RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 PLEKHH2Q8IVE3 1493 aa26.38■■□□□ 1.81
TMEFF1-201ENST00000374879 INSRP06213 1382 aa26.37■■□□□ 1.81
TMEFF1-201ENST00000374879 MCM4P33991 863 aa26.37■■□□□ 1.81
TMEFF1-201ENST00000374879 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.37■■□□□ 1.81
TMEFF1-201ENST00000374879 IGHDP01880 384 aa26.36■■□□□ 1.81
TMEFF1-201ENST00000374879 RSPH4AQ5TD94 716 aa26.36■■□□□ 1.81
TMEFF1-201ENST00000374879 MRE11P49959 708 aa26.35■■□□□ 1.81
TMEFF1-201ENST00000374879 NLRP1Q9C000 1473 aa26.34■■□□□ 1.81
TMEFF1-201ENST00000374879 TBC1D2Q9BYX2 928 aa26.34■■□□□ 1.81
TMEFF1-201ENST00000374879 PDCL3Q9H2J4 239 aa26.34■■□□□ 1.81
TMEFF1-201ENST00000374879 MYH16Q9H6N6 1097 aa26.34■■□□□ 1.81
TMEFF1-201ENST00000374879 SPRYD3Q8NCJ5 442 aa26.33■■□□□ 1.81
TMEFF1-201ENST00000374879 ADAMTS8Q9UP79 889 aa26.33■■□□□ 1.8
TMEFF1-201ENST00000374879 PLEKHH1Q9ULM0 1364 aa26.32■■□□□ 1.8
TMEFF1-201ENST00000374879 SYCP2Q9BX26 1530 aa26.31■■□□□ 1.8
TMEFF1-201ENST00000374879 TRAK2O60296 914 aa26.31■■□□□ 1.8
TMEFF1-201ENST00000374879 CCDC144AA2RUR9 1427 aa26.31■■□□□ 1.8
TMEFF1-201ENST00000374879 TPM2P07951 284 aa26.3■■□□□ 1.8
TMEFF1-201ENST00000374879 GRPEL1Q9HAV7 217 aa26.3■■□□□ 1.8
TMEFF1-201ENST00000374879 ARHGAP5Q13017 1502 aa26.29■■□□□ 1.8
TMEFF1-201ENST00000374879 CENPJQ9HC77 1338 aaPredicted RBP26.29■■□□□ 1.8
TMEFF1-201ENST00000374879 TTC37Q6PGP7 1564 aa26.28■■□□□ 1.8
TMEFF1-201ENST00000374879 RGL3Q3MIN7 710 aa26.28■■□□□ 1.8
TMEFF1-201ENST00000374879 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.28■■□□□ 1.8
TMEFF1-201ENST00000374879 EIF3AQ14152 1382 aaKnown RBP26.27■■□□□ 1.8
TMEFF1-201ENST00000374879 GOLGA2Q08379 1002 aa26.26■■□□□ 1.79
TMEFF1-201ENST00000374879 PRAG1Q86YV5 1406 aa26.26■■□□□ 1.79
TMEFF1-201ENST00000374879 CHD1O14646 1710 aa26.25■■□□□ 1.79
TMEFF1-201ENST00000374879 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.24■■□□□ 1.79
TMEFF1-201ENST00000374879 TBC1D32Q96NH3 1257 aa26.24■■□□□ 1.79
TMEFF1-201ENST00000374879 PRDM4Q9UKN5 801 aa26.24■■□□□ 1.79
TMEFF1-201ENST00000374879 MAPK8IP3Q9UPT6 1336 aa26.23■■□□□ 1.79
TMEFF1-201ENST00000374879 TRPM1Q7Z4N2 1603 aa26.23■■□□□ 1.79
TMEFF1-201ENST00000374879 CALD1Q05682 793 aaKnown RBP26.23■■□□□ 1.79
TMEFF1-201ENST00000374879 MAST1Q9Y2H9 1570 aa26.22■■□□□ 1.79
TMEFF1-201ENST00000374879 ZNF521Q96K83 1311 aa26.22■■□□□ 1.79
TMEFF1-201ENST00000374879 BCAR3O75815 825 aa26.22■■□□□ 1.79
TMEFF1-201ENST00000374879 TRIM44Q96DX7 344 aaPredicted RBP26.22■■□□□ 1.79
TMEFF1-201ENST00000374879 UNC13BO14795 1591 aa26.22■■□□□ 1.79
TMEFF1-201ENST00000374879 PLA2R1Q13018 1463 aa26.22■■□□□ 1.79
TMEFF1-201ENST00000374879 NBPF1Q3BBV0 1214 aa26.21■■□□□ 1.79
TMEFF1-201ENST00000374879 UPF2Q9HAU5 1272 aaKnown RBP26.2■■□□□ 1.79
TMEFF1-201ENST00000374879 SLFN5Q08AF3 891 aa26.19■■□□□ 1.78
TMEFF1-201ENST00000374879 KIAA1211Q6ZU35 1233 aa26.18■■□□□ 1.78
TMEFF1-201ENST00000374879 PANK3Q9H999 370 aa26.18■■□□□ 1.78
TMEFF1-201ENST00000374879 A2MP01023 1474 aa26.17■■□□□ 1.78
TMEFF1-201ENST00000374879 RBM10P98175 930 aaKnown RBP26.17■■□□□ 1.78
TMEFF1-201ENST00000374879 CHMP5Q9NZZ3 219 aa26.17■■□□□ 1.78
TMEFF1-201ENST00000374879 SHROOM2Q13796 1616 aa26.16■■□□□ 1.78
TMEFF1-201ENST00000374879 MYO5CQ9NQX4 1742 aa26.15■■□□□ 1.78
TMEFF1-201ENST00000374879 PLXNC1O60486 1568 aa26.15■■□□□ 1.78
TMEFF1-201ENST00000374879 ABCC2Q92887 1545 aa26.14■■□□□ 1.78
TMEFF1-201ENST00000374879 SPINK5Q9NQ38 1064 aaPredicted RBP26.14■■□□□ 1.77
TMEFF1-201ENST00000374879 GPRASP1Q5JY77 1395 aa26.14■■□□□ 1.77
TMEFF1-201ENST00000374879 ERCC6L2Q5T890 1561 aa26.14■■□□□ 1.77
TMEFF1-201ENST00000374879 IQGAP3Q86VI3 1631 aa26.14■■□□□ 1.77
TMEFF1-201ENST00000374879 WDR43Q15061 677 aaKnown RBP eCLIP26.13■■□□□ 1.77
TMEFF1-201ENST00000374879 A0A0U1RQG5 324 aaPredicted RBP26.12■■□□□ 1.77
TMEFF1-201ENST00000374879 GAS2L3Q86XJ1 694 aa26.12■■□□□ 1.77
TMEFF1-201ENST00000374879 ISY1Q9ULR0 285 aaKnown RBP26.12■■□□□ 1.77
TMEFF1-201ENST00000374879 TRMT2AQ8IZ69 625 aaKnown RBP26.11■■□□□ 1.77
TMEFF1-201ENST00000374879 CLUAP1Q96AJ1 413 aa26.11■■□□□ 1.77
TMEFF1-201ENST00000374879 DUOX2Q9NRD8 1548 aa26.1■■□□□ 1.77
TMEFF1-201ENST00000374879 CGNL1Q0VF96 1302 aa26.08■■□□□ 1.76
TMEFF1-201ENST00000374879 COG6Q9Y2V7 657 aa26.07■■□□□ 1.76
TMEFF1-201ENST00000374879 COL17A1Q9UMD9 1497 aaPredicted RBP26.07■■□□□ 1.76
TMEFF1-201ENST00000374879 PRDM15P57071 1507 aaPredicted RBP26.07■■□□□ 1.76
TMEFF1-201ENST00000374879 DISP3Q9P2K9 1392 aa26.07■■□□□ 1.76
TMEFF1-201ENST00000374879 DDX11L8A8MPP1 907 aa26.07■■□□□ 1.76
TMEFF1-201ENST00000374879 TESK2Q96S53 571 aa26.07■■□□□ 1.76
TMEFF1-201ENST00000374879 RIPK4P57078 832 aa26.06■■□□□ 1.76
TMEFF1-201ENST00000374879 PANK1Q8TE04 598 aa26.06■■□□□ 1.76
TMEFF1-201ENST00000374879 LAMC1P11047 1609 aa26.06■■□□□ 1.76
TMEFF1-201ENST00000374879 ERBINQ96RT1 1412 aa26.05■■□□□ 1.76
TMEFF1-201ENST00000374879 NKTRP30414 1462 aaKnown RBP26.05■■□□□ 1.76
TMEFF1-201ENST00000374879 MAGI2Q86UL8 1455 aa26.04■■□□□ 1.76
TMEFF1-201ENST00000374879 PLCH2O75038 1416 aa26.04■■□□□ 1.76
TMEFF1-201ENST00000374879 ATP10AO60312 1499 aa26.04■■□□□ 1.76
TMEFF1-201ENST00000374879 EIF2AK4Q9P2K8 1649 aaKnown RBP26.03■■□□□ 1.76
TMEFF1-201ENST00000374879 CCDC146Q8IYE0 955 aa26.03■■□□□ 1.76
TMEFF1-201ENST00000374879 PPP2R1AP30153 589 aa26.02■■□□□ 1.76
TMEFF1-201ENST00000374879 PDE3AQ14432 1141 aa26.02■■□□□ 1.76
TMEFF1-201ENST00000374879 EFCAB2Q5VUJ9 269 aa26.02■■□□□ 1.76
TMEFF1-201ENST00000374879 OFD1O75665 1012 aa26.01■■□□□ 1.76
TMEFF1-201ENST00000374879 AAMPQ13685 434 aa26.01■■□□□ 1.76
TMEFF1-201ENST00000374879 ZNF692Q9BU19 519 aaPredicted RBP26.01■■□□□ 1.76
TMEFF1-201ENST00000374879 PDZRN3Q9UPQ7 1066 aa26■■□□□ 1.75
TMEFF1-201ENST00000374879 TMF1P82094 1093 aa25.99■■□□□ 1.75
TMEFF1-201ENST00000374879 FAM13BQ9NYF5 915 aa25.99■■□□□ 1.75
TMEFF1-201ENST00000374879 C22orf23Q9BZE7 217 aa25.98■■□□□ 1.75
TMEFF1-201ENST00000374879 ZCCHC11Q5TAX3 1644 aaKnown RBP25.97■■□□□ 1.75
TMEFF1-201ENST00000374879 CANXP27824 592 aaKnown RBP25.97■■□□□ 1.75
TMEFF1-201ENST00000374879 ZSCAN30Q86W11 494 aa25.97■■□□□ 1.75
TMEFF1-201ENST00000374879 TRAPPC8Q9Y2L5 1435 aa25.97■■□□□ 1.75
TMEFF1-201ENST00000374879 CLASP1Q7Z460 1538 aa25.96■■□□□ 1.75
TMEFF1-201ENST00000374879 ABCC1P33527 1531 aa25.96■■□□□ 1.75
TMEFF1-201ENST00000374879 APAF1O14727 1248 aa25.96■■□□□ 1.75
TMEFF1-201ENST00000374879 PCDHB15Q9Y5E8 787 aa25.96■■□□□ 1.75
TMEFF1-201ENST00000374879 DMRT2Q9Y5R5 561 aa25.95■■□□□ 1.74
TMEFF1-201ENST00000374879 RTEL1-TNFRSF6BF6WH68 1400 aa25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms