RNA–Protein interactions for RNA: ENST00000375001.7

COL15A1-201, Transcript of collagen type XV alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL15A1, Length 5,496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-201ENST00000375001 NASPP49321 788 aaPredicted RBP24.17■■□□□ 1.46
COL15A1-201ENST00000375001 RUFY1Q96T51 708 aa24.17■■□□□ 1.46
COL15A1-201ENST00000375001 NUTM2DQ5VT03 806 aaPredicted RBP24.17■■□□□ 1.46
COL15A1-201ENST00000375001 BICD2Q8TD16 824 aa24.17■■□□□ 1.46
COL15A1-201ENST00000375001 H0YHG0 523 aa24.16■■□□□ 1.46
COL15A1-201ENST00000375001 E9PSI1 815 aa24.16■■□□□ 1.46
COL15A1-201ENST00000375001 APAF1O14727 1248 aa24.15■■□□□ 1.46
COL15A1-201ENST00000375001 PCMTD1Q96MG8 357 aaPredicted RBP24.15■■□□□ 1.46
COL15A1-201ENST00000375001 ACBD3Q9H3P7 528 aa24.15■■□□□ 1.46
COL15A1-201ENST00000375001 AK7Q96M32 723 aa24.15■■□□□ 1.46
COL15A1-201ENST00000375001 CWC15Q9P013 229 aaKnown RBP24.15■■□□□ 1.46
COL15A1-201ENST00000375001 CCDC39Q9UFE4 941 aa24.14■■□□□ 1.46
COL15A1-201ENST00000375001 WWC1Q8IX03 1113 aa24.14■■□□□ 1.46
COL15A1-201ENST00000375001 TRAK1Q9UPV9 953 aa24.13■■□□□ 1.45
COL15A1-201ENST00000375001 FBXW7Q969H0 707 aa24.13■■□□□ 1.45
COL15A1-201ENST00000375001 FBXO3Q9UK99 471 aa24.13■■□□□ 1.45
COL15A1-201ENST00000375001 CHMP4AQ9BY43 222 aa24.13■■□□□ 1.45
COL15A1-201ENST00000375001 TERF2IPQ9NYB0 399 aa24.13■■□□□ 1.45
COL15A1-201ENST00000375001 CGNL1Q0VF96 1302 aa24.13■■□□□ 1.45
COL15A1-201ENST00000375001 HDGFP51858 240 aaKnown RBP24.12■■□□□ 1.45
COL15A1-201ENST00000375001 CCDC7Q96M83 1385 aa24.12■■□□□ 1.45
COL15A1-201ENST00000375001 KIF7Q2M1P5 1343 aa24.12■■□□□ 1.45
COL15A1-201ENST00000375001 RNF214Q8ND24 703 aa24.11■■□□□ 1.45
COL15A1-201ENST00000375001 ELL2O00472 640 aaPredicted RBP24.11■■□□□ 1.45
COL15A1-201ENST00000375001 CCDC144AA2RUR9 1427 aa24.11■■□□□ 1.45
COL15A1-201ENST00000375001 SASS6Q6UVJ0 657 aa24.11■■□□□ 1.45
COL15A1-201ENST00000375001 ZKSCAN2Q63HK3 967 aa24.1■■□□□ 1.45
COL15A1-201ENST00000375001 REC8O95072 547 aa24.1■■□□□ 1.45
COL15A1-201ENST00000375001 VPS53Q5VIR6 699 aa24.1■■□□□ 1.45
COL15A1-201ENST00000375001 RDXP35241 583 aaKnown RBP24.09■■□□□ 1.45
COL15A1-201ENST00000375001 NUCB2P80303 420 aa24.09■■□□□ 1.45
COL15A1-201ENST00000375001 CDR1P51861 262 aa24.08■■□□□ 1.45
COL15A1-201ENST00000375001 CCDC9Q9Y3X0 531 aaKnown RBP24.08■■□□□ 1.45
COL15A1-201ENST00000375001 VPS37CA5D8V6 355 aaPredicted RBP24.07■■□□□ 1.44
COL15A1-201ENST00000375001 ANKRD20A12PQ8NF67 263 aa24.07■■□□□ 1.44
COL15A1-201ENST00000375001 CHMP4CQ96CF2 233 aa24.07■■□□□ 1.44
COL15A1-201ENST00000375001 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.06■■□□□ 1.44
COL15A1-201ENST00000375001 CCDC191Q8NCU4 936 aa24.06■■□□□ 1.44
COL15A1-201ENST00000375001 WASHC2AQ641Q2 1341 aa24.06■■□□□ 1.44
COL15A1-201ENST00000375001 PAK3O75914 559 aaPredicted RBP24.05■■□□□ 1.44
COL15A1-201ENST00000375001 RSPH4AQ5TD94 716 aa24.05■■□□□ 1.44
COL15A1-201ENST00000375001 CNTLNQ9NXG0 1405 aa24.05■■□□□ 1.44
COL15A1-201ENST00000375001 TRAK2O60296 914 aa24.04■■□□□ 1.44
COL15A1-201ENST00000375001 AKAP17AQ02040 695 aaKnown RBP24.04■■□□□ 1.44
COL15A1-201ENST00000375001 PDS5BQ9NTI5 1447 aa24.03■■□□□ 1.44
COL15A1-201ENST00000375001 CADPSQ9ULU8 1353 aa24.03■■□□□ 1.44
COL15A1-201ENST00000375001 LMOD3Q0VAK6 560 aa24.03■■□□□ 1.44
COL15A1-201ENST00000375001 ZKSCAN1P17029 563 aaPredicted RBP24.02■■□□□ 1.44
COL15A1-201ENST00000375001 C22orf23Q9BZE7 217 aa24.02■■□□□ 1.44
COL15A1-201ENST00000375001 ANO2Q9NQ90 1003 aa24.02■■□□□ 1.44
COL15A1-201ENST00000375001 FRAT2O75474 233 aaPredicted RBP24.01■■□□□ 1.43
COL15A1-201ENST00000375001 HSP90AB3PQ58FF7 597 aa24■■□□□ 1.43
COL15A1-201ENST00000375001 SMC3Q9UQE7 1217 aa24■■□□□ 1.43
COL15A1-201ENST00000375001 CSB-PGBD3P0DP91 1061 aa24■■□□□ 1.43
COL15A1-201ENST00000375001 KIF21BO75037 1637 aa23.99■■□□□ 1.43
COL15A1-201ENST00000375001 NAP1L1P55209 391 aaKnown RBP23.99■■□□□ 1.43
COL15A1-201ENST00000375001 CPLX2Q6PUV4 134 aaKnown RBP23.99■■□□□ 1.43
COL15A1-201ENST00000375001 PLCD4Q9BRC7 762 aa23.99■■□□□ 1.43
COL15A1-201ENST00000375001 HMGN5P82970 282 aaKnown RBP23.98■■□□□ 1.43
COL15A1-201ENST00000375001 TRIM29Q14134 588 aa23.98■■□□□ 1.43
COL15A1-201ENST00000375001 ATAD2BQ9ULI0 1458 aa23.97■■□□□ 1.43
COL15A1-201ENST00000375001 CAVIN1Q6NZI2 390 aaKnown RBP23.97■■□□□ 1.43
COL15A1-201ENST00000375001 TSPYL1Q9H0U9 437 aa23.97■■□□□ 1.43
COL15A1-201ENST00000375001 SMARCA4P51532 1647 aa23.97■■□□□ 1.43
COL15A1-201ENST00000375001 LEKR1Q6ZMV7 388 aa23.97■■□□□ 1.43
COL15A1-201ENST00000375001 CCDC73Q6ZRK6 1079 aa23.97■■□□□ 1.43
COL15A1-201ENST00000375001 SYNE3Q6ZMZ3 975 aa23.97■■□□□ 1.43
COL15A1-201ENST00000375001 RUFY2Q8WXA3 655 aa23.97■■□□□ 1.43
COL15A1-201ENST00000375001 MAPK8IP2Q13387 824 aaPredicted RBP23.97■■□□□ 1.43
COL15A1-201ENST00000375001 DCTN1Q14203 1278 aa23.97■■□□□ 1.43
COL15A1-201ENST00000375001 UACAQ9BZF9 1416 aa23.96■■□□□ 1.43
COL15A1-201ENST00000375001 HOOK1Q9UJC3 728 aaKnown RBP23.96■■□□□ 1.43
COL15A1-201ENST00000375001 CPLX1O14810 134 aa23.96■■□□□ 1.43
COL15A1-201ENST00000375001 SKIDA1Q1XH10 827 aa23.96■■□□□ 1.43
COL15A1-201ENST00000375001 FGD6Q6ZV73 1430 aa23.96■■□□□ 1.43
COL15A1-201ENST00000375001 ERCC4Q92889 916 aaPredicted RBP23.95■■□□□ 1.42
COL15A1-201ENST00000375001 DDX19BQ9UMR2 479 aa23.94■■□□□ 1.42
COL15A1-201ENST00000375001 PDILTQ8N807 584 aa23.94■■□□□ 1.42
COL15A1-201ENST00000375001 DZIP1LQ8IYY4 767 aaKnown RBP23.94■■□□□ 1.42
COL15A1-201ENST00000375001 CCDC47Q96A33 483 aaKnown RBP23.94■■□□□ 1.42
COL15A1-201ENST00000375001 TRIM5Q9C035 493 aa23.94■■□□□ 1.42
COL15A1-201ENST00000375001 CCDC173Q0VFZ6 552 aa23.93■■□□□ 1.42
COL15A1-201ENST00000375001 FOSBP53539 338 aa23.93■■□□□ 1.42
COL15A1-201ENST00000375001 CDCA7LQ96GN5 454 aa23.93■■□□□ 1.42
COL15A1-201ENST00000375001 WASHC2CQ9Y4E1 1318 aa23.93■■□□□ 1.42
COL15A1-201ENST00000375001 JPH4Q96JJ6 628 aa23.92■■□□□ 1.42
COL15A1-201ENST00000375001 TTLL5Q6EMB2 1281 aa23.92■■□□□ 1.42
COL15A1-201ENST00000375001 CAGE1Q8TC20 777 aa23.91■■□□□ 1.42
COL15A1-201ENST00000375001 RRP9O43818 475 aaKnown RBP23.91■■□□□ 1.42
COL15A1-201ENST00000375001 PANK1Q8TE04 598 aa23.9■■□□□ 1.42
COL15A1-201ENST00000375001 NUTM2FA1L443 756 aa23.9■■□□□ 1.42
COL15A1-201ENST00000375001 ZNF644Q9H582 1327 aaPredicted RBP23.9■■□□□ 1.42
COL15A1-201ENST00000375001 INTS3Q68E01 1043 aaKnown RBP23.9■■□□□ 1.42
COL15A1-201ENST00000375001 LNPKQ9C0E8 428 aa23.9■■□□□ 1.42
COL15A1-201ENST00000375001 IGF1RP08069 1367 aa23.89■■□□□ 1.41
COL15A1-201ENST00000375001 AXDND1Q5T1B0 1012 aaPredicted RBP23.89■■□□□ 1.41
COL15A1-201ENST00000375001 LTV1Q96GA3 475 aaPredicted RBP23.88■■□□□ 1.41
COL15A1-201ENST00000375001 NAT10Q9H0A0 1025 aaKnown RBP23.87■■□□□ 1.41
COL15A1-201ENST00000375001 LRRC9Q6ZRR7 1453 aa23.87■■□□□ 1.41
COL15A1-201ENST00000375001 TSPY26PQ9H489 355 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms