RNA–Protein interactions for RNA: ENST00000370263.8

CHRNA4-201, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA4, Length 5,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-201ENST00000370263 CLSTN1O94985 981 aa22■■□□□ 1.11
CHRNA4-201ENST00000370263 TPM1P09493 284 aa22■■□□□ 1.11
CHRNA4-201ENST00000370263 LNPKQ9C0E8 428 aa22■■□□□ 1.11
CHRNA4-201ENST00000370263 TSR1Q2NL82 804 aaKnown RBP21.99■■□□□ 1.11
CHRNA4-201ENST00000370263 CCDC70Q6NSX1 233 aa21.99■■□□□ 1.11
CHRNA4-201ENST00000370263 PANK1Q8TE04 598 aa21.99■■□□□ 1.11
CHRNA4-201ENST00000370263 HMGN5P82970 282 aaKnown RBP21.99■■□□□ 1.11
CHRNA4-201ENST00000370263 RUFY2Q8WXA3 655 aa21.99■■□□□ 1.11
CHRNA4-201ENST00000370263 UACAQ9BZF9 1416 aa21.99■■□□□ 1.11
CHRNA4-201ENST00000370263 API5Q9BZZ5 524 aaKnown RBP21.98■■□□□ 1.11
CHRNA4-201ENST00000370263 ZKSCAN1P17029 563 aaPredicted RBP21.98■■□□□ 1.11
CHRNA4-201ENST00000370263 MSH5O43196 834 aa21.98■■□□□ 1.11
CHRNA4-201ENST00000370263 BICD2Q8TD16 824 aa21.98■■□□□ 1.11
CHRNA4-201ENST00000370263 CHMP3Q9Y3E7 222 aa21.98■■□□□ 1.11
CHRNA4-201ENST00000370263 TPD52L1Q16890 204 aaPredicted RBP21.97■■□□□ 1.11
CHRNA4-201ENST00000370263 RBM10P98175 930 aaKnown RBP21.97■■□□□ 1.11
CHRNA4-201ENST00000370263 RNF214Q8ND24 703 aa21.97■■□□□ 1.11
CHRNA4-201ENST00000370263 SASS6Q6UVJ0 657 aa21.96■■□□□ 1.11
CHRNA4-201ENST00000370263 TRAK1Q9UPV9 953 aa21.96■■□□□ 1.11
CHRNA4-201ENST00000370263 CCDC66A2RUB6 948 aa21.96■■□□□ 1.11
CHRNA4-201ENST00000370263 CAVIN1Q6NZI2 390 aaKnown RBP21.96■■□□□ 1.11
CHRNA4-201ENST00000370263 RUNDC1Q96C34 613 aa21.96■■□□□ 1.11
CHRNA4-201ENST00000370263 ANO2Q9NQ90 1003 aa21.96■■□□□ 1.11
CHRNA4-201ENST00000370263 NOM1Q5C9Z4 860 aaKnown RBP21.96■■□□□ 1.11
CHRNA4-201ENST00000370263 MBD3O95983 291 aa21.95■■□□□ 1.1
CHRNA4-201ENST00000370263 SMC3Q9UQE7 1217 aa21.95■■□□□ 1.1
CHRNA4-201ENST00000370263 AKNAQ7Z591 1439 aa21.95■■□□□ 1.1
CHRNA4-201ENST00000370263 CDC45O75419 566 aa21.95■■□□□ 1.1
CHRNA4-201ENST00000370263 MNS1Q8NEH6 495 aa21.94■■□□□ 1.1
CHRNA4-201ENST00000370263 CDCA7LQ96GN5 454 aa21.94■■□□□ 1.1
CHRNA4-201ENST00000370263 KIF3BO15066 747 aa21.94■■□□□ 1.1
CHRNA4-201ENST00000370263 PES1O00541 588 aaKnown RBP21.93■■□□□ 1.1
CHRNA4-201ENST00000370263 GRPEL1Q9HAV7 217 aa21.93■■□□□ 1.1
CHRNA4-201ENST00000370263 TDRD9Q8NDG6 1382 aaKnown RBP21.93■■□□□ 1.1
CHRNA4-201ENST00000370263 ROCK1Q13464 1354 aa21.93■■□□□ 1.1
CHRNA4-201ENST00000370263 VPS37CA5D8V6 355 aaPredicted RBP21.92■■□□□ 1.1
CHRNA4-201ENST00000370263 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.92■■□□□ 1.1
CHRNA4-201ENST00000370263 SMARCA2P51531 1590 aa21.92■■□□□ 1.1
CHRNA4-201ENST00000370263 SMG6Q86US8 1419 aaKnown RBP21.91■■□□□ 1.1
CHRNA4-201ENST00000370263 LETM1O95202 739 aaPredicted RBP21.9■■□□□ 1.1
CHRNA4-201ENST00000370263 TAF7LQ5H9L4 462 aa21.9■■□□□ 1.1
CHRNA4-201ENST00000370263 ESPNB1AK53 854 aa21.9■■□□□ 1.1
CHRNA4-201ENST00000370263 TSPY26PQ9H489 355 aa21.89■■□□□ 1.09
CHRNA4-201ENST00000370263 RIPK4P57078 832 aa21.89■■□□□ 1.09
CHRNA4-201ENST00000370263 ADAMTS8Q9UP79 889 aa21.89■■□□□ 1.09
CHRNA4-201ENST00000370263 PDZRN3Q9UPQ7 1066 aa21.88■■□□□ 1.09
CHRNA4-201ENST00000370263 ACBD3Q9H3P7 528 aa21.88■■□□□ 1.09
CHRNA4-201ENST00000370263 MIA2Q96PC5 1412 aa21.87■■□□□ 1.09
CHRNA4-201ENST00000370263 CWC15Q9P013 229 aaKnown RBP21.86■■□□□ 1.09
CHRNA4-201ENST00000370263 PRPF40AO75400 957 aaKnown RBP21.86■■□□□ 1.09
CHRNA4-201ENST00000370263 IPO7O95373 1038 aaKnown RBP21.86■■□□□ 1.09
CHRNA4-201ENST00000370263 TOMM22Q9NS69 142 aa21.86■■□□□ 1.09
CHRNA4-201ENST00000370263 FGD6Q6ZV73 1430 aa21.86■■□□□ 1.09
CHRNA4-201ENST00000370263 RNF20Q5VTR2 975 aa21.86■■□□□ 1.09
CHRNA4-201ENST00000370263 PDE3AQ14432 1141 aa21.86■■□□□ 1.09
CHRNA4-201ENST00000370263 EVC2Q86UK5 1308 aa21.86■■□□□ 1.09
CHRNA4-201ENST00000370263 HSP90B2PQ58FF3 399 aa21.85■■□□□ 1.09
CHRNA4-201ENST00000370263 CCDC73Q6ZRK6 1079 aa21.85■■□□□ 1.09
CHRNA4-201ENST00000370263 ZNF330Q9Y3S2 320 aaPredicted RBP21.85■■□□□ 1.09
CHRNA4-201ENST00000370263 DIAPH1O60610 1272 aaKnown RBP21.84■■□□□ 1.09
CHRNA4-201ENST00000370263 AMPHP49418 695 aa21.84■■□□□ 1.09
CHRNA4-201ENST00000370263 CPLX2Q6PUV4 134 aaKnown RBP21.84■■□□□ 1.09
CHRNA4-201ENST00000370263 MLECQ14165 292 aa21.84■■□□□ 1.09
CHRNA4-201ENST00000370263 RABEP1Q15276 862 aa21.83■■□□□ 1.09
CHRNA4-201ENST00000370263 MCM4P33991 863 aa21.83■■□□□ 1.09
CHRNA4-201ENST00000370263 KIF21BO75037 1637 aa21.83■■□□□ 1.08
CHRNA4-201ENST00000370263 CEP89Q96ST8 783 aa21.82■■□□□ 1.08
CHRNA4-201ENST00000370263 HOOK1Q9UJC3 728 aaKnown RBP21.82■■□□□ 1.08
CHRNA4-201ENST00000370263 ANKRD20A12PQ8NF67 263 aa21.82■■□□□ 1.08
CHRNA4-201ENST00000370263 UQCRHLA0A096LP55 91 aa21.81■■□□□ 1.08
CHRNA4-201ENST00000370263 UQCRHP07919 91 aa21.81■■□□□ 1.08
CHRNA4-201ENST00000370263 NUTM2DQ5VT03 806 aaPredicted RBP21.81■■□□□ 1.08
CHRNA4-201ENST00000370263 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.81■■□□□ 1.08
CHRNA4-201ENST00000370263 TRIM5Q9C035 493 aa21.8■■□□□ 1.08
CHRNA4-201ENST00000370263 PODXL2Q9NZ53 605 aa21.8■■□□□ 1.08
CHRNA4-201ENST00000370263 MCM2P49736 904 aa21.8■■□□□ 1.08
CHRNA4-201ENST00000370263 NAT10Q9H0A0 1025 aaKnown RBP21.8■■□□□ 1.08
CHRNA4-201ENST00000370263 ERCC6Q03468 1493 aa21.8■■□□□ 1.08
CHRNA4-201ENST00000370263 IFIT2P09913 472 aaKnown RBP21.8■■□□□ 1.08
CHRNA4-201ENST00000370263 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.79■■□□□ 1.08
CHRNA4-201ENST00000370263 PNISRQ8TF01 805 aaKnown RBP21.79■■□□□ 1.08
CHRNA4-201ENST00000370263 TRIM29Q14134 588 aa21.79■■□□□ 1.08
CHRNA4-201ENST00000370263 GNAI1P63096 354 aa21.78■■□□□ 1.08
CHRNA4-201ENST00000370263 AK7Q96M32 723 aa21.78■■□□□ 1.08
CHRNA4-201ENST00000370263 BCL11BQ9C0K0 894 aaPredicted RBP21.78■■□□□ 1.08
CHRNA4-201ENST00000370263 PDE4CQ08493 712 aa21.78■■□□□ 1.08
CHRNA4-201ENST00000370263 CSB-PGBD3P0DP91 1061 aa21.78■■□□□ 1.08
CHRNA4-201ENST00000370263 AKAP17AQ02040 695 aaKnown RBP21.78■■□□□ 1.08
CHRNA4-201ENST00000370263 RRBP1Q9P2E9 1410 aaKnown RBP21.78■■□□□ 1.08
CHRNA4-201ENST00000370263 CPLX1O14810 134 aa21.77■■□□□ 1.08
CHRNA4-201ENST00000370263 COG3Q96JB2 828 aa21.77■■□□□ 1.08
CHRNA4-201ENST00000370263 CWC22Q9HCG8 908 aaKnown RBP21.77■■□□□ 1.08
CHRNA4-201ENST00000370263 MYOM3Q5VTT5 1437 aa21.77■■□□□ 1.08
CHRNA4-201ENST00000370263 CIZ1Q9ULV3 898 aaPredicted RBP21.77■■□□□ 1.08
CHRNA4-201ENST00000370263 LRRFIP1Q32MZ4 808 aaKnown RBP21.77■■□□□ 1.07
CHRNA4-201ENST00000370263 SYNE3Q6ZMZ3 975 aa21.76■■□□□ 1.07
CHRNA4-201ENST00000370263 FBXW7Q969H0 707 aa21.76■■□□□ 1.07
CHRNA4-201ENST00000370263 RUFY1Q96T51 708 aa21.76■■□□□ 1.07
CHRNA4-201ENST00000370263 LRRC9Q6ZRR7 1453 aa21.76■■□□□ 1.07
CHRNA4-201ENST00000370263 WASHC2CQ9Y4E1 1318 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms