RNA–Protein interactions for RNA: ENST00000373514.2

CDX4-201, Transcript of caudal type homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX4, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4-201ENST00000373514 SPATA31E1Q6ZUB1 1445 aa27.18■■□□□ 1.94
CDX4-201ENST00000373514 LTKP29376 864 aa27.17■■□□□ 1.94
CDX4-201ENST00000373514 MED14O60244 1454 aa27.15■■□□□ 1.94
CDX4-201ENST00000373514 NPHP4O75161 1426 aaPredicted RBP27.15■■□□□ 1.94
CDX4-201ENST00000373514 NUTM2DQ5VT03 806 aaPredicted RBP27.15■■□□□ 1.94
CDX4-201ENST00000373514 ANKLE2Q86XL3 938 aa27.15■■□□□ 1.94
CDX4-201ENST00000373514 ZNF326Q5BKZ1 582 aaKnown RBP27.14■■□□□ 1.94
CDX4-201ENST00000373514 TXNDC2Q86VQ3 553 aa27.13■■□□□ 1.93
CDX4-201ENST00000373514 NRXN3Q9Y4C0 1643 aa27.12■■□□□ 1.93
CDX4-201ENST00000373514 SENP3Q9H4L4 574 aaPredicted RBP27.11■■□□□ 1.93
CDX4-201ENST00000373514 EID1Q9Y6B2 187 aa27.09■■□□□ 1.93
CDX4-201ENST00000373514 RGL3Q3MIN7 710 aa27.08■■□□□ 1.93
CDX4-201ENST00000373514 PPP1R15AO75807 674 aaPredicted RBP27.05■■□□□ 1.92
CDX4-201ENST00000373514 PLEKHG1Q9ULL1 1385 aa27.04■■□□□ 1.92
CDX4-201ENST00000373514 SIN3AQ96ST3 1273 aa27.04■■□□□ 1.92
CDX4-201ENST00000373514 STRCP1A6NGW2 1772 aa27.04■■□□□ 1.92
CDX4-201ENST00000373514 SETD1AO15047 1707 aaKnown RBP27.04■■□□□ 1.92
CDX4-201ENST00000373514 SETBP1Q9Y6X0 1596 aa27.03■■□□□ 1.92
CDX4-201ENST00000373514 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.01■■□□□ 1.91
CDX4-201ENST00000373514 DMRT2Q9Y5R5 561 aa27■■□□□ 1.91
CDX4-201ENST00000373514 DIP2AQ14689 1571 aa26.99■■□□□ 1.91
CDX4-201ENST00000373514 RPGRIP1LQ68CZ1 1315 aa26.98■■□□□ 1.91
CDX4-201ENST00000373514 ADAMTS13Q76LX8 1427 aa26.98■■□□□ 1.91
CDX4-201ENST00000373514 MYOM2P54296 1465 aa26.97■■□□□ 1.91
CDX4-201ENST00000373514 HDGFP51858 240 aaKnown RBP26.96■■□□□ 1.91
CDX4-201ENST00000373514 NEUROD1Q13562 356 aa26.95■■□□□ 1.91
CDX4-201ENST00000373514 BCANQ96GW7 911 aa26.95■■□□□ 1.9
CDX4-201ENST00000373514 SLC26A8Q96RN1 970 aa26.95■■□□□ 1.9
CDX4-201ENST00000373514 CHD2O14647 1828 aaKnown RBP26.94■■□□□ 1.9
CDX4-201ENST00000373514 ADGRF5Q8IZF2 1346 aa26.94■■□□□ 1.9
CDX4-201ENST00000373514 ZNF335Q9H4Z2 1342 aaPredicted RBP26.94■■□□□ 1.9
CDX4-201ENST00000373514 LTBP4Q8N2S1 1624 aa26.93■■□□□ 1.9
CDX4-201ENST00000373514 ALKQ9UM73 1620 aa26.93■■□□□ 1.9
CDX4-201ENST00000373514 NRXN1Q9ULB1 1477 aa26.92■■□□□ 1.9
CDX4-201ENST00000373514 PIK3C2GO75747 1445 aa26.92■■□□□ 1.9
CDX4-201ENST00000373514 NWD1Q149M9 1564 aa26.91■■□□□ 1.9
CDX4-201ENST00000373514 VGFO15240 615 aaPredicted RBP26.9■■□□□ 1.9
CDX4-201ENST00000373514 LAMC1P11047 1609 aa26.9■■□□□ 1.9
CDX4-201ENST00000373514 DCAF11Q8TEB1 546 aa26.87■■□□□ 1.89
CDX4-201ENST00000373514 ASXL1Q8IXJ9 1541 aa26.87■■□□□ 1.89
CDX4-201ENST00000373514 XRN1Q8IZH2 1706 aaKnown RBP26.87■■□□□ 1.89
CDX4-201ENST00000373514 KDM2AQ9Y2K7 1162 aa26.85■■□□□ 1.89
CDX4-201ENST00000373514 XIRP1Q702N8 1843 aaKnown RBP26.85■■□□□ 1.89
CDX4-201ENST00000373514 CCER1Q8TC90 406 aaPredicted RBP26.85■■□□□ 1.89
CDX4-201ENST00000373514 METP08581 1390 aa26.83■■□□□ 1.89
CDX4-201ENST00000373514 PTPRUQ92729 1446 aa26.83■■□□□ 1.88
CDX4-201ENST00000373514 L3MBTL2Q969R5 705 aa26.81■■□□□ 1.88
CDX4-201ENST00000373514 TBX22Q9Y458 520 aa26.81■■□□□ 1.88
CDX4-201ENST00000373514 CPS1P31327 1500 aa26.8■■□□□ 1.88
CDX4-201ENST00000373514 KIAA1210Q9ULL0 1709 aa26.79■■□□□ 1.88
CDX4-201ENST00000373514 TONSLQ96HA7 1378 aa26.79■■□□□ 1.88
CDX4-201ENST00000373514 CLSPNQ9HAW4 1339 aa26.77■■□□□ 1.88
CDX4-201ENST00000373514 PRAG1Q86YV5 1406 aa26.77■■□□□ 1.88
CDX4-201ENST00000373514 TRPM1Q7Z4N2 1603 aa26.76■■□□□ 1.88
CDX4-201ENST00000373514 KNDC1Q76NI1 1749 aa26.76■■□□□ 1.88
CDX4-201ENST00000373514 NKTRP30414 1462 aaKnown RBP26.76■■□□□ 1.87
CDX4-201ENST00000373514 PIK3R4Q99570 1358 aa26.75■■□□□ 1.87
CDX4-201ENST00000373514 ADGRB1O14514 1584 aa26.74■■□□□ 1.87
CDX4-201ENST00000373514 CFAP70Q5T0N1 1121 aa26.74■■□□□ 1.87
CDX4-201ENST00000373514 LRRC7Q96NW7 1537 aa26.74■■□□□ 1.87
CDX4-201ENST00000373514 KCNA6P17658 529 aa26.72■■□□□ 1.87
CDX4-201ENST00000373514 TMEM132EQ6IEE7 984 aa26.7■■□□□ 1.86
CDX4-201ENST00000373514 C14orf93Q9H972 538 aaKnown RBP26.7■■□□□ 1.86
CDX4-201ENST00000373514 STAC3Q96MF2 364 aa26.68■■□□□ 1.86
CDX4-201ENST00000373514 AMOTL2Q9Y2J4 779 aa26.68■■□□□ 1.86
CDX4-201ENST00000373514 NALCNQ8IZF0 1738 aa26.67■■□□□ 1.86
CDX4-201ENST00000373514 RBM33Q96EV2 1170 aaKnown RBP26.66■■□□□ 1.86
CDX4-201ENST00000373514 ARHGEF28Q8N1W1 1705 aaKnown RBP26.66■■□□□ 1.86
CDX4-201ENST00000373514 YTHDC2Q9H6S0 1430 aaKnown RBP26.65■■□□□ 1.86
CDX4-201ENST00000373514 CERKQ8TCT0 537 aa26.64■■□□□ 1.85
CDX4-201ENST00000373514 PTCH1Q13635 1447 aa26.63■■□□□ 1.85
CDX4-201ENST00000373514 TMEM94Q12767 1356 aa26.63■■□□□ 1.85
CDX4-201ENST00000373514 NBPF8Q3BBV2 869 aa26.63■■□□□ 1.85
CDX4-201ENST00000373514 LRPPRCP42704 1394 aaKnown RBP26.62■■□□□ 1.85
CDX4-201ENST00000373514 ROBO2Q9HCK4 1378 aa26.62■■□□□ 1.85
CDX4-201ENST00000373514 STK26Q9P289 416 aa26.61■■□□□ 1.85
CDX4-201ENST00000373514 IQSEC2Q5JU85 1478 aa26.61■■□□□ 1.85
CDX4-201ENST00000373514 TECPR2O15040 1411 aa26.61■■□□□ 1.85
CDX4-201ENST00000373514 PROSER2Q86WR7 435 aaPredicted RBP26.6■■□□□ 1.85
CDX4-201ENST00000373514 NBPF1Q3BBV0 1214 aa26.59■■□□□ 1.85
CDX4-201ENST00000373514 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.58■■□□□ 1.85
CDX4-201ENST00000373514 ZEB1P37275 1124 aaPredicted RBP26.58■■□□□ 1.85
CDX4-201ENST00000373514 DLC1Q96QB1 1528 aa26.57■■□□□ 1.84
CDX4-201ENST00000373514 RALGAPBQ86X10 1494 aa26.57■■□□□ 1.84
CDX4-201ENST00000373514 ABCC11Q96J66 1382 aa26.55■■□□□ 1.84
CDX4-201ENST00000373514 PLEKHH1Q9ULM0 1364 aa26.54■■□□□ 1.84
CDX4-201ENST00000373514 ROCK2O75116 1388 aaKnown RBP26.52■■□□□ 1.84
CDX4-201ENST00000373514 ADGRL3Q9HAR2 1447 aa26.5■■□□□ 1.83
CDX4-201ENST00000373514 TRAK1Q9UPV9 953 aa26.5■■□□□ 1.83
CDX4-201ENST00000373514 QRICH2Q9H0J4 1663 aa26.5■■□□□ 1.83
CDX4-201ENST00000373514 WAPLQ7Z5K2 1190 aa26.49■■□□□ 1.83
CDX4-201ENST00000373514 TIMELESSQ9UNS1 1208 aa26.49■■□□□ 1.83
CDX4-201ENST00000373514 FAM135BQ49AJ0 1406 aa26.48■■□□□ 1.83
CDX4-201ENST00000373514 NCOA3Q9Y6Q9 1424 aa26.47■■□□□ 1.83
CDX4-201ENST00000373514 C14orf37Q86TY3 774 aa26.47■■□□□ 1.83
CDX4-201ENST00000373514 MSH6P52701 1360 aa26.46■■□□□ 1.83
CDX4-201ENST00000373514 GPRASP1Q5JY77 1395 aa26.46■■□□□ 1.83
CDX4-201ENST00000373514 CDC42BPGQ6DT37 1551 aa26.45■■□□□ 1.82
CDX4-201ENST00000373514 PRAM1Q96QH2 718 aa26.44■■□□□ 1.82
CDX4-201ENST00000373514 ADGRB2O60241 1585 aa26.44■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms