000376230 ASXL2Q76L83 1435 aa12.79□□□□□ -0.36
ZNF550-203ENST00000376230 IGHDP01880 384 aa12.79□□□□□ -0.36
ZNF550-203ENST00000376230 RNF123Q5XPI4 1314 aa12.79□□□□□ -0.36
ZNF550-203ENST00000376230 FAM161AQ3B820 660 aa12.78□□□□□ -0.36
ZNF550-203ENST00000376230 MIS18AQ9NYP9 233 aa12.78□□□□□ -0.36
ZNF550-203ENST00000376230 EMILIN1Q9Y6C2 1016 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms