RNA–Protein interactions for RNA: ENST00000369550.9

DKC1-201, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DKC1, Length 2,577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-201ENST00000369550 ARHGAP5Q13017 1502 aa21.78■■□□□ 1.08
DKC1-201ENST00000369550 RRAGDQ9NQL2 400 aaPredicted RBP21.77■■□□□ 1.08
DKC1-201ENST00000369550 CCDC144AA2RUR9 1427 aa21.77■■□□□ 1.08
DKC1-201ENST00000369550 ARXQ96QS3 562 aa21.77■■□□□ 1.08
DKC1-201ENST00000369550 TRPM1Q7Z4N2 1603 aa21.76■■□□□ 1.07
DKC1-201ENST00000369550 ERBINQ96RT1 1412 aa21.76■■□□□ 1.07
DKC1-201ENST00000369550 USP19O94966 1318 aa21.75■■□□□ 1.07
DKC1-201ENST00000369550 KNSTRNQ9Y448 316 aa21.75■■□□□ 1.07
DKC1-201ENST00000369550 ZNF521Q96K83 1311 aa21.75■■□□□ 1.07
DKC1-201ENST00000369550 SYCP2Q9BX26 1530 aa21.74■■□□□ 1.07
DKC1-201ENST00000369550 PPP2R1AP30153 589 aa21.74■■□□□ 1.07
DKC1-201ENST00000369550 SLFN5Q08AF3 891 aa21.74■■□□□ 1.07
DKC1-201ENST00000369550 EIF3AQ14152 1382 aaKnown RBP21.74■■□□□ 1.07
DKC1-201ENST00000369550 MAST1Q9Y2H9 1570 aa21.73■■□□□ 1.07
DKC1-201ENST00000369550 SEC24BO95487 1268 aa21.73■■□□□ 1.07
DKC1-201ENST00000369550 IGHDP01880 384 aa21.73■■□□□ 1.07
DKC1-201ENST00000369550 GPRASP1Q5JY77 1395 aa21.73■■□□□ 1.07
DKC1-201ENST00000369550 BCAR3O75815 825 aa21.72■■□□□ 1.07
DKC1-201ENST00000369550 CCDC146Q8IYE0 955 aa21.7■■□□□ 1.06
DKC1-201ENST00000369550 MAPK8IP3Q9UPT6 1336 aa21.7■■□□□ 1.06
DKC1-201ENST00000369550 GLIPR1L2Q4G1C9 344 aa21.69■■□□□ 1.06
DKC1-201ENST00000369550 UPF2Q9HAU5 1272 aaKnown RBP21.68■■□□□ 1.06
DKC1-201ENST00000369550 CANXP27824 592 aaKnown RBP21.68■■□□□ 1.06
DKC1-201ENST00000369550 PLCH2O75038 1416 aa21.67■■□□□ 1.06
DKC1-201ENST00000369550 NAP1L5Q96NT1 182 aaPredicted RBP21.67■■□□□ 1.06
DKC1-201ENST00000369550 NKTRP30414 1462 aaKnown RBP21.67■■□□□ 1.06
DKC1-201ENST00000369550 PRDM15P57071 1507 aaPredicted RBP21.66■■□□□ 1.06
DKC1-201ENST00000369550 FAM135AQ9P2D6 1515 aa21.66■■□□□ 1.06
DKC1-201ENST00000369550 SPINK5Q9NQ38 1064 aaPredicted RBP21.66■■□□□ 1.06
DKC1-201ENST00000369550 GOLGA6L3A6NEY3 463 aa21.66■■□□□ 1.06
DKC1-201ENST00000369550 CGNL1Q0VF96 1302 aa21.65■■□□□ 1.06
DKC1-201ENST00000369550 PLXNC1O60486 1568 aa21.65■■□□□ 1.06
DKC1-201ENST00000369550 A2MP01023 1474 aa21.64■■□□□ 1.06
DKC1-201ENST00000369550 APAF1O14727 1248 aa21.64■■□□□ 1.06
DKC1-201ENST00000369550 PNNQ9H307 717 aaKnown RBP21.64■■□□□ 1.06
DKC1-201ENST00000369550 TRMT2AQ8IZ69 625 aaKnown RBP21.64■■□□□ 1.05
DKC1-201ENST00000369550 CLUAP1Q96AJ1 413 aa21.64■■□□□ 1.05
DKC1-201ENST00000369550 ANTXR1Q9H6X2 564 aa21.64■■□□□ 1.05
DKC1-201ENST00000369550 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.63■■□□□ 1.054e-7■■■□□ 15.4
DKC1-201ENST00000369550 E9PSI1 815 aa21.62■■□□□ 1.05
DKC1-201ENST00000369550 XRCC6P12956 609 aaKnown RBP eCLIP21.62■■□□□ 1.054e-11■■■□□ 18.1
DKC1-201ENST00000369550 GZF1Q9H116 711 aaPredicted RBP21.62■■□□□ 1.05
DKC1-201ENST00000369550 COG6Q9Y2V7 657 aa21.62■■□□□ 1.05
DKC1-201ENST00000369550 MAGI2Q86UL8 1455 aa21.61■■□□□ 1.05
DKC1-201ENST00000369550 AMER1Q5JTC6 1135 aaPredicted RBP21.61■■□□□ 1.05
DKC1-201ENST00000369550 VIRMAQ69YN4 1812 aaKnown RBP21.6■■□□□ 1.05
DKC1-201ENST00000369550 UNC13BO14795 1591 aa21.6■■□□□ 1.05
DKC1-201ENST00000369550 PDE3AQ14432 1141 aa21.6■■□□□ 1.05
DKC1-201ENST00000369550 EFCAB2Q5VUJ9 269 aa21.6■■□□□ 1.05
DKC1-201ENST00000369550 PANK1Q8TE04 598 aa21.6■■□□□ 1.05
DKC1-201ENST00000369550 SPRYD3Q8NCJ5 442 aa21.59■■□□□ 1.05
DKC1-201ENST00000369550 PKNOX2Q96KN3 472 aa21.59■■□□□ 1.05
DKC1-201ENST00000369550 LAMC1P11047 1609 aa21.59■■□□□ 1.05
DKC1-201ENST00000369550 TBC1D2Q9BYX2 928 aa21.59■■□□□ 1.05
DKC1-201ENST00000369550 ABCC1P33527 1531 aa21.58■■□□□ 1.05
DKC1-201ENST00000369550 ARAP3Q8WWN8 1544 aa21.58■■□□□ 1.05
DKC1-201ENST00000369550 WDR7Q9Y4E6 1490 aa21.57■■□□□ 1.04
DKC1-201ENST00000369550 CENPJQ9HC77 1338 aaPredicted RBP21.57■■□□□ 1.04
DKC1-201ENST00000369550 PANK2Q9BZ23 570 aa21.57■■□□□ 1.04
DKC1-201ENST00000369550 NLRP1Q9C000 1473 aa21.57■■□□□ 1.04
DKC1-201ENST00000369550 TBC1D32Q96NH3 1257 aa21.56■■□□□ 1.04
DKC1-201ENST00000369550 DUOX2Q9NRD8 1548 aa21.56■■□□□ 1.04
DKC1-201ENST00000369550 EIF2AK4Q9P2K8 1649 aaKnown RBP21.55■■□□□ 1.04
DKC1-201ENST00000369550 CLCN1P35523 988 aa21.55■■□□□ 1.04
DKC1-201ENST00000369550 PLA2R1Q13018 1463 aa21.55■■□□□ 1.04
DKC1-201ENST00000369550 HSP90AA1P07900 732 aaKnown RBP21.54■■□□□ 1.04
DKC1-201ENST00000369550 MCM4P33991 863 aa21.54■■□□□ 1.04
DKC1-201ENST00000369550 FSD2A1L4K1 749 aa21.54■■□□□ 1.04
DKC1-201ENST00000369550 PIK3C2GO75747 1445 aa21.54■■□□□ 1.04
DKC1-201ENST00000369550 HSP90AA2PQ14568 343 aaPredicted RBP21.53■■□□□ 1.04
DKC1-201ENST00000369550 CDCA8Q53HL2 280 aa21.53■■□□□ 1.04
DKC1-201ENST00000369550 DMRT2Q9Y5R5 561 aa21.53■■□□□ 1.04
DKC1-201ENST00000369550 NINLQ9Y2I6 1382 aa21.52■■□□□ 1.04
DKC1-201ENST00000369550 VSIG10Q8N0Z9 540 aa21.52■■□□□ 1.04
DKC1-201ENST00000369550 PMFBP1Q8TBY8 1022 aa21.52■■□□□ 1.04
DKC1-201ENST00000369550 IQGAP3Q86VI3 1631 aa21.52■■□□□ 1.03
DKC1-201ENST00000369550 ASXL1Q8IXJ9 1541 aa21.5■■□□□ 1.03
DKC1-201ENST00000369550 TRAPPC8Q9Y2L5 1435 aa21.49■■□□□ 1.03
DKC1-201ENST00000369550 TRAK2O60296 914 aa21.48■■□□□ 1.03
DKC1-201ENST00000369550 MRE11P49959 708 aa21.47■■□□□ 1.03
DKC1-201ENST00000369550 RRP9O43818 475 aaKnown RBP21.47■■□□□ 1.03
DKC1-201ENST00000369550 PDZRN3Q9UPQ7 1066 aa21.47■■□□□ 1.03
DKC1-201ENST00000369550 ABCA9Q8IUA7 1624 aa21.47■■□□□ 1.03
DKC1-201ENST00000369550 CHMP5Q9NZZ3 219 aa21.46■■□□□ 1.03
DKC1-201ENST00000369550 RTEL1-TNFRSF6BF6WH68 1400 aa21.46■■□□□ 1.03
DKC1-201ENST00000369550 NGEFQ8N5V2 710 aa21.45■■□□□ 1.03
DKC1-201ENST00000369550 PCDHB15Q9Y5E8 787 aa21.45■■□□□ 1.03
DKC1-201ENST00000369550 MYH16Q9H6N6 1097 aa21.45■■□□□ 1.02
DKC1-201ENST00000369550 ZMYND15Q9H091 742 aa21.44■■□□□ 1.02
DKC1-201ENST00000369550 WWC1Q8IX03 1113 aa21.43■■□□□ 1.02
DKC1-201ENST00000369550 NEUROD2Q15784 382 aa21.43■■□□□ 1.02
DKC1-201ENST00000369550 OSCARQ8IYS5 282 aa21.43■■□□□ 1.02
DKC1-201ENST00000369550 SYNMO15061 1565 aa21.43■■□□□ 1.02
DKC1-201ENST00000369550 RWDD1Q9H446 243 aaPredicted RBP21.43■■□□□ 1.02
DKC1-201ENST00000369550 ZFYVE16Q7Z3T8 1539 aa21.42■■□□□ 1.02
DKC1-201ENST00000369550 SPAG9O60271 1321 aaKnown RBP21.42■■□□□ 1.02
DKC1-201ENST00000369550 AAMPQ13685 434 aa21.42■■□□□ 1.02
DKC1-201ENST00000369550 FANCAO15360 1455 aa21.42■■□□□ 1.02
DKC1-201ENST00000369550 GRPEL1Q9HAV7 217 aa21.42■■□□□ 1.02
DKC1-201ENST00000369550 C22orf23Q9BZE7 217 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms