RNA–Protein interactions for RNA: ENST00000372542.5

SNX21-204, Transcript of sorting nexin family member 21, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNX21, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-204ENST00000372542 TSPOAP1O95153 1857 aa32.43■■■□□ 2.78
SNX21-204ENST00000372542 CFAP65Q6ZU64 1925 aaKnown RBP32.4■■■□□ 2.78
SNX21-204ENST00000372542 RALBP1Q15311 655 aa32.4■■■□□ 2.78
SNX21-204ENST00000372542 REREQ9P2R6 1566 aa32.4■■■□□ 2.78
SNX21-204ENST00000372542 PIK3C2BO00750 1634 aa32.4■■■□□ 2.78
SNX21-204ENST00000372542 PPLO60437 1756 aa32.39■■■□□ 2.78
SNX21-204ENST00000372542 RPGRIP1LQ68CZ1 1315 aa32.39■■■□□ 2.78
SNX21-204ENST00000372542 SIGLEC1Q9BZZ2 1709 aa32.39■■■□□ 2.78
SNX21-204ENST00000372542 ADGRF5Q8IZF2 1346 aa32.36■■■□□ 2.77
SNX21-204ENST00000372542 SLC24A1O60721 1099 aa32.36■■■□□ 2.77
SNX21-204ENST00000372542 CDCA8Q53HL2 280 aa32.36■■■□□ 2.77
SNX21-204ENST00000372542 FAM9BQ8IZU0 186 aa32.35■■■□□ 2.77
SNX21-204ENST00000372542 SYNMO15061 1565 aa32.34■■■□□ 2.77
SNX21-204ENST00000372542 SETBP1Q9Y6X0 1596 aa32.34■■■□□ 2.77
SNX21-204ENST00000372542 SUPT16HQ9Y5B9 1047 aaKnown RBP32.32■■■□□ 2.76
SNX21-204ENST00000372542 AGLP35573 1532 aa32.32■■■□□ 2.76
SNX21-204ENST00000372542 MYBBP1AQ9BQG0 1328 aaKnown RBP32.32■■■□□ 2.76
SNX21-204ENST00000372542 CHGAP10645 457 aaKnown RBP32.31■■■□□ 2.76
SNX21-204ENST00000372542 CFAP70Q5T0N1 1121 aa32.3■■■□□ 2.76
SNX21-204ENST00000372542 PER1O15534 1290 aaPredicted RBP32.3■■■□□ 2.76
SNX21-204ENST00000372542 BRD4O60885 1362 aaPredicted RBP32.29■■■□□ 2.76
SNX21-204ENST00000372542 KIF13AQ9H1H9 1805 aa32.29■■■□□ 2.76
SNX21-204ENST00000372542 PARD3Q8TEW0 1356 aa32.27■■■□□ 2.76
SNX21-204ENST00000372542 PIK3C2GO75747 1445 aa32.27■■■□□ 2.76
SNX21-204ENST00000372542 PPP6R1Q9UPN7 881 aa32.26■■■□□ 2.76
SNX21-204ENST00000372542 MYO3AQ8NEV4 1616 aa32.26■■■□□ 2.75
SNX21-204ENST00000372542 ZBED9Q6R2W3 1325 aa32.26■■■□□ 2.75
SNX21-204ENST00000372542 SLC52A1Q9NWF4 448 aa32.25■■■□□ 2.75
SNX21-204ENST00000372542 PREX1Q8TCU6 1659 aa32.25■■■□□ 2.75
SNX21-204ENST00000372542 CNGB1Q14028 1251 aaPredicted RBP32.23■■■□□ 2.75
SNX21-204ENST00000372542 TMC1Q8TDI8 760 aa32.23■■■□□ 2.75
SNX21-204ENST00000372542 PANK3Q9H999 370 aa32.23■■■□□ 2.75
SNX21-204ENST00000372542 KDM5AP29375 1690 aaKnown RBP32.21■■■□□ 2.75
SNX21-204ENST00000372542 C14orf93Q9H972 538 aaKnown RBP32.21■■■□□ 2.75
SNX21-204ENST00000372542 NEXMIFQ5QGS0 1516 aa32.2■■■□□ 2.74
SNX21-204ENST00000372542 SBNO2Q9Y2G9 1366 aa32.19■■■□□ 2.74
SNX21-204ENST00000372542 NEFLP07196 543 aa32.19■■■□□ 2.74
SNX21-204ENST00000372542 PNISRQ8TF01 805 aaKnown RBP32.19■■■□□ 2.74
SNX21-204ENST00000372542 NLRP13Q86W25 1043 aa32.17■■■□□ 2.74
SNX21-204ENST00000372542 VGFO15240 615 aaPredicted RBP32.16■■■□□ 2.74
SNX21-204ENST00000372542 ARHGEF40Q8TER5 1519 aa32.15■■■□□ 2.74
SNX21-204ENST00000372542 ADGRB1O14514 1584 aa32.15■■■□□ 2.74
SNX21-204ENST00000372542 ZFYVE9O95405 1425 aa32.15■■■□□ 2.74
SNX21-204ENST00000372542 MYOM1P52179 1685 aa32.13■■■□□ 2.73
SNX21-204ENST00000372542 IDI1Q13907 227 aa32.13■■■□□ 2.73
SNX21-204ENST00000372542 LRPPRCP42704 1394 aaKnown RBP32.13■■■□□ 2.73
SNX21-204ENST00000372542 ERVK-7P63135 1459 aa32.12■■■□□ 2.73
SNX21-204ENST00000372542 TMEM131LA2VDJ0 1609 aa32.11■■■□□ 2.73
SNX21-204ENST00000372542 FKBP8Q14318 412 aa32.08■■■□□ 2.73
SNX21-204ENST00000372542 CENPJQ9HC77 1338 aaPredicted RBP32.08■■■□□ 2.73
SNX21-204ENST00000372542 KNSTRNQ9Y448 316 aa32.07■■■□□ 2.72
SNX21-204ENST00000372542 CLTCQ00610 1675 aaKnown RBP32.06■■■□□ 2.72
SNX21-204ENST00000372542 MYO5BQ9ULV0 1848 aa32.05■■■□□ 2.72
SNX21-204ENST00000372542 CC2D1BQ5T0F9 858 aaKnown RBP32.05■■■□□ 2.72
SNX21-204ENST00000372542 NPC1L1Q9UHC9 1359 aa32.03■■■□□ 2.72
SNX21-204ENST00000372542 QRICH2Q9H0J4 1663 aa32.03■■■□□ 2.72
SNX21-204ENST00000372542 ASXL1Q8IXJ9 1541 aa32.03■■■□□ 2.72
SNX21-204ENST00000372542 INSRP06213 1382 aa32■■■□□ 2.71
SNX21-204ENST00000372542 SPATA31D1Q6ZQQ2 1576 aa32■■■□□ 2.71
SNX21-204ENST00000372542 PELP1Q8IZL8 1130 aaKnown RBP31.99■■■□□ 2.71
SNX21-204ENST00000372542 TRAK1Q9UPV9 953 aa31.98■■■□□ 2.71
SNX21-204ENST00000372542 AMER1Q5JTC6 1135 aaPredicted RBP31.97■■■□□ 2.71
SNX21-204ENST00000372542 FBXO31Q5XUX0 539 aaPredicted RBP31.96■■■□□ 2.71
SNX21-204ENST00000372542 ARHGEF28Q8N1W1 1705 aaKnown RBP31.95■■■□□ 2.71
SNX21-204ENST00000372542 TMEM132EQ6IEE7 984 aa31.94■■■□□ 2.7
SNX21-204ENST00000372542 SMG6Q86US8 1419 aaKnown RBP31.94■■■□□ 2.7
SNX21-204ENST00000372542 NUTM2DQ5VT03 806 aaPredicted RBP31.91■■■□□ 2.7
SNX21-204ENST00000372542 PUS7Q96PZ0 661 aaKnown RBP31.91■■■□□ 2.7
SNX21-204ENST00000372542 STAG3Q9UJ98 1225 aa31.86■■■□□ 2.69
SNX21-204ENST00000372542 ERICH6BQ5W0A0 696 aa31.85■■■□□ 2.69
SNX21-204ENST00000372542 PPP2R1AP30153 589 aa31.84■■■□□ 2.69
SNX21-204ENST00000372542 NUDCQ9Y266 331 aa31.84■■■□□ 2.69
SNX21-204ENST00000372542 MLECQ14165 292 aa31.84■■■□□ 2.69
SNX21-204ENST00000372542 ESF1Q9H501 851 aaKnown RBP31.84■■■□□ 2.69
SNX21-204ENST00000372542 A2ML1A8K2U0 1454 aa31.83■■■□□ 2.69
SNX21-204ENST00000372542 BLMP54132 1417 aaPredicted RBP31.82■■■□□ 2.68
SNX21-204ENST00000372542 EVC2Q86UK5 1308 aa31.81■■■□□ 2.68
SNX21-204ENST00000372542 BCANQ96GW7 911 aa31.8■■■□□ 2.68
SNX21-204ENST00000372542 ALKQ9UM73 1620 aa31.79■■■□□ 2.68
SNX21-204ENST00000372542 ZMYM3Q14202 1370 aa31.78■■■□□ 2.68
SNX21-204ENST00000372542 TULP4Q9NRJ4 1543 aa31.77■■■□□ 2.68
SNX21-204ENST00000372542 CARD14Q9BXL6 1004 aa31.77■■■□□ 2.68
SNX21-204ENST00000372542 YTHDC2Q9H6S0 1430 aaKnown RBP31.75■■■□□ 2.67
SNX21-204ENST00000372542 USP32Q8NFA0 1604 aa31.75■■■□□ 2.67
SNX21-204ENST00000372542 RIMS2Q9UQ26 1411 aa31.74■■■□□ 2.67
SNX21-204ENST00000372542 PDE3BQ13370 1112 aa31.74■■■□□ 2.67
SNX21-204ENST00000372542 PTPRMP28827 1452 aa31.74■■■□□ 2.67
SNX21-204ENST00000372542 NINLQ9Y2I6 1382 aa31.7■■■□□ 2.66
SNX21-204ENST00000372542 NSD3Q9BZ95 1437 aa31.69■■■□□ 2.66
SNX21-204ENST00000372542 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.68■■■□□ 2.66
SNX21-204ENST00000372542 WDR43Q15061 677 aaKnown RBP eCLIP31.68■■■□□ 2.66
SNX21-204ENST00000372542 SLC12A5Q9H2X9 1139 aa31.68■■■□□ 2.66
SNX21-204ENST00000372542 DLC1Q96QB1 1528 aa31.67■■■□□ 2.66
SNX21-204ENST00000372542 STK26Q9P289 416 aa31.67■■■□□ 2.66
SNX21-204ENST00000372542 ANKRD36BQ8N2N9 1353 aa31.65■■■□□ 2.66
SNX21-204ENST00000372542 TNRQ92752 1358 aa31.65■■■□□ 2.66
SNX21-204ENST00000372542 SETD1AO15047 1707 aaKnown RBP31.65■■■□□ 2.66
SNX21-204ENST00000372542 RNF123Q5XPI4 1314 aa31.64■■■□□ 2.66
SNX21-204ENST00000372542 HDGFP51858 240 aaKnown RBP31.62■■■□□ 2.65
SNX21-204ENST00000372542 ADAMTS8Q9UP79 889 aa31.62■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms