RNA–Protein interactions for RNA: ENST00000372899.5

UBR2-201, Transcript of ubiquitin protein ligase E3 component n-recognin 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBR2, Length 7,857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR2-201ENST00000372899 PPM1FP49593 454 aaPredicted RBP17.52■□□□□ 0.4
UBR2-201ENST00000372899 SAFBQ15424 915 aaKnown RBP eCLIP17.52■□□□□ 0.39
UBR2-201ENST00000372899 SLC4A3P48751 1232 aa17.52■□□□□ 0.39
UBR2-201ENST00000372899 CCDC146Q8IYE0 955 aa17.51■□□□□ 0.39
UBR2-201ENST00000372899 IFIT2P09913 472 aaKnown RBP17.51■□□□□ 0.39
UBR2-201ENST00000372899 CENPJQ9HC77 1338 aaPredicted RBP17.5■□□□□ 0.39
UBR2-201ENST00000372899 MYO6Q9UM54 1294 aa17.5■□□□□ 0.39
UBR2-201ENST00000372899 ANO2Q9NQ90 1003 aa17.5■□□□□ 0.39
UBR2-201ENST00000372899 CCDC97Q96F63 343 aaPredicted RBP17.5■□□□□ 0.39
UBR2-201ENST00000372899 OFD1O75665 1012 aa17.49■□□□□ 0.39
UBR2-201ENST00000372899 ZKSCAN1P17029 563 aaPredicted RBP17.48■□□□□ 0.39
UBR2-201ENST00000372899 FOXD4L6Q3SYB3 417 aaPredicted RBP17.48■□□□□ 0.39
UBR2-201ENST00000372899 FOXD4L3Q6VB84 417 aaPredicted RBP17.48■□□□□ 0.39
UBR2-201ENST00000372899 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.48■□□□□ 0.39
UBR2-201ENST00000372899 ZRSR2Q15696 482 aaKnown RBP17.48■□□□□ 0.39
UBR2-201ENST00000372899 NUP155O75694 1391 aa17.48■□□□□ 0.39
UBR2-201ENST00000372899 CLUAP1Q96AJ1 413 aa17.48■□□□□ 0.39
UBR2-201ENST00000372899 ZNF592Q92610 1267 aa17.47■□□□□ 0.39
UBR2-201ENST00000372899 RNF20Q5VTR2 975 aa17.47■□□□□ 0.39
UBR2-201ENST00000372899 XBP1P17861 261 aa17.47■□□□□ 0.39
UBR2-201ENST00000372899 SYCP1Q15431 976 aa17.47■□□□□ 0.39
UBR2-201ENST00000372899 ANKRD30AQ9BXX3 1397 aa17.47■□□□□ 0.39
UBR2-201ENST00000372899 MTMR7Q9Y216 660 aa17.46■□□□□ 0.39
UBR2-201ENST00000372899 G3BP1Q13283 466 aaKnown RBP eCLIP17.46■□□□□ 0.39
UBR2-201ENST00000372899 ANKRD45Q5TZF3 282 aa17.46■□□□□ 0.39
UBR2-201ENST00000372899 HOMER1Q86YM7 354 aa17.46■□□□□ 0.38
UBR2-201ENST00000372899 UACAQ9BZF9 1416 aa17.44■□□□□ 0.38
UBR2-201ENST00000372899 DDX11L8A8MPP1 907 aa17.44■□□□□ 0.38
UBR2-201ENST00000372899 TEX35Q5T0J7 233 aa17.44■□□□□ 0.38
UBR2-201ENST00000372899 NECTIN2Q92692 538 aa17.44■□□□□ 0.38
UBR2-201ENST00000372899 SLC3A2P08195 630 aaKnown RBP17.43■□□□□ 0.38
UBR2-201ENST00000372899 TRAK1Q9UPV9 953 aa17.43■□□□□ 0.38
UBR2-201ENST00000372899 CDK5RAP3Q96JB5 506 aa17.43■□□□□ 0.38
UBR2-201ENST00000372899 KAT6BQ8WYB5 2073 aa17.42■□□□□ 0.38
UBR2-201ENST00000372899 HSPA5P11021 654 aaKnown RBP17.42■□□□□ 0.38
UBR2-201ENST00000372899 PLIN1O60240 522 aa17.42■□□□□ 0.38
UBR2-201ENST00000372899 RALYLQ86SE5 291 aaKnown RBP17.42■□□□□ 0.38
UBR2-201ENST00000372899 DEKP35659 375 aaKnown RBP17.41■□□□□ 0.38
UBR2-201ENST00000372899 CUX2O14529 1486 aa17.41■□□□□ 0.38
UBR2-201ENST00000372899 KIF6Q6ZMV9 814 aa17.41■□□□□ 0.38
UBR2-201ENST00000372899 SPDYE4A6NLX3 237 aa17.41■□□□□ 0.38
UBR2-201ENST00000372899 BICD2Q8TD16 824 aa17.41■□□□□ 0.38
UBR2-201ENST00000372899 RAPGEF4Q8WZA2 1011 aa17.4■□□□□ 0.38
UBR2-201ENST00000372899 MAP7D2Q96T17 732 aa17.4■□□□□ 0.38
UBR2-201ENST00000372899 ROCK1Q13464 1354 aa17.39■□□□□ 0.38
UBR2-201ENST00000372899 DCTN1Q14203 1278 aa17.39■□□□□ 0.37
UBR2-201ENST00000372899 RIC3Q7Z5B4 369 aa17.39■□□□□ 0.37
UBR2-201ENST00000372899 EVC2Q86UK5 1308 aa17.39■□□□□ 0.37
UBR2-201ENST00000372899 MPHOSPH10O00566 681 aaKnown RBP17.39■□□□□ 0.37
UBR2-201ENST00000372899 TRIM21P19474 475 aaKnown RBP17.39■□□□□ 0.37
UBR2-201ENST00000372899 FOSBP53539 338 aa17.39■□□□□ 0.37
UBR2-201ENST00000372899 ACBD3Q9H3P7 528 aa17.39■□□□□ 0.37
UBR2-201ENST00000372899 OLFM4Q6UX06 510 aa17.38■□□□□ 0.37
UBR2-201ENST00000372899 CARMIL1Q5VZK9 1371 aa17.38■□□□□ 0.37
UBR2-201ENST00000372899 NEFHP12036 1026 aa17.38■□□□□ 0.37
UBR2-201ENST00000372899 WASHC4Q2M389 1173 aa17.38■□□□□ 0.37
UBR2-201ENST00000372899 PRDM2Q13029 1718 aa17.38■□□□□ 0.37
UBR2-201ENST00000372899 CGNL1Q0VF96 1302 aa17.38■□□□□ 0.37
UBR2-201ENST00000372899 CAGE1Q8TC20 777 aa17.38■□□□□ 0.37
UBR2-201ENST00000372899 NEBLO76041 1014 aa17.37■□□□□ 0.37
UBR2-201ENST00000372899 ATP2B2Q01814 1243 aa17.37■□□□□ 0.37
UBR2-201ENST00000372899 ANKRD18AQ8IVF6 992 aa17.37■□□□□ 0.37
UBR2-201ENST00000372899 ELL2O00472 640 aaPredicted RBP17.37■□□□□ 0.37
UBR2-201ENST00000372899 TMEM87AQ8NBN3 555 aa17.37■□□□□ 0.37
UBR2-201ENST00000372899 SASS6Q6UVJ0 657 aa17.37■□□□□ 0.37
UBR2-201ENST00000372899 HNRNPMP52272 730 aaKnown RBP eCLIP17.36■□□□□ 0.377e-7■■□□□ 13.5
UBR2-201ENST00000372899 NEUROD6Q96NK8 337 aa17.36■□□□□ 0.37
UBR2-201ENST00000372899 KRT18P05783 430 aaKnown RBP17.36■□□□□ 0.37
UBR2-201ENST00000372899 SART3Q15020 963 aaKnown RBP17.36■□□□□ 0.37
UBR2-201ENST00000372899 PHLDB1Q86UU1 1377 aa17.36■□□□□ 0.37
UBR2-201ENST00000372899 DESP17661 470 aa17.36■□□□□ 0.37
UBR2-201ENST00000372899 SETD5Q9C0A6 1442 aa17.35■□□□□ 0.37
UBR2-201ENST00000372899 WDHD1O75717 1129 aaPredicted RBP17.35■□□□□ 0.37
UBR2-201ENST00000372899 CCDC191Q8NCU4 936 aa17.35■□□□□ 0.37
UBR2-201ENST00000372899 NACADO15069 1562 aa17.35■□□□□ 0.37
UBR2-201ENST00000372899 RBM5P52756 815 aaKnown RBP eCLIP17.35■□□□□ 0.37
UBR2-201ENST00000372899 SEPT7Q16181 437 aaKnown RBP17.35■□□□□ 0.37
UBR2-201ENST00000372899 REC8O95072 547 aa17.35■□□□□ 0.37
UBR2-201ENST00000372899 HSP90AB4PQ58FF6 505 aa17.35■□□□□ 0.37
UBR2-201ENST00000372899 RRP7AQ9Y3A4 280 aaKnown RBP17.35■□□□□ 0.37
UBR2-201ENST00000372899 ZNF771Q7L3S4 317 aaPredicted RBP17.35■□□□□ 0.37
UBR2-201ENST00000372899 MATR3P43243 847 aaKnown RBP eCLIP17.34■□□□□ 0.377e-12■■□□□ 12
UBR2-201ENST00000372899 CHMP5Q9NZZ3 219 aa17.34■□□□□ 0.37
UBR2-201ENST00000372899 TBC1D2BQ9UPU7 963 aa17.34■□□□□ 0.37
UBR2-201ENST00000372899 DDX49Q9Y6V7 483 aaKnown RBP17.34■□□□□ 0.37
UBR2-201ENST00000372899 IBSPP21815 317 aaPredicted RBP17.33■□□□□ 0.37
UBR2-201ENST00000372899 ERC2O15083 957 aa17.33■□□□□ 0.36
UBR2-201ENST00000372899 MAGEC2Q9UBF1 373 aaPredicted RBP17.33■□□□□ 0.36
UBR2-201ENST00000372899 ANKRD62A6NC57 917 aa17.32■□□□□ 0.36
UBR2-201ENST00000372899 SKOR2Q2VWA4 1001 aaPredicted RBP17.32■□□□□ 0.36
UBR2-201ENST00000372899 VGFO15240 615 aaPredicted RBP17.32■□□□□ 0.36
UBR2-201ENST00000372899 TXLNAP40222 546 aa17.32■□□□□ 0.36
UBR2-201ENST00000372899 PDS5BQ9NTI5 1447 aa17.32■□□□□ 0.36
UBR2-201ENST00000372899 CCER2I3L3R5 266 aa17.32■□□□□ 0.36
UBR2-201ENST00000372899 PDCL3Q9H2J4 239 aa17.32■□□□□ 0.36
UBR2-201ENST00000372899 FAM177BA6PVY3 158 aa17.31■□□□□ 0.36
UBR2-201ENST00000372899 DNAI2Q9GZS0 605 aa17.31■□□□□ 0.36
UBR2-201ENST00000372899 AIMP1Q12904 312 aaKnown RBP17.31■□□□□ 0.36
UBR2-201ENST00000372899 PAXIP1Q6ZW49 1069 aaPredicted RBP17.31■□□□□ 0.36
UBR2-201ENST00000372899 NAT10Q9H0A0 1025 aaKnown RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms