RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 EIF4G3O43432 1585 aaKnown RBP22.62■■□□□ 1.21
TRAF3IP1-201ENST00000373327 E9PSI1 815 aa22.62■■□□□ 1.21
TRAF3IP1-201ENST00000373327 DHX29Q7Z478 1369 aaKnown RBP22.61■■□□□ 1.21
TRAF3IP1-201ENST00000373327 TCP11L2Q8N4U5 519 aa22.61■■□□□ 1.21
TRAF3IP1-201ENST00000373327 TEX14Q8IWB6 1497 aa22.6■■□□□ 1.21
TRAF3IP1-201ENST00000373327 CGNL1Q0VF96 1302 aa22.6■■□□□ 1.21
TRAF3IP1-201ENST00000373327 CENPQQ7L2Z9 268 aaPredicted RBP22.6■■□□□ 1.21
TRAF3IP1-201ENST00000373327 VGFO15240 615 aaPredicted RBP22.59■■□□□ 1.21
TRAF3IP1-201ENST00000373327 LMOD2Q6P5Q4 547 aa22.59■■□□□ 1.21
TRAF3IP1-201ENST00000373327 TPRNQ4KMQ1 711 aa22.59■■□□□ 1.21
TRAF3IP1-201ENST00000373327 MFAP1P55081 439 aaKnown RBP22.58■■□□□ 1.21
TRAF3IP1-201ENST00000373327 EVC2Q86UK5 1308 aa22.57■■□□□ 1.2
TRAF3IP1-201ENST00000373327 TERF2IPQ9NYB0 399 aa22.57■■□□□ 1.2
TRAF3IP1-201ENST00000373327 HMOX1P09601 288 aa22.56■■□□□ 1.2
TRAF3IP1-201ENST00000373327 SYCP2Q9BX26 1530 aa22.56■■□□□ 1.2
TRAF3IP1-201ENST00000373327 TSR2Q969E8 191 aaKnown RBP22.56■■□□□ 1.2
TRAF3IP1-201ENST00000373327 TESK2Q96S53 571 aa22.55■■□□□ 1.2
TRAF3IP1-201ENST00000373327 DNMT1P26358 1616 aaKnown RBP22.54■■□□□ 1.2
TRAF3IP1-201ENST00000373327 FAM161AQ3B820 660 aa22.54■■□□□ 1.2
TRAF3IP1-201ENST00000373327 GZF1Q9H116 711 aaPredicted RBP22.54■■□□□ 1.2
TRAF3IP1-201ENST00000373327 RWDD1Q9H446 243 aaPredicted RBP22.51■■□□□ 1.19
TRAF3IP1-201ENST00000373327 FAM69CQ0P6D2 419 aa22.5■■□□□ 1.19
TRAF3IP1-201ENST00000373327 RUNDC1Q96C34 613 aa22.5■■□□□ 1.19
TRAF3IP1-201ENST00000373327 FOXD4L1Q9NU39 408 aa22.5■■□□□ 1.19
TRAF3IP1-201ENST00000373327 RIPK4P57078 832 aa22.49■■□□□ 1.19
TRAF3IP1-201ENST00000373327 TRAPPC8Q9Y2L5 1435 aa22.49■■□□□ 1.19
TRAF3IP1-201ENST00000373327 DENND4BO75064 1496 aaPredicted RBP22.49■■□□□ 1.19
TRAF3IP1-201ENST00000373327 BACH2Q9BYV9 841 aa22.48■■□□□ 1.19
TRAF3IP1-201ENST00000373327 PRAM1Q96QH2 718 aa22.48■■□□□ 1.19
TRAF3IP1-201ENST00000373327 PER1O15534 1290 aaPredicted RBP22.48■■□□□ 1.19
TRAF3IP1-201ENST00000373327 RALGAPBQ86X10 1494 aa22.47■■□□□ 1.19
TRAF3IP1-201ENST00000373327 FAM135AQ9P2D6 1515 aa22.47■■□□□ 1.19
TRAF3IP1-201ENST00000373327 PRAG1Q86YV5 1406 aa22.47■■□□□ 1.19
TRAF3IP1-201ENST00000373327 CEP170Q5SW79 1584 aa22.47■■□□□ 1.19
TRAF3IP1-201ENST00000373327 FBLN1P23142 703 aa22.46■■□□□ 1.19
TRAF3IP1-201ENST00000373327 SPATA31E1Q6ZUB1 1445 aa22.46■■□□□ 1.19
TRAF3IP1-201ENST00000373327 MS4A1P11836 297 aa22.45■■□□□ 1.18
TRAF3IP1-201ENST00000373327 LTV1Q96GA3 475 aaPredicted RBP22.44■■□□□ 1.18
TRAF3IP1-201ENST00000373327 PMFBP1Q8TBY8 1022 aa22.44■■□□□ 1.18
TRAF3IP1-201ENST00000373327 NCLP19338 710 aaKnown RBP22.43■■□□□ 1.18
TRAF3IP1-201ENST00000373327 ZKSCAN2Q63HK3 967 aa22.43■■□□□ 1.18
TRAF3IP1-201ENST00000373327 DUSP27Q5VZP5 1158 aa22.43■■□□□ 1.18
TRAF3IP1-201ENST00000373327 SLFN5Q08AF3 891 aa22.42■■□□□ 1.18
TRAF3IP1-201ENST00000373327 ITSN2Q9NZM3 1697 aa22.42■■□□□ 1.18
TRAF3IP1-201ENST00000373327 DIAPH1O60610 1272 aaKnown RBP22.41■■□□□ 1.18
TRAF3IP1-201ENST00000373327 EXOSC9Q06265 439 aaKnown RBP22.41■■□□□ 1.18
TRAF3IP1-201ENST00000373327 AMER1Q5JTC6 1135 aaPredicted RBP22.41■■□□□ 1.18
TRAF3IP1-201ENST00000373327 HSP90AB1P08238 724 aaKnown RBP22.4■■□□□ 1.18
TRAF3IP1-201ENST00000373327 GCC2Q8IWJ2 1684 aa22.4■■□□□ 1.18
TRAF3IP1-201ENST00000373327 IPO8O15397 1037 aaKnown RBP22.4■■□□□ 1.18
TRAF3IP1-201ENST00000373327 WWC1Q8IX03 1113 aa22.4■■□□□ 1.18
TRAF3IP1-201ENST00000373327 NSD3Q9BZ95 1437 aa22.4■■□□□ 1.18
TRAF3IP1-201ENST00000373327 SLC4A10Q6U841 1118 aa22.4■■□□□ 1.18
TRAF3IP1-201ENST00000373327 CABP1Q9NZU7 370 aa22.4■■□□□ 1.18
TRAF3IP1-201ENST00000373327 TRHP20396 242 aaPredicted RBP22.39■■□□□ 1.18
TRAF3IP1-201ENST00000373327 PNNQ9H307 717 aaKnown RBP22.39■■□□□ 1.17
TRAF3IP1-201ENST00000373327 FBXO31Q5XUX0 539 aaPredicted RBP22.39■■□□□ 1.17
TRAF3IP1-201ENST00000373327 NUP160Q12769 1436 aa22.38■■□□□ 1.17
TRAF3IP1-201ENST00000373327 DZIP1LQ8IYY4 767 aaKnown RBP22.38■■□□□ 1.17
TRAF3IP1-201ENST00000373327 SPINK5Q9NQ38 1064 aaPredicted RBP22.38■■□□□ 1.17
TRAF3IP1-201ENST00000373327 LRRIQ1Q96JM4 1722 aa22.37■■□□□ 1.17
TRAF3IP1-201ENST00000373327 LNPKQ9C0E8 428 aa22.37■■□□□ 1.17
TRAF3IP1-201ENST00000373327 THUMPD2Q9BTF0 503 aaKnown RBP22.37■■□□□ 1.17
TRAF3IP1-201ENST00000373327 ADGRL1O94910 1474 aa22.36■■□□□ 1.17
TRAF3IP1-201ENST00000373327 PARD3Q8TEW0 1356 aa22.35■■□□□ 1.17
TRAF3IP1-201ENST00000373327 ANKRD45Q5TZF3 282 aa22.35■■□□□ 1.17
TRAF3IP1-201ENST00000373327 NECTIN2Q92692 538 aa22.35■■□□□ 1.17
TRAF3IP1-201ENST00000373327 WAPLQ7Z5K2 1190 aa22.35■■□□□ 1.17
TRAF3IP1-201ENST00000373327 TXNDC2Q86VQ3 553 aa22.35■■□□□ 1.17
TRAF3IP1-201ENST00000373327 C1orf115Q9H7X2 142 aa22.35■■□□□ 1.17
TRAF3IP1-201ENST00000373327 STAC3Q96MF2 364 aa22.34■■□□□ 1.17
TRAF3IP1-201ENST00000373327 HSCBQ8IWL3 235 aa22.34■■□□□ 1.17
TRAF3IP1-201ENST00000373327 IDI1Q13907 227 aa22.34■■□□□ 1.17
TRAF3IP1-201ENST00000373327 CARD14Q9BXL6 1004 aa22.34■■□□□ 1.17
TRAF3IP1-201ENST00000373327 TNNQ9UQP3 1299 aa22.34■■□□□ 1.17
TRAF3IP1-201ENST00000373327 NOS1P29475 1434 aa22.34■■□□□ 1.17
TRAF3IP1-201ENST00000373327 A2MP01023 1474 aa22.33■■□□□ 1.17
TRAF3IP1-201ENST00000373327 CFAP65Q6ZU64 1925 aaKnown RBP22.33■■□□□ 1.17
TRAF3IP1-201ENST00000373327 FANCAO15360 1455 aa22.33■■□□□ 1.17
TRAF3IP1-201ENST00000373327 PRKAR2BP31323 418 aa22.33■■□□□ 1.16
TRAF3IP1-201ENST00000373327 PLEKHH1Q9ULM0 1364 aa22.33■■□□□ 1.16
TRAF3IP1-201ENST00000373327 NUTM2GQ5VZR2 741 aa22.32■■□□□ 1.16
TRAF3IP1-201ENST00000373327 NFKBIBQ15653 356 aa22.31■■□□□ 1.16
TRAF3IP1-201ENST00000373327 DMRT2Q9Y5R5 561 aa22.31■■□□□ 1.16
TRAF3IP1-201ENST00000373327 NGDNQ8NEJ9 315 aaKnown RBP22.31■■□□□ 1.16
TRAF3IP1-201ENST00000373327 PDZRN3Q9UPQ7 1066 aa22.31■■□□□ 1.16
TRAF3IP1-201ENST00000373327 PLCH2O75038 1416 aa22.31■■□□□ 1.16
TRAF3IP1-201ENST00000373327 RTF1Q92541 710 aaKnown RBP22.31■■□□□ 1.16
TRAF3IP1-201ENST00000373327 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.3■■□□□ 1.16
TRAF3IP1-201ENST00000373327 CDK19Q9BWU1 502 aa22.3■■□□□ 1.16
TRAF3IP1-201ENST00000373327 COG3Q96JB2 828 aa22.3■■□□□ 1.16
TRAF3IP1-201ENST00000373327 ADGRL2O95490 1459 aa22.28■■□□□ 1.16
TRAF3IP1-201ENST00000373327 FRAT2O75474 233 aaPredicted RBP22.28■■□□□ 1.16
TRAF3IP1-201ENST00000373327 IGHDP01880 384 aa22.26■■□□□ 1.15
TRAF3IP1-201ENST00000373327 RRS1Q15050 365 aaKnown RBP22.26■■□□□ 1.15
TRAF3IP1-201ENST00000373327 SCAF11Q99590 1463 aaKnown RBP22.26■■□□□ 1.15
TRAF3IP1-201ENST00000373327 KDM5BQ9UGL1 1544 aa22.26■■□□□ 1.15
TRAF3IP1-201ENST00000373327 NOB1Q9ULX3 412 aaKnown RBP22.26■■□□□ 1.15
TRAF3IP1-201ENST00000373327 CD109Q6YHK3 1445 aa22.25■■□□□ 1.15
TRAF3IP1-201ENST00000373327 A0A0G2JS52 829 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms