RNA–Protein interactions for RNA: ENST00000374257.5

PTBP3-205, Transcript of polypyrimidine tract binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene PTBP3, Length 7,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP3-205ENST00000374257 SENP3-EIF4A1A0A087X0R7 540 aa10.73□□□□□ -0.69
PTBP3-205ENST00000374257 PCF11O94913 1555 aaKnown RBP10.72□□□□□ -0.69
PTBP3-205ENST00000374257 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.72□□□□□ -0.69
PTBP3-205ENST00000374257 NGLY1Q96IV0 654 aa10.72□□□□□ -0.69
PTBP3-205ENST00000374257 GPATCH8Q9UKJ3 1502 aaKnown RBP10.72□□□□□ -0.69
PTBP3-205ENST00000374257 MSH6P52701 1360 aa10.71□□□□□ -0.69
PTBP3-205ENST00000374257 RTEL1-TNFRSF6BF6WH68 1400 aa10.71□□□□□ -0.69
PTBP3-205ENST00000374257 UHRF1BP1LA0JNW5 1464 aa10.71□□□□□ -0.69
PTBP3-205ENST00000374257 PDE3BQ13370 1112 aa10.71□□□□□ -0.7
PTBP3-205ENST00000374257 ABCC5O15440 1437 aa10.71□□□□□ -0.7
PTBP3-205ENST00000374257 HMGB2P26583 209 aaKnown RBP10.7□□□□□ -0.7
PTBP3-205ENST00000374257 KLHL34Q8N239 644 aa10.7□□□□□ -0.7
PTBP3-205ENST00000374257 UHRF1BP1Q6BDS2 1440 aa10.7□□□□□ -0.7
PTBP3-205ENST00000374257 CDK19Q9BWU1 502 aa10.7□□□□□ -0.7
PTBP3-205ENST00000374257 TOM1L2Q6ZVM7 507 aa10.7□□□□□ -0.7
PTBP3-205ENST00000374257 HDAC5Q9UQL6 1122 aa10.7□□□□□ -0.7
PTBP3-205ENST00000374257 FRAT1Q92837 279 aaPredicted RBP10.7□□□□□ -0.7
PTBP3-205ENST00000374257 UPF2Q9HAU5 1272 aaKnown RBP10.7□□□□□ -0.7
PTBP3-205ENST00000374257 G3V3G9 751 aa10.69□□□□□ -0.7
PTBP3-205ENST00000374257 DCAF8Q5TAQ9 597 aa10.69□□□□□ -0.7
PTBP3-205ENST00000374257 LRPPRCP42704 1394 aaKnown RBP10.69□□□□□ -0.7
PTBP3-205ENST00000374257 THOC2Q8NI27 1593 aaKnown RBP10.69□□□□□ -0.7
PTBP3-205ENST00000374257 XPCQ01831 940 aaPredicted RBP10.69□□□□□ -0.7
PTBP3-205ENST00000374257 ADAMTS2O95450 1211 aa10.68□□□□□ -0.7
PTBP3-205ENST00000374257 PHF8Q9UPP1 1060 aa10.68□□□□□ -0.7
PTBP3-205ENST00000374257 CCDC61Q9Y6R9 512 aa10.68□□□□□ -0.7
PTBP3-205ENST00000374257 ZMYM3Q14202 1370 aa10.68□□□□□ -0.7
PTBP3-205ENST00000374257 DIAPH1O60610 1272 aaKnown RBP10.68□□□□□ -0.7
PTBP3-205ENST00000374257 NEO1Q92859 1461 aa10.68□□□□□ -0.7
PTBP3-205ENST00000374257 ATP10AO60312 1499 aa10.68□□□□□ -0.7
PTBP3-205ENST00000374257 NCOA1Q15788 1441 aa10.68□□□□□ -0.7
PTBP3-205ENST00000374257 TRAPPC8Q9Y2L5 1435 aa10.68□□□□□ -0.7
PTBP3-205ENST00000374257 KDM5BQ9UGL1 1544 aa10.67□□□□□ -0.7
PTBP3-205ENST00000374257 DISP1Q96F81 1524 aa10.67□□□□□ -0.7
PTBP3-205ENST00000374257 GGNBP2Q9H3C7 697 aa10.67□□□□□ -0.7
PTBP3-205ENST00000374257 ABCA5Q8WWZ7 1642 aa10.67□□□□□ -0.7
PTBP3-205ENST00000374257 CABP1Q9NZU7 370 aa10.67□□□□□ -0.7
PTBP3-205ENST00000374257 LMTK3Q96Q04 1460 aa10.67□□□□□ -0.7
PTBP3-205ENST00000374257 RBM33Q96EV2 1170 aaKnown RBP10.66□□□□□ -0.7
PTBP3-205ENST00000374257 FOXO3O43524 673 aa10.66□□□□□ -0.7
PTBP3-205ENST00000374257 MAP3K1Q13233 1512 aa10.66□□□□□ -0.7
PTBP3-205ENST00000374257 MIER1Q8N108 512 aa10.66□□□□□ -0.7
PTBP3-205ENST00000374257 IPO8O15397 1037 aaKnown RBP10.66□□□□□ -0.7
PTBP3-205ENST00000374257 TARBP1Q13395 1621 aaKnown RBP10.66□□□□□ -0.7
PTBP3-205ENST00000374257 NCKAP5LQ9HCH0 1330 aa10.66□□□□□ -0.7
PTBP3-205ENST00000374257 CCDC136Q96JN2 1154 aa10.66□□□□□ -0.7
PTBP3-205ENST00000374257 TATP17735 454 aaPredicted RBP10.66□□□□□ -0.7
PTBP3-205ENST00000374257 NUDT16Q96DE0 195 aaKnown RBP10.65□□□□□ -0.7
PTBP3-205ENST00000374257 TAF7LQ5H9L4 462 aa10.64□□□□□ -0.71
PTBP3-205ENST00000374257 KCNH5Q8NCM2 988 aa10.64□□□□□ -0.71
PTBP3-205ENST00000374257 ATAD2Q6PL18 1390 aa10.64□□□□□ -0.71
PTBP3-205ENST00000374257 ZC3H6P61129 1189 aaKnown RBP10.64□□□□□ -0.71
PTBP3-205ENST00000374257 WAPLQ7Z5K2 1190 aa10.64□□□□□ -0.71
PTBP3-205ENST00000374257 SMG6Q86US8 1419 aaKnown RBP10.64□□□□□ -0.71
PTBP3-205ENST00000374257 NBPF1Q3BBV0 1214 aa10.63□□□□□ -0.71
PTBP3-205ENST00000374257 WASHC2AQ641Q2 1341 aa10.63□□□□□ -0.71
PTBP3-205ENST00000374257 PLEKHO1Q53GL0 409 aaPredicted RBP10.63□□□□□ -0.71
PTBP3-205ENST00000374257 C19orf44Q9H6X5 657 aa10.63□□□□□ -0.71
PTBP3-205ENST00000374257 HSP90AA1P07900 732 aaKnown RBP10.63□□□□□ -0.71
PTBP3-205ENST00000374257 CHMP3Q9Y3E7 222 aa10.62□□□□□ -0.71
PTBP3-205ENST00000374257 PBRM1Q86U86 1689 aa10.61□□□□□ -0.71
PTBP3-205ENST00000374257 SYCP2Q9BX26 1530 aa10.61□□□□□ -0.71
PTBP3-205ENST00000374257 NAIPQ13075 1403 aa10.61□□□□□ -0.71
PTBP3-205ENST00000374257 NPHP3Q7Z494 1330 aa10.61□□□□□ -0.71
PTBP3-205ENST00000374257 KRT28Q7Z3Y7 464 aa10.6□□□□□ -0.71
PTBP3-205ENST00000374257 DDX54Q8TDD1 881 aaKnown RBP10.6□□□□□ -0.71
PTBP3-205ENST00000374257 SLC12A5Q9H2X9 1139 aa10.59□□□□□ -0.71
PTBP3-205ENST00000374257 FKBP8Q14318 412 aa10.59□□□□□ -0.71
PTBP3-205ENST00000374257 SPG7Q9UQ90 795 aa10.58□□□□□ -0.72
PTBP3-205ENST00000374257 TBX22Q9Y458 520 aa10.58□□□□□ -0.72
PTBP3-205ENST00000374257 NEXNQ0ZGT2 675 aa10.58□□□□□ -0.72
PTBP3-205ENST00000374257 DUOX2Q9NRD8 1548 aa10.58□□□□□ -0.72
PTBP3-205ENST00000374257 CCER2I3L3R5 266 aa10.58□□□□□ -0.72
PTBP3-205ENST00000374257 WASLO00401 505 aaPredicted RBP10.58□□□□□ -0.72
PTBP3-205ENST00000374257 GORABQ5T7V8 394 aa10.58□□□□□ -0.72
PTBP3-205ENST00000374257 RIMS2Q9UQ26 1411 aa10.58□□□□□ -0.72
PTBP3-205ENST00000374257 PTPN23Q9H3S7 1636 aa10.58□□□□□ -0.72
PTBP3-205ENST00000374257 MYBBP1AQ9BQG0 1328 aaKnown RBP10.58□□□□□ -0.72
PTBP3-205ENST00000374257 LRRC59Q96AG4 307 aaKnown RBP10.58□□□□□ -0.72
PTBP3-205ENST00000374257 ADGRF5Q8IZF2 1346 aa10.57□□□□□ -0.72
PTBP3-205ENST00000374257 CCDC146Q8IYE0 955 aa10.57□□□□□ -0.72
PTBP3-205ENST00000374257 RBM42Q9BTD8 480 aaKnown RBP10.57□□□□□ -0.72
PTBP3-205ENST00000374257 PPP1R1BQ9UD71 204 aaPredicted RBP10.57□□□□□ -0.72
PTBP3-205ENST00000374257 CASC1Q6TDU7 716 aa10.57□□□□□ -0.72
PTBP3-205ENST00000374257 GAS2L2Q8NHY3 880 aa10.57□□□□□ -0.72
PTBP3-205ENST00000374257 FRAT2O75474 233 aaPredicted RBP10.56□□□□□ -0.72
PTBP3-205ENST00000374257 NGEFQ8N5V2 710 aa10.56□□□□□ -0.72
PTBP3-205ENST00000374257 HSP90AB1P08238 724 aaKnown RBP10.56□□□□□ -0.72
PTBP3-205ENST00000374257 KCNA6P17658 529 aa10.56□□□□□ -0.72
PTBP3-205ENST00000374257 EIF5BO60841 1220 aaKnown RBP10.56□□□□□ -0.72
PTBP3-205ENST00000374257 C14orf93Q9H972 538 aaKnown RBP10.56□□□□□ -0.72
PTBP3-205ENST00000374257 NOS1P29475 1434 aa10.56□□□□□ -0.72
PTBP3-205ENST00000374257 EIF2S2P20042 333 aaKnown RBP10.56□□□□□ -0.72
PTBP3-205ENST00000374257 ZFYVE16Q7Z3T8 1539 aa10.56□□□□□ -0.72
PTBP3-205ENST00000374257 DDX58O95786 925 aaKnown RBP10.55□□□□□ -0.72
PTBP3-205ENST00000374257 SLC4A10Q6U841 1118 aa10.55□□□□□ -0.72
PTBP3-205ENST00000374257 RRP7AQ9Y3A4 280 aaKnown RBP10.55□□□□□ -0.72
PTBP3-205ENST00000374257 HMOX1P09601 288 aa10.54□□□□□ -0.72
PTBP3-205ENST00000374257 C8orf37Q96NL8 207 aa10.54□□□□□ -0.72
PTBP3-205ENST00000374257 SMC4Q9NTJ3 1288 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms