RNA–Protein interactions for RNA: ENST00000374733.1

ABCA1-201, Transcript of ATP binding cassette subfamily A member 1, humanhuman

TSL 2 BASIC

Gene ABCA1, Length 923 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-201ENST00000374733 MBD5Q9P267 1494 aa17.56■□□□□ 0.4
ABCA1-201ENST00000374733 ZNF644Q9H582 1327 aaPredicted RBP17.56■□□□□ 0.4
ABCA1-201ENST00000374733 TXNDC2Q86VQ3 553 aa17.56■□□□□ 0.4
ABCA1-201ENST00000374733 REM2Q8IYK8 340 aaPredicted RBP17.56■□□□□ 0.4
ABCA1-201ENST00000374733 TIAM1Q13009 1591 aa17.56■□□□□ 0.4
ABCA1-201ENST00000374733 SLIT1O75093 1534 aa17.56■□□□□ 0.4
ABCA1-201ENST00000374733 ARHGAP23Q9P227 1491 aa17.56■□□□□ 0.4
ABCA1-201ENST00000374733 ABCC3O15438 1527 aa17.55■□□□□ 0.4
ABCA1-201ENST00000374733 SPATA31A6Q5VVP1 1343 aa17.54■□□□□ 0.4
ABCA1-201ENST00000374733 SHPRHQ149N8 1683 aa17.53■□□□□ 0.4
ABCA1-201ENST00000374733 FYCO1Q9BQS8 1478 aa17.53■□□□□ 0.4
ABCA1-201ENST00000374733 PROSER2Q86WR7 435 aaPredicted RBP17.53■□□□□ 0.4
ABCA1-201ENST00000374733 SETBP1Q9Y6X0 1596 aa17.52■□□□□ 0.39
ABCA1-201ENST00000374733 MSH6P52701 1360 aa17.52■□□□□ 0.39
ABCA1-201ENST00000374733 PRDM15P57071 1507 aaPredicted RBP17.52■□□□□ 0.39
ABCA1-201ENST00000374733 RGS12O14924 1447 aa17.51■□□□□ 0.39
ABCA1-201ENST00000374733 CEP152O94986 1710 aa17.51■□□□□ 0.39
ABCA1-201ENST00000374733 FGD6Q6ZV73 1430 aa17.5■□□□□ 0.39
ABCA1-201ENST00000374733 SLAIN2Q9P270 581 aa17.5■□□□□ 0.39
ABCA1-201ENST00000374733 EID1Q9Y6B2 187 aa17.5■□□□□ 0.39
ABCA1-201ENST00000374733 KCNA6P17658 529 aa17.48■□□□□ 0.39
ABCA1-201ENST00000374733 SPDYE1Q8NFV5 336 aaPredicted RBP17.48■□□□□ 0.39
ABCA1-201ENST00000374733 NKTRP30414 1462 aaKnown RBP17.48■□□□□ 0.39
ABCA1-201ENST00000374733 CCDC141Q6ZP82 1450 aa17.48■□□□□ 0.39
ABCA1-201ENST00000374733 ZRANB1Q9UGI0 708 aa17.47■□□□□ 0.39
ABCA1-201ENST00000374733 NWD1Q149M9 1564 aa17.47■□□□□ 0.39
ABCA1-201ENST00000374733 KDM5AP29375 1690 aaKnown RBP17.46■□□□□ 0.39
ABCA1-201ENST00000374733 NUTM2BA6NNL0 878 aaPredicted RBP17.46■□□□□ 0.39
ABCA1-201ENST00000374733 NUTM2EB1AL46 878 aaPredicted RBP17.46■□□□□ 0.39
ABCA1-201ENST00000374733 NUTM2DQ5VT03 806 aaPredicted RBP17.46■□□□□ 0.39
ABCA1-201ENST00000374733 NUTM2AQ8IVF1 878 aaPredicted RBP17.46■□□□□ 0.39
ABCA1-201ENST00000374733 PIK3C2BO00750 1634 aa17.46■□□□□ 0.39
ABCA1-201ENST00000374733 STAG3Q9UJ98 1225 aa17.45■□□□□ 0.38
ABCA1-201ENST00000374733 AFF2P51816 1311 aa17.45■□□□□ 0.38
ABCA1-201ENST00000374733 SLC26A8Q96RN1 970 aa17.44■□□□□ 0.38
ABCA1-201ENST00000374733 AHDC1Q5TGY3 1603 aaPredicted RBP17.43■□□□□ 0.38
ABCA1-201ENST00000374733 MTUS2Q5JR59 1369 aa17.42■□□□□ 0.38
ABCA1-201ENST00000374733 TMEM2Q9UHN6 1383 aa17.42■□□□□ 0.38
ABCA1-201ENST00000374733 MROH1Q8NDA8 1641 aa17.42■□□□□ 0.38
ABCA1-201ENST00000374733 EP400Q96L91 3159 aa17.42■□□□□ 0.38
ABCA1-201ENST00000374733 CAMSAP2Q08AD1 1489 aa17.41■□□□□ 0.38
ABCA1-201ENST00000374733 TET3O43151 1660 aa17.41■□□□□ 0.38
ABCA1-201ENST00000374733 ATAD2Q6PL18 1390 aa17.4■□□□□ 0.38
ABCA1-201ENST00000374733 FBXO3Q9UK99 471 aa17.39■□□□□ 0.37
ABCA1-201ENST00000374733 DIP2AQ14689 1571 aa17.39■□□□□ 0.37
ABCA1-201ENST00000374733 EIF2AK4Q9P2K8 1649 aaKnown RBP17.39■□□□□ 0.37
ABCA1-201ENST00000374733 EFCAB6Q5THR3 1501 aa17.37■□□□□ 0.37
ABCA1-201ENST00000374733 RBM6P78332 1123 aaKnown RBP17.37■□□□□ 0.37
ABCA1-201ENST00000374733 QTRT2Q9H974 415 aaKnown RBP17.35■□□□□ 0.37
ABCA1-201ENST00000374733 CHD2O14647 1828 aaKnown RBP17.35■□□□□ 0.37
ABCA1-201ENST00000374733 EHBP1L1Q8N3D4 1523 aa17.34■□□□□ 0.37
ABCA1-201ENST00000374733 CLEC11AQ9Y240 323 aa17.34■□□□□ 0.37
ABCA1-201ENST00000374733 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.33■□□□□ 0.37
ABCA1-201ENST00000374733 PITPNM1O00562 1244 aa17.33■□□□□ 0.36
ABCA1-201ENST00000374733 C8orf37Q96NL8 207 aa17.33■□□□□ 0.36
ABCA1-201ENST00000374733 ARHGEF5Q12774 1597 aa17.32■□□□□ 0.36
ABCA1-201ENST00000374733 MAST1Q9Y2H9 1570 aa17.32■□□□□ 0.36
ABCA1-201ENST00000374733 C14orf37Q86TY3 774 aa17.32■□□□□ 0.36
ABCA1-201ENST00000374733 BCANQ96GW7 911 aa17.32■□□□□ 0.36
ABCA1-201ENST00000374733 TSPY4P0CV99 314 aa17.29■□□□□ 0.36
ABCA1-201ENST00000374733 TSPY10P0CW01 314 aa17.29■□□□□ 0.36
ABCA1-201ENST00000374733 RSPH4AQ5TD94 716 aa17.29■□□□□ 0.36
ABCA1-201ENST00000374733 LRP5O75197 1615 aa17.29■□□□□ 0.36
ABCA1-201ENST00000374733 ARHGAP31Q2M1Z3 1444 aa17.28■□□□□ 0.36
ABCA1-201ENST00000374733 CEP162Q5TB80 1403 aa17.28■□□□□ 0.36
ABCA1-201ENST00000374733 NGLY1Q96IV0 654 aa17.27■□□□□ 0.36
ABCA1-201ENST00000374733 ADGRB3O60242 1522 aa17.26■□□□□ 0.35
ABCA1-201ENST00000374733 ATF3P18847 181 aa17.25■□□□□ 0.35
ABCA1-201ENST00000374733 CADPS2Q86UW7 1296 aa17.25■□□□□ 0.35
ABCA1-201ENST00000374733 BRINP3Q76B58 766 aa17.24■□□□□ 0.35
ABCA1-201ENST00000374733 NHSL1Q5SYE7 1610 aa17.24■□□□□ 0.35
ABCA1-201ENST00000374733 NCOA3Q9Y6Q9 1424 aa17.23■□□□□ 0.35
ABCA1-201ENST00000374733 ASXL1Q8IXJ9 1541 aa17.23■□□□□ 0.35
ABCA1-201ENST00000374733 PRR29P0C7W0 189 aa17.23■□□□□ 0.35
ABCA1-201ENST00000374733 SETD5Q9C0A6 1442 aa17.22■□□□□ 0.35
ABCA1-201ENST00000374733 IDI1Q13907 227 aa17.22■□□□□ 0.35
ABCA1-201ENST00000374733 CHRDL2Q6WN34 429 aa17.22■□□□□ 0.35
ABCA1-201ENST00000374733 MYO5BQ9ULV0 1848 aa17.21■□□□□ 0.35
ABCA1-201ENST00000374733 ADAMTS2O95450 1211 aa17.19■□□□□ 0.34
ABCA1-201ENST00000374733 C19orf44Q9H6X5 657 aa17.19■□□□□ 0.34
ABCA1-201ENST00000374733 DUOX2Q9NRD8 1548 aa17.19■□□□□ 0.34
ABCA1-201ENST00000374733 PNPLA6Q8IY17 1366 aa17.18■□□□□ 0.34
ABCA1-201ENST00000374733 CCDC125Q86Z20 511 aa17.18■□□□□ 0.34
ABCA1-201ENST00000374733 PLEKHG1Q9ULL1 1385 aa17.17■□□□□ 0.34
ABCA1-201ENST00000374733 USP21Q9UK80 565 aa17.16■□□□□ 0.34
ABCA1-201ENST00000374733 PPP1R15AO75807 674 aaPredicted RBP17.15■□□□□ 0.34
ABCA1-201ENST00000374733 LRRC59Q96AG4 307 aaKnown RBP17.15■□□□□ 0.34
ABCA1-201ENST00000374733 TRPC5Q9UL62 973 aaPredicted RBP17.15■□□□□ 0.34
ABCA1-201ENST00000374733 GCC2Q8IWJ2 1684 aa17.13■□□□□ 0.33
ABCA1-201ENST00000374733 ZFYVE9O95405 1425 aa17.13■□□□□ 0.33
ABCA1-201ENST00000374733 DDX17Q92841 729 aaKnown RBP17.13■□□□□ 0.33
ABCA1-201ENST00000374733 ATRNO75882 1429 aa17.12■□□□□ 0.33
ABCA1-201ENST00000374733 RIMS2Q9UQ26 1411 aa17.11■□□□□ 0.33
ABCA1-201ENST00000374733 DEFB132Q7Z7B7 95 aa17.1■□□□□ 0.33
ABCA1-201ENST00000374733 KANK1Q14678 1352 aa17.1■□□□□ 0.33
ABCA1-201ENST00000374733 DCCP43146 1447 aa17.1■□□□□ 0.33
ABCA1-201ENST00000374733 MST1RQ04912 1400 aa17.1■□□□□ 0.33
ABCA1-201ENST00000374733 ERBINQ96RT1 1412 aa17.1■□□□□ 0.33
ABCA1-201ENST00000374733 TBX22Q9Y458 520 aa17.09■□□□□ 0.33
ABCA1-201ENST00000374733 KIF15Q9NS87 1388 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms