RNA–Protein interactions for RNA: ENST00000374512.7

PHF1-201, Transcript of PHD finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene PHF1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-201ENST00000374512 CLTCL1P53675 1640 aa23.77■■□□□ 1.4
PHF1-201ENST00000374512 ZBTB47Q9UFB7 747 aaPredicted RBP23.76■■□□□ 1.39
PHF1-201ENST00000374512 CFAP74Q9C0B2 1584 aa23.76■■□□□ 1.39
PHF1-201ENST00000374512 KIDINS220Q9ULH0 1771 aa23.75■■□□□ 1.39
PHF1-201ENST00000374512 CC2D1BQ5T0F9 858 aaKnown RBP23.75■■□□□ 1.39
PHF1-201ENST00000374512 ZNF518AQ6AHZ1 1483 aa23.75■■□□□ 1.39
PHF1-201ENST00000374512 KIF3BO15066 747 aa23.74■■□□□ 1.39
PHF1-201ENST00000374512 PAK3O75914 559 aaPredicted RBP23.74■■□□□ 1.39
PHF1-201ENST00000374512 CDCA8Q53HL2 280 aa23.74■■□□□ 1.39
PHF1-201ENST00000374512 MROH1Q8NDA8 1641 aa23.73■■□□□ 1.39
PHF1-201ENST00000374512 NEURL4Q96JN8 1562 aa23.71■■□□□ 1.39
PHF1-201ENST00000374512 CD109Q6YHK3 1445 aa23.71■■□□□ 1.39
PHF1-201ENST00000374512 CDCA7LQ96GN5 454 aa23.71■■□□□ 1.39
PHF1-201ENST00000374512 SALL2Q9Y467 1007 aaPredicted RBP23.71■■□□□ 1.39
PHF1-201ENST00000374512 SCAF11Q99590 1463 aaKnown RBP23.7■■□□□ 1.38
PHF1-201ENST00000374512 SYNMO15061 1565 aa23.7■■□□□ 1.38
PHF1-201ENST00000374512 KIAA1210Q9ULL0 1709 aa23.68■■□□□ 1.38
PHF1-201ENST00000374512 KNSTRNQ9Y448 316 aa23.67■■□□□ 1.38
PHF1-201ENST00000374512 NPC1L1Q9UHC9 1359 aa23.66■■□□□ 1.38
PHF1-201ENST00000374512 PDE4AP27815 886 aa23.66■■□□□ 1.38
PHF1-201ENST00000374512 DEKP35659 375 aaKnown RBP23.65■■□□□ 1.38
PHF1-201ENST00000374512 BACH2Q9BYV9 841 aa23.65■■□□□ 1.38
PHF1-201ENST00000374512 POGZQ7Z3K3 1410 aa23.65■■□□□ 1.38
PHF1-201ENST00000374512 SLC24A1O60721 1099 aa23.65■■□□□ 1.38
PHF1-201ENST00000374512 EIF3AQ14152 1382 aaKnown RBP23.64■■□□□ 1.37
PHF1-201ENST00000374512 EFCAB6Q5THR3 1501 aa23.64■■□□□ 1.37
PHF1-201ENST00000374512 MLH3Q9UHC1 1453 aa23.63■■□□□ 1.37
PHF1-201ENST00000374512 LMTK2Q8IWU2 1503 aa23.62■■□□□ 1.37
PHF1-201ENST00000374512 PIK3C2GO75747 1445 aa23.62■■□□□ 1.37
PHF1-201ENST00000374512 PPP2R1AP30153 589 aa23.62■■□□□ 1.37
PHF1-201ENST00000374512 ADAMTS8Q9UP79 889 aa23.62■■□□□ 1.37
PHF1-201ENST00000374512 ASXL1Q8IXJ9 1541 aa23.61■■□□□ 1.37
PHF1-201ENST00000374512 KIF1BO60333 1816 aa23.61■■□□□ 1.37
PHF1-201ENST00000374512 AMER1Q5JTC6 1135 aaPredicted RBP23.61■■□□□ 1.37
PHF1-201ENST00000374512 WDR43Q15061 677 aaKnown RBP eCLIP23.6■■□□□ 1.37
PHF1-201ENST00000374512 HECW2Q9P2P5 1572 aa23.6■■□□□ 1.37
PHF1-201ENST00000374512 MYOM2P54296 1465 aa23.6■■□□□ 1.37
PHF1-201ENST00000374512 MAP3K4Q9Y6R4 1608 aa23.59■■□□□ 1.37
PHF1-201ENST00000374512 PPRC1Q5VV67 1664 aaKnown RBP23.59■■□□□ 1.37
PHF1-201ENST00000374512 NBR1Q14596 966 aa23.57■■□□□ 1.36
PHF1-201ENST00000374512 RTL5Q5HYW3 569 aaPredicted RBP23.57■■□□□ 1.36
PHF1-201ENST00000374512 CRBNQ96SW2 442 aa23.57■■□□□ 1.36
PHF1-201ENST00000374512 NEO1Q92859 1461 aa23.57■■□□□ 1.36
PHF1-201ENST00000374512 ZNF521Q96K83 1311 aa23.57■■□□□ 1.36
PHF1-201ENST00000374512 MYOM1P52179 1685 aa23.56■■□□□ 1.36
PHF1-201ENST00000374512 KDM5AP29375 1690 aaKnown RBP23.56■■□□□ 1.36
PHF1-201ENST00000374512 IFT172Q9UG01 1749 aa23.55■■□□□ 1.36
PHF1-201ENST00000374512 PLIN1O60240 522 aa23.55■■□□□ 1.36
PHF1-201ENST00000374512 FRMPD1Q5SYB0 1578 aa23.55■■□□□ 1.36
PHF1-201ENST00000374512 UGGT1Q9NYU2 1555 aa23.55■■□□□ 1.36
PHF1-201ENST00000374512 ABCA6Q8N139 1617 aa23.55■■□□□ 1.36
PHF1-201ENST00000374512 DUSP27Q5VZP5 1158 aa23.54■■□□□ 1.36
PHF1-201ENST00000374512 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.54■■□□□ 1.36
PHF1-201ENST00000374512 GOLGA2Q08379 1002 aa23.53■■□□□ 1.36
PHF1-201ENST00000374512 PLEKHH1Q9ULM0 1364 aa23.52■■□□□ 1.36
PHF1-201ENST00000374512 NGEFQ8N5V2 710 aa23.52■■□□□ 1.36
PHF1-201ENST00000374512 CENPQQ7L2Z9 268 aaPredicted RBP23.51■■□□□ 1.35
PHF1-201ENST00000374512 USP35Q9P2H5 1018 aa23.51■■□□□ 1.35
PHF1-201ENST00000374512 MROH2AA6NES4 1674 aa23.5■■□□□ 1.35
PHF1-201ENST00000374512 KDM2BQ8NHM5 1336 aa23.5■■□□□ 1.35
PHF1-201ENST00000374512 DDRGK1Q96HY6 314 aa23.5■■□□□ 1.35
PHF1-201ENST00000374512 CFAP70Q5T0N1 1121 aa23.49■■□□□ 1.35
PHF1-201ENST00000374512 ADGRF5Q8IZF2 1346 aa23.48■■□□□ 1.35
PHF1-201ENST00000374512 NPM2Q86SE8 214 aaKnown RBP23.48■■□□□ 1.35
PHF1-201ENST00000374512 NRXN1Q9ULB1 1477 aa23.47■■□□□ 1.35
PHF1-201ENST00000374512 TRMT2AQ8IZ69 625 aaKnown RBP23.47■■□□□ 1.35
PHF1-201ENST00000374512 SLFN5Q08AF3 891 aa23.46■■□□□ 1.35
PHF1-201ENST00000374512 ADGRB3O60242 1522 aa23.45■■□□□ 1.34
PHF1-201ENST00000374512 NPATQ14207 1427 aa23.45■■□□□ 1.34
PHF1-201ENST00000374512 ERVK-7P63135 1459 aa23.45■■□□□ 1.34
PHF1-201ENST00000374512 MYO3AQ8NEV4 1616 aa23.45■■□□□ 1.34
PHF1-201ENST00000374512 PPM1GO15355 546 aaPredicted RBP23.44■■□□□ 1.34
PHF1-201ENST00000374512 GGT6Q6P531 493 aa23.44■■□□□ 1.34
PHF1-201ENST00000374512 C20orf194Q5TEA3 1177 aa23.43■■□□□ 1.34
PHF1-201ENST00000374512 ABCC3O15438 1527 aa23.43■■□□□ 1.34
PHF1-201ENST00000374512 RICTORQ6R327 1708 aa23.43■■□□□ 1.34
PHF1-201ENST00000374512 CFAP65Q6ZU64 1925 aaKnown RBP23.43■■□□□ 1.34
PHF1-201ENST00000374512 SBNO2Q9Y2G9 1366 aa23.42■■□□□ 1.34
PHF1-201ENST00000374512 DIP2CQ9Y2E4 1556 aa23.42■■□□□ 1.34
PHF1-201ENST00000374512 SETBP1Q9Y6X0 1596 aa23.42■■□□□ 1.34
PHF1-201ENST00000374512 RAPGEF3O95398 923 aa23.41■■□□□ 1.34
PHF1-201ENST00000374512 NKTRP30414 1462 aaKnown RBP23.4■■□□□ 1.34
PHF1-201ENST00000374512 GLI2P10070 1586 aa23.4■■□□□ 1.34
PHF1-201ENST00000374512 NOS1P29475 1434 aa23.4■■□□□ 1.34
PHF1-201ENST00000374512 CAMSAP1Q5T5Y3 1602 aa23.39■■□□□ 1.34
PHF1-201ENST00000374512 PPLO60437 1756 aa23.38■■□□□ 1.33
PHF1-201ENST00000374512 E9PSI1 815 aa23.37■■□□□ 1.33
PHF1-201ENST00000374512 CHGAP10645 457 aaKnown RBP23.35■■□□□ 1.33
PHF1-201ENST00000374512 FAM161AQ3B820 660 aa23.35■■□□□ 1.33
PHF1-201ENST00000374512 CYB5RLQ6IPT4 315 aa23.35■■□□□ 1.33
PHF1-201ENST00000374512 NINLQ9Y2I6 1382 aa23.34■■□□□ 1.33
PHF1-201ENST00000374512 CENPJQ9HC77 1338 aaPredicted RBP23.34■■□□□ 1.33
PHF1-201ENST00000374512 POLR3AO14802 1390 aaPredicted RBP23.33■■□□□ 1.33
PHF1-201ENST00000374512 ZC3H13Q5T200 1668 aaKnown RBP23.33■■□□□ 1.33
PHF1-201ENST00000374512 RPGRIP1LQ68CZ1 1315 aa23.32■■□□□ 1.32
PHF1-201ENST00000374512 SIGLEC1Q9BZZ2 1709 aa23.32■■□□□ 1.32
PHF1-201ENST00000374512 APAF1O14727 1248 aa23.32■■□□□ 1.32
PHF1-201ENST00000374512 NEFMP07197 916 aa23.31■■□□□ 1.32
PHF1-201ENST00000374512 CARD14Q9BXL6 1004 aa23.31■■□□□ 1.32
PHF1-201ENST00000374512 C14orf93Q9H972 538 aaKnown RBP23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms