RNA–Protein interactions for RNA: ENST00000373991.3

SCAND1-202, Transcript of SCAN domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAND1, Length 1,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAND1-202ENST00000373991 LMTK3Q96Q04 1460 aa31.84■■■□□ 2.69
SCAND1-202ENST00000373991 HDGFP51858 240 aaKnown RBP31.83■■■□□ 2.69
SCAND1-202ENST00000373991 HSPA2P54652 639 aa31.82■■■□□ 2.68
SCAND1-202ENST00000373991 AEBP2Q6ZN18 517 aaPredicted RBP31.82■■■□□ 2.68
SCAND1-202ENST00000373991 NEXMIFQ5QGS0 1516 aa31.81■■■□□ 2.68
SCAND1-202ENST00000373991 VGFO15240 615 aaPredicted RBP31.81■■■□□ 2.68
SCAND1-202ENST00000373991 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.81■■■□□ 2.68
SCAND1-202ENST00000373991 TXNDC2Q86VQ3 553 aa31.8■■■□□ 2.68
SCAND1-202ENST00000373991 EID1Q9Y6B2 187 aa31.8■■■□□ 2.68
SCAND1-202ENST00000373991 ZFYVE9O95405 1425 aa31.8■■■□□ 2.68
SCAND1-202ENST00000373991 SLIT1O75093 1534 aa31.79■■■□□ 2.68
SCAND1-202ENST00000373991 ARHGAP23Q9P227 1491 aa31.79■■■□□ 2.68
SCAND1-202ENST00000373991 PPP1R15AO75807 674 aaPredicted RBP31.79■■■□□ 2.68
SCAND1-202ENST00000373991 LTKP29376 864 aa31.79■■■□□ 2.68
SCAND1-202ENST00000373991 STAC3Q96MF2 364 aa31.79■■■□□ 2.68
SCAND1-202ENST00000373991 ADGRF5Q8IZF2 1346 aa31.77■■■□□ 2.68
SCAND1-202ENST00000373991 ANKLE2Q86XL3 938 aa31.77■■■□□ 2.68
SCAND1-202ENST00000373991 PPLO60437 1756 aa31.76■■■□□ 2.67
SCAND1-202ENST00000373991 ZEB1P37275 1124 aaPredicted RBP31.75■■■□□ 2.67
SCAND1-202ENST00000373991 SENP3Q9H4L4 574 aaPredicted RBP31.75■■■□□ 2.67
SCAND1-202ENST00000373991 IFT172Q9UG01 1749 aa31.74■■■□□ 2.67
SCAND1-202ENST00000373991 MYOM2P54296 1465 aa31.72■■■□□ 2.67
SCAND1-202ENST00000373991 SCAF11Q99590 1463 aaKnown RBP31.7■■■□□ 2.67
SCAND1-202ENST00000373991 BCANQ96GW7 911 aa31.69■■■□□ 2.66
SCAND1-202ENST00000373991 NCKAP5LQ9HCH0 1330 aa31.69■■■□□ 2.66
SCAND1-202ENST00000373991 NBPF8Q3BBV2 869 aa31.68■■■□□ 2.66
SCAND1-202ENST00000373991 PRAG1Q86YV5 1406 aa31.66■■■□□ 2.66
SCAND1-202ENST00000373991 NRXN1Q9ULB1 1477 aa31.66■■■□□ 2.66
SCAND1-202ENST00000373991 PLEKHG1Q9ULL1 1385 aa31.64■■■□□ 2.66
SCAND1-202ENST00000373991 PIK3C2GO75747 1445 aa31.63■■■□□ 2.65
SCAND1-202ENST00000373991 CFAP70Q5T0N1 1121 aa31.6■■■□□ 2.65
SCAND1-202ENST00000373991 C14orf93Q9H972 538 aaKnown RBP31.58■■■□□ 2.65
SCAND1-202ENST00000373991 SLC26A8Q96RN1 970 aa31.57■■■□□ 2.64
SCAND1-202ENST00000373991 NPHP4O75161 1426 aaPredicted RBP31.57■■■□□ 2.64
SCAND1-202ENST00000373991 MED14O60244 1454 aa31.56■■■□□ 2.64
SCAND1-202ENST00000373991 POLR1AO95602 1720 aaPredicted RBP31.56■■■□□ 2.64
SCAND1-202ENST00000373991 SETBP1Q9Y6X0 1596 aa31.54■■■□□ 2.64
SCAND1-202ENST00000373991 NBPF1Q3BBV0 1214 aa31.53■■■□□ 2.64
SCAND1-202ENST00000373991 ADAMTS13Q76LX8 1427 aa31.52■■■□□ 2.64
SCAND1-202ENST00000373991 ALKQ9UM73 1620 aa31.51■■■□□ 2.63
SCAND1-202ENST00000373991 NRXN3Q9Y4C0 1643 aa31.51■■■□□ 2.63
SCAND1-202ENST00000373991 STRCQ7RTU9 1775 aa31.51■■■□□ 2.63
SCAND1-202ENST00000373991 IQGAP1P46940 1657 aa31.5■■■□□ 2.63
SCAND1-202ENST00000373991 TBX22Q9Y458 520 aa31.49■■■□□ 2.63
SCAND1-202ENST00000373991 TMEM132EQ6IEE7 984 aa31.49■■■□□ 2.63
SCAND1-202ENST00000373991 ROCK2O75116 1388 aaKnown RBP31.48■■■□□ 2.63
SCAND1-202ENST00000373991 TRPM1Q7Z4N2 1603 aa31.47■■■□□ 2.63
SCAND1-202ENST00000373991 RALGAPBQ86X10 1494 aa31.46■■■□□ 2.63
SCAND1-202ENST00000373991 METP08581 1390 aa31.45■■■□□ 2.62
SCAND1-202ENST00000373991 KIAA1210Q9ULL0 1709 aa31.44■■■□□ 2.62
SCAND1-202ENST00000373991 LAMC1P11047 1609 aa31.44■■■□□ 2.62
SCAND1-202ENST00000373991 DMRT2Q9Y5R5 561 aa31.43■■■□□ 2.62
SCAND1-202ENST00000373991 CARD11Q9BXL7 1154 aa31.42■■■□□ 2.62
SCAND1-202ENST00000373991 DIP2AQ14689 1571 aa31.4■■■□□ 2.62
SCAND1-202ENST00000373991 ADGRB1O14514 1584 aa31.39■■■□□ 2.62
SCAND1-202ENST00000373991 SETD1AO15047 1707 aaKnown RBP31.39■■■□□ 2.61
SCAND1-202ENST00000373991 STK26Q9P289 416 aa31.38■■■□□ 2.61
SCAND1-202ENST00000373991 GPRASP1Q5JY77 1395 aa31.38■■■□□ 2.61
SCAND1-202ENST00000373991 ASXL1Q8IXJ9 1541 aa31.37■■■□□ 2.61
SCAND1-202ENST00000373991 YTHDC2Q9H6S0 1430 aaKnown RBP31.33■■■□□ 2.61
SCAND1-202ENST00000373991 TRAK1Q9UPV9 953 aa31.33■■■□□ 2.61
SCAND1-202ENST00000373991 PIK3R4Q99570 1358 aa31.33■■■□□ 2.61
SCAND1-202ENST00000373991 AMOTL2Q9Y2J4 779 aa31.32■■■□□ 2.61
SCAND1-202ENST00000373991 PTPRUQ92729 1446 aa31.31■■■□□ 2.6
SCAND1-202ENST00000373991 LRPPRCP42704 1394 aaKnown RBP31.31■■■□□ 2.6
SCAND1-202ENST00000373991 ABCC11Q96J66 1382 aa31.27■■■□□ 2.6
SCAND1-202ENST00000373991 KCNA6P17658 529 aa31.27■■■□□ 2.6
SCAND1-202ENST00000373991 USP47Q96K76 1375 aa31.24■■■□□ 2.59
SCAND1-202ENST00000373991 EIF4G2P78344 907 aaKnown RBP eCLIP31.23■■■□□ 2.59
SCAND1-202ENST00000373991 CHD2O14647 1828 aaKnown RBP31.22■■■□□ 2.59
SCAND1-202ENST00000373991 ZNF335Q9H4Z2 1342 aaPredicted RBP31.21■■■□□ 2.59
SCAND1-202ENST00000373991 TECPR2O15040 1411 aa31.2■■■□□ 2.59
SCAND1-202ENST00000373991 EIF3AQ14152 1382 aaKnown RBP31.19■■■□□ 2.58
SCAND1-202ENST00000373991 ROBO2Q9HCK4 1378 aa31.19■■■□□ 2.58
SCAND1-202ENST00000373991 WAPLQ7Z5K2 1190 aa31.19■■■□□ 2.58
SCAND1-202ENST00000373991 PRAM1Q96QH2 718 aa31.19■■■□□ 2.58
SCAND1-202ENST00000373991 ST20-MTHFSA0A0A6YYL1 179 aa31.18■■■□□ 2.58
SCAND1-202ENST00000373991 HSPA5P11021 654 aaKnown RBP31.18■■■□□ 2.58
SCAND1-202ENST00000373991 POGKQ9P215 609 aa31.18■■■□□ 2.58
SCAND1-202ENST00000373991 SIRT1Q96EB6 747 aa31.18■■■□□ 2.58
SCAND1-202ENST00000373991 XRN1Q8IZH2 1706 aaKnown RBP31.17■■■□□ 2.58
SCAND1-202ENST00000373991 HIRIP3Q9BW71 556 aaPredicted RBP31.17■■■□□ 2.58
SCAND1-202ENST00000373991 SAFB2Q14151 953 aaKnown RBP eCLIP31.16■■■□□ 2.58
SCAND1-202ENST00000373991 DLC1Q96QB1 1528 aa31.16■■■□□ 2.58
SCAND1-202ENST00000373991 CENPJQ9HC77 1338 aaPredicted RBP31.15■■■□□ 2.58
SCAND1-202ENST00000373991 NWD1Q149M9 1564 aa31.14■■■□□ 2.58
SCAND1-202ENST00000373991 CPS1P31327 1500 aa31.14■■■□□ 2.58
SCAND1-202ENST00000373991 PTCH1Q13635 1447 aa31.14■■■□□ 2.57
SCAND1-202ENST00000373991 FAM135BQ49AJ0 1406 aa31.14■■■□□ 2.57
SCAND1-202ENST00000373991 KNDC1Q76NI1 1749 aa31.13■■■□□ 2.57
SCAND1-202ENST00000373991 PLEKHH1Q9ULM0 1364 aa31.13■■■□□ 2.57
SCAND1-202ENST00000373991 PROSER2Q86WR7 435 aaPredicted RBP31.12■■■□□ 2.57
SCAND1-202ENST00000373991 ARHGEF28Q8N1W1 1705 aaKnown RBP31.12■■■□□ 2.57
SCAND1-202ENST00000373991 RBM33Q96EV2 1170 aaKnown RBP31.11■■■□□ 2.57
SCAND1-202ENST00000373991 STRCP1A6NGW2 1772 aa31.11■■■□□ 2.57
SCAND1-202ENST00000373991 NKTRP30414 1462 aaKnown RBP31.09■■■□□ 2.57
SCAND1-202ENST00000373991 TESK2Q96S53 571 aa31.05■■■□□ 2.56
SCAND1-202ENST00000373991 MINK1Q8N4C8 1332 aaPredicted RBP31.05■■■□□ 2.56
SCAND1-202ENST00000373991 TMEM94Q12767 1356 aa31.02■■■□□ 2.56
SCAND1-202ENST00000373991 C14orf37Q86TY3 774 aa31.01■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 152.5 ms