RNA–Protein interactions for RNA: ENST00000372067.7

VEGFA-205, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 3,535 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-205ENST00000372067 GPRASP1Q5JY77 1395 aa22.54■■□□□ 1.2
VEGFA-205ENST00000372067 CCDC146Q8IYE0 955 aa22.54■■□□□ 1.2
VEGFA-205ENST00000372067 STAC3Q96MF2 364 aa22.53■■□□□ 1.2
VEGFA-205ENST00000372067 ADAMTS8Q9UP79 889 aa22.52■■□□□ 1.19
VEGFA-205ENST00000372067 CFAP65Q6ZU64 1925 aaKnown RBP22.51■■□□□ 1.19
VEGFA-205ENST00000372067 SMG6Q86US8 1419 aaKnown RBP22.51■■□□□ 1.19
VEGFA-205ENST00000372067 COL17A1Q9UMD9 1497 aaPredicted RBP22.5■■□□□ 1.19
VEGFA-205ENST00000372067 PPP2R1AP30153 589 aa22.5■■□□□ 1.19
VEGFA-205ENST00000372067 PLPPR3Q6T4P5 718 aa22.5■■□□□ 1.19
VEGFA-205ENST00000372067 ZNF518AQ6AHZ1 1483 aa22.49■■□□□ 1.19
VEGFA-205ENST00000372067 UGGT1Q9NYU2 1555 aa22.49■■□□□ 1.19
VEGFA-205ENST00000372067 TRPM1Q7Z4N2 1603 aa22.49■■□□□ 1.19
VEGFA-205ENST00000372067 NEUROD2Q15784 382 aa22.48■■□□□ 1.19
VEGFA-205ENST00000372067 CENPJQ9HC77 1338 aaPredicted RBP22.48■■□□□ 1.19
VEGFA-205ENST00000372067 SCAF11Q99590 1463 aaKnown RBP22.47■■□□□ 1.19
VEGFA-205ENST00000372067 PLIN1O60240 522 aa22.47■■□□□ 1.19
VEGFA-205ENST00000372067 PARD3Q8TEW0 1356 aa22.47■■□□□ 1.19
VEGFA-205ENST00000372067 ESF1Q9H501 851 aaKnown RBP22.47■■□□□ 1.19
VEGFA-205ENST00000372067 EIF2AK4Q9P2K8 1649 aaKnown RBP22.47■■□□□ 1.19
VEGFA-205ENST00000372067 NOS1P29475 1434 aa22.46■■□□□ 1.19
VEGFA-205ENST00000372067 MORC1Q86VD1 984 aa22.45■■□□□ 1.19
VEGFA-205ENST00000372067 POLR1AO95602 1720 aaPredicted RBP22.44■■□□□ 1.18
VEGFA-205ENST00000372067 NOP58Q9Y2X3 529 aaKnown RBP22.44■■□□□ 1.18
VEGFA-205ENST00000372067 EXOC6Q8TAG9 804 aa22.43■■□□□ 1.18
VEGFA-205ENST00000372067 POGKQ9P215 609 aa22.43■■□□□ 1.18
VEGFA-205ENST00000372067 SRPK2P78362 688 aaKnown RBP22.43■■□□□ 1.18
VEGFA-205ENST00000372067 RRP1P56182 461 aaKnown RBP22.42■■□□□ 1.18
VEGFA-205ENST00000372067 SLC12A5Q9H2X9 1139 aa22.42■■□□□ 1.18
VEGFA-205ENST00000372067 MAGI2Q86UL8 1455 aa22.42■■□□□ 1.18
VEGFA-205ENST00000372067 E9PCH4 1651 aa22.42■■□□□ 1.18
VEGFA-205ENST00000372067 VGFO15240 615 aaPredicted RBP22.41■■□□□ 1.18
VEGFA-205ENST00000372067 PDE3BQ13370 1112 aa22.41■■□□□ 1.18
VEGFA-205ENST00000372067 ARAP3Q8WWN8 1544 aa22.41■■□□□ 1.18
VEGFA-205ENST00000372067 TRPM2O94759 1503 aa22.4■■□□□ 1.18
VEGFA-205ENST00000372067 PRDM15P57071 1507 aaPredicted RBP22.39■■□□□ 1.18
VEGFA-205ENST00000372067 PTPRTO14522 1441 aa22.39■■□□□ 1.18
VEGFA-205ENST00000372067 ABCA9Q8IUA7 1624 aa22.39■■□□□ 1.18
VEGFA-205ENST00000372067 PODXL2Q9NZ53 605 aa22.39■■□□□ 1.17
VEGFA-205ENST00000372067 CLTCL1P53675 1640 aa22.38■■□□□ 1.17
VEGFA-205ENST00000372067 AMER1Q5JTC6 1135 aaPredicted RBP22.38■■□□□ 1.17
VEGFA-205ENST00000372067 LRPPRCP42704 1394 aaKnown RBP22.37■■□□□ 1.17
VEGFA-205ENST00000372067 APAF1O14727 1248 aa22.37■■□□□ 1.17
VEGFA-205ENST00000372067 IDI1Q13907 227 aa22.37■■□□□ 1.17
VEGFA-205ENST00000372067 POGZQ7Z3K3 1410 aa22.36■■□□□ 1.17
VEGFA-205ENST00000372067 CANXP27824 592 aaKnown RBP22.36■■□□□ 1.17
VEGFA-205ENST00000372067 NPM2Q86SE8 214 aaKnown RBP22.35■■□□□ 1.17
VEGFA-205ENST00000372067 CABP2Q9NPB3 220 aa22.35■■□□□ 1.17
VEGFA-205ENST00000372067 FBXO31Q5XUX0 539 aaPredicted RBP22.35■■□□□ 1.17
VEGFA-205ENST00000372067 MINK1Q8N4C8 1332 aaPredicted RBP22.34■■□□□ 1.17
VEGFA-205ENST00000372067 GOLGA2Q08379 1002 aa22.33■■□□□ 1.16
VEGFA-205ENST00000372067 TET3O43151 1660 aa22.32■■□□□ 1.16
VEGFA-205ENST00000372067 NPATQ14207 1427 aa22.32■■□□□ 1.16
VEGFA-205ENST00000372067 RRP7AQ9Y3A4 280 aaKnown RBP22.32■■□□□ 1.16
VEGFA-205ENST00000372067 SPHKAPQ2M3C7 1700 aa22.31■■□□□ 1.16
VEGFA-205ENST00000372067 C14orf93Q9H972 538 aaKnown RBP22.31■■□□□ 1.16
VEGFA-205ENST00000372067 INO80Q9ULG1 1556 aaPredicted RBP22.31■■□□□ 1.16
VEGFA-205ENST00000372067 CARD14Q9BXL6 1004 aa22.3■■□□□ 1.16
VEGFA-205ENST00000372067 CFAP53Q96M91 514 aa22.29■■□□□ 1.16
VEGFA-205ENST00000372067 EVC2Q86UK5 1308 aa22.29■■□□□ 1.16
VEGFA-205ENST00000372067 DAXXQ9UER7 740 aaPredicted RBP22.28■■□□□ 1.16
VEGFA-205ENST00000372067 PPM1GO15355 546 aaPredicted RBP22.27■■□□□ 1.16
VEGFA-205ENST00000372067 CRBNQ96SW2 442 aa22.27■■□□□ 1.16
VEGFA-205ENST00000372067 MADDQ8WXG6 1647 aa22.27■■□□□ 1.16
VEGFA-205ENST00000372067 U2SURPO15042 1029 aaKnown RBP22.26■■□□□ 1.15
VEGFA-205ENST00000372067 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.26■■□□□ 1.15
VEGFA-205ENST00000372067 RPGRIP1LQ68CZ1 1315 aa22.25■■□□□ 1.15
VEGFA-205ENST00000372067 YEATS2Q9ULM3 1422 aa22.24■■□□□ 1.15
VEGFA-205ENST00000372067 KIDINS220Q9ULH0 1771 aa22.24■■□□□ 1.15
VEGFA-205ENST00000372067 NSD3Q9BZ95 1437 aa22.24■■□□□ 1.15
VEGFA-205ENST00000372067 SLC52A1Q9NWF4 448 aa22.23■■□□□ 1.15
VEGFA-205ENST00000372067 U2AF1L5P0DN76 240 aaPredicted RBP22.23■■□□□ 1.15
VEGFA-205ENST00000372067 U2AF1Q01081 240 aaKnown RBP eCLIP22.23■■□□□ 1.152e-10■□□□□ 9.4
VEGFA-205ENST00000372067 EFCAB6Q5THR3 1501 aa22.23■■□□□ 1.15
VEGFA-205ENST00000372067 CGNL1Q0VF96 1302 aa22.22■■□□□ 1.15
VEGFA-205ENST00000372067 ANP32AP39687 249 aaKnown RBP22.22■■□□□ 1.15
VEGFA-205ENST00000372067 ASXL1Q8IXJ9 1541 aa22.22■■□□□ 1.15
VEGFA-205ENST00000372067 PRAM1Q96QH2 718 aa22.22■■□□□ 1.15
VEGFA-205ENST00000372067 MLH3Q9UHC1 1453 aa22.21■■□□□ 1.15
VEGFA-205ENST00000372067 MTHFSP49914 203 aa22.21■■□□□ 1.15
VEGFA-205ENST00000372067 RTL5Q5HYW3 569 aaPredicted RBP22.2■■□□□ 1.15
VEGFA-205ENST00000372067 CEP152O94986 1710 aa22.2■■□□□ 1.14
VEGFA-205ENST00000372067 FRAT1Q92837 279 aaPredicted RBP22.2■■□□□ 1.14
VEGFA-205ENST00000372067 GGNBP2Q9H3C7 697 aa22.2■■□□□ 1.14
VEGFA-205ENST00000372067 BRPF3Q9ULD4 1205 aa22.2■■□□□ 1.14
VEGFA-205ENST00000372067 ZMYND15Q9H091 742 aa22.18■■□□□ 1.14
VEGFA-205ENST00000372067 KIF1BO60333 1816 aa22.18■■□□□ 1.14
VEGFA-205ENST00000372067 HECW2Q9P2P5 1572 aa22.18■■□□□ 1.14
VEGFA-205ENST00000372067 PPRC1Q5VV67 1664 aaKnown RBP22.17■■□□□ 1.14
VEGFA-205ENST00000372067 RNF17Q9BXT8 1623 aaKnown RBP22.17■■□□□ 1.14
VEGFA-205ENST00000372067 C20orf194Q5TEA3 1177 aa22.17■■□□□ 1.14
VEGFA-205ENST00000372067 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.17■■□□□ 1.14
VEGFA-205ENST00000372067 NEO1Q92859 1461 aa22.16■■□□□ 1.14
VEGFA-205ENST00000372067 LAMC1P11047 1609 aa22.16■■□□□ 1.14
VEGFA-205ENST00000372067 PLEKHH1Q9ULM0 1364 aa22.16■■□□□ 1.14
VEGFA-205ENST00000372067 ERVK-7P63135 1459 aa22.15■■□□□ 1.14
VEGFA-205ENST00000372067 DEPDC5O75140 1603 aa22.15■■□□□ 1.14
VEGFA-205ENST00000372067 RNF123Q5XPI4 1314 aa22.15■■□□□ 1.14
VEGFA-205ENST00000372067 CFAP74Q9C0B2 1584 aa22.14■■□□□ 1.13
VEGFA-205ENST00000372067 MAP3K4Q9Y6R4 1608 aa22.13■■□□□ 1.13
VEGFA-205ENST00000372067 MYOM2P54296 1465 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms