RNA–Protein interactions for RNA: ENST00000369258.8

CHD1L-202, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1L, Length 2,967 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-202ENST00000369258 SLKQ9H2G2 1235 aaPredicted RBP16.79■□□□□ 0.28
CHD1L-202ENST00000369258 CFAP70Q5T0N1 1121 aa16.78■□□□□ 0.28
CHD1L-202ENST00000369258 NUTM2DQ5VT03 806 aaPredicted RBP16.78■□□□□ 0.28
CHD1L-202ENST00000369258 CCDC141Q6ZP82 1450 aa16.78■□□□□ 0.28
CHD1L-202ENST00000369258 ABCA8O94911 1581 aa16.78■□□□□ 0.28
CHD1L-202ENST00000369258 ARHGAP5Q13017 1502 aa16.78■□□□□ 0.28
CHD1L-202ENST00000369258 GPRASP1Q5JY77 1395 aa16.77■□□□□ 0.28
CHD1L-202ENST00000369258 CENPQQ7L2Z9 268 aaPredicted RBP16.77■□□□□ 0.28
CHD1L-202ENST00000369258 CHGAP10645 457 aaKnown RBP16.77■□□□□ 0.27
CHD1L-202ENST00000369258 GSE1Q14687 1217 aa16.75■□□□□ 0.27
CHD1L-202ENST00000369258 CANXP27824 592 aaKnown RBP16.75■□□□□ 0.27
CHD1L-202ENST00000369258 SLFN5Q08AF3 891 aa16.75■□□□□ 0.27
CHD1L-202ENST00000369258 FAM161AQ3B820 660 aa16.75■□□□□ 0.27
CHD1L-202ENST00000369258 CDC42BPBQ9Y5S2 1711 aa16.74■□□□□ 0.27
CHD1L-202ENST00000369258 CARD14Q9BXL6 1004 aa16.74■□□□□ 0.27
CHD1L-202ENST00000369258 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.74■□□□□ 0.27
CHD1L-202ENST00000369258 ZMYM4Q5VZL5 1548 aa16.74■□□□□ 0.27
CHD1L-202ENST00000369258 RSPH4AQ5TD94 716 aa16.73■□□□□ 0.27
CHD1L-202ENST00000369258 WDR7Q9Y4E6 1490 aa16.73■□□□□ 0.27
CHD1L-202ENST00000369258 TTC37Q6PGP7 1564 aa16.71■□□□□ 0.27
CHD1L-202ENST00000369258 NUP160Q12769 1436 aa16.71■□□□□ 0.27
CHD1L-202ENST00000369258 ARHGEF5Q12774 1597 aa16.71■□□□□ 0.27
CHD1L-202ENST00000369258 ZNF521Q96K83 1311 aa16.71■□□□□ 0.26
CHD1L-202ENST00000369258 SAFB2Q14151 953 aaKnown RBP eCLIP16.7■□□□□ 0.26
CHD1L-202ENST00000369258 PRDM15P57071 1507 aaPredicted RBP16.69■□□□□ 0.26
CHD1L-202ENST00000369258 EIF5BO60841 1220 aaKnown RBP16.69■□□□□ 0.26
CHD1L-202ENST00000369258 TMEM132EQ6IEE7 984 aa16.69■□□□□ 0.26
CHD1L-202ENST00000369258 MYO5CQ9NQX4 1742 aa16.69■□□□□ 0.26
CHD1L-202ENST00000369258 ADGRF5Q8IZF2 1346 aa16.69■□□□□ 0.26
CHD1L-202ENST00000369258 RLBP1P12271 317 aa16.68■□□□□ 0.26
CHD1L-202ENST00000369258 ERCC6L2Q5T890 1561 aa16.68■□□□□ 0.26
CHD1L-202ENST00000369258 POGKQ9P215 609 aa16.68■□□□□ 0.26
CHD1L-202ENST00000369258 TRAK1Q9UPV9 953 aa16.68■□□□□ 0.26
CHD1L-202ENST00000369258 KIF3BO15066 747 aa16.68■□□□□ 0.26
CHD1L-202ENST00000369258 TRAPPC8Q9Y2L5 1435 aa16.67■□□□□ 0.26
CHD1L-202ENST00000369258 SLC12A5Q9H2X9 1139 aa16.67■□□□□ 0.26
CHD1L-202ENST00000369258 PRKCSHP14314 528 aaPredicted RBP16.66■□□□□ 0.26
CHD1L-202ENST00000369258 USP19O94966 1318 aa16.64■□□□□ 0.26
CHD1L-202ENST00000369258 UGGT1Q9NYU2 1555 aa16.64■□□□□ 0.25
CHD1L-202ENST00000369258 PCDHB15Q9Y5E8 787 aa16.64■□□□□ 0.25
CHD1L-202ENST00000369258 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.64■□□□□ 0.25
CHD1L-202ENST00000369258 LAMC1P11047 1609 aa16.64■□□□□ 0.25
CHD1L-202ENST00000369258 WWC1Q8IX03 1113 aa16.63■□□□□ 0.25
CHD1L-202ENST00000369258 CDCA8Q53HL2 280 aa16.62■□□□□ 0.25
CHD1L-202ENST00000369258 EIF2AK4Q9P2K8 1649 aaKnown RBP16.62■□□□□ 0.25
CHD1L-202ENST00000369258 GZF1Q9H116 711 aaPredicted RBP16.62■□□□□ 0.25
CHD1L-202ENST00000369258 SPAG9O60271 1321 aaKnown RBP16.62■□□□□ 0.25
CHD1L-202ENST00000369258 CENPJQ9HC77 1338 aaPredicted RBP16.61■□□□□ 0.25
CHD1L-202ENST00000369258 CFAP65Q6ZU64 1925 aaKnown RBP16.61■□□□□ 0.25
CHD1L-202ENST00000369258 TSR2Q969E8 191 aaKnown RBP16.6■□□□□ 0.25
CHD1L-202ENST00000369258 PREX2Q70Z35 1606 aa16.59■□□□□ 0.25
CHD1L-202ENST00000369258 EFCAB2Q5VUJ9 269 aa16.59■□□□□ 0.25
CHD1L-202ENST00000369258 TRMT2AQ8IZ69 625 aaKnown RBP16.59■□□□□ 0.25
CHD1L-202ENST00000369258 TCP11L2Q8N4U5 519 aa16.59■□□□□ 0.25
CHD1L-202ENST00000369258 UNC13BO14795 1591 aa16.58■□□□□ 0.24
CHD1L-202ENST00000369258 NKTRP30414 1462 aaKnown RBP16.57■□□□□ 0.24
CHD1L-202ENST00000369258 MORC1Q86VD1 984 aa16.57■□□□□ 0.24
CHD1L-202ENST00000369258 E9PSI1 815 aa16.57■□□□□ 0.24
CHD1L-202ENST00000369258 EIF3AQ14152 1382 aaKnown RBP16.56■□□□□ 0.24
CHD1L-202ENST00000369258 FBLN1P23142 703 aa16.56■□□□□ 0.24
CHD1L-202ENST00000369258 MTHFSP49914 203 aa16.56■□□□□ 0.24
CHD1L-202ENST00000369258 ASXL1Q8IXJ9 1541 aa16.55■□□□□ 0.24
CHD1L-202ENST00000369258 PDZRN3Q9UPQ7 1066 aa16.54■□□□□ 0.24
CHD1L-202ENST00000369258 PIK3C2GO75747 1445 aa16.54■□□□□ 0.24
CHD1L-202ENST00000369258 ATP10AO60312 1499 aa16.54■□□□□ 0.24
CHD1L-202ENST00000369258 IQGAP3Q86VI3 1631 aa16.53■□□□□ 0.24
CHD1L-202ENST00000369258 RARSP54136 660 aaKnown RBP16.53■□□□□ 0.24
CHD1L-202ENST00000369258 GGT6Q6P531 493 aa16.53■□□□□ 0.24
CHD1L-202ENST00000369258 SCAF11Q99590 1463 aaKnown RBP16.53■□□□□ 0.24
CHD1L-202ENST00000369258 U2AF1L5P0DN76 240 aaPredicted RBP16.52■□□□□ 0.23
CHD1L-202ENST00000369258 U2AF1Q01081 240 aaKnown RBP eCLIP16.52■□□□□ 0.232e-6■■□□□ 13.9
CHD1L-202ENST00000369258 CGNL1Q0VF96 1302 aa16.52■□□□□ 0.23
CHD1L-202ENST00000369258 MAST1Q9Y2H9 1570 aa16.51■□□□□ 0.23
CHD1L-202ENST00000369258 SCAPERQ9BY12 1400 aa16.51■□□□□ 0.23
CHD1L-202ENST00000369258 U2SURPO15042 1029 aaKnown RBP16.51■□□□□ 0.23
CHD1L-202ENST00000369258 MFAP1P55081 439 aaKnown RBP16.51■□□□□ 0.23
CHD1L-202ENST00000369258 STK26Q9P289 416 aa16.51■□□□□ 0.23
CHD1L-202ENST00000369258 MADDQ8WXG6 1647 aa16.5■□□□□ 0.23
CHD1L-202ENST00000369258 CLASP1Q7Z460 1538 aa16.5■□□□□ 0.23
CHD1L-202ENST00000369258 DUOX2Q9NRD8 1548 aa16.5■□□□□ 0.23
CHD1L-202ENST00000369258 BECN1Q14457 450 aa16.5■□□□□ 0.23
CHD1L-202ENST00000369258 NSD3Q9BZ95 1437 aa16.5■□□□□ 0.23
CHD1L-202ENST00000369258 PDE3AQ14432 1141 aa16.5■□□□□ 0.23
CHD1L-202ENST00000369258 CABP2Q9NPB3 220 aa16.5■□□□□ 0.23
CHD1L-202ENST00000369258 NPC1L1Q9UHC9 1359 aa16.49■□□□□ 0.23
CHD1L-202ENST00000369258 MAPK8IP3Q9UPT6 1336 aa16.49■□□□□ 0.23
CHD1L-202ENST00000369258 TBC1D2Q9BYX2 928 aa16.49■□□□□ 0.23
CHD1L-202ENST00000369258 RNF17Q9BXT8 1623 aaKnown RBP16.49■□□□□ 0.23
CHD1L-202ENST00000369258 ERVK-7P63135 1459 aa16.48■□□□□ 0.23
CHD1L-202ENST00000369258 CLTCL1P53675 1640 aa16.48■□□□□ 0.23
CHD1L-202ENST00000369258 SYNMO15061 1565 aa16.48■□□□□ 0.23
CHD1L-202ENST00000369258 PANK2Q9BZ23 570 aa16.47■□□□□ 0.23
CHD1L-202ENST00000369258 FOXD4L1Q9NU39 408 aa16.47■□□□□ 0.23
CHD1L-202ENST00000369258 PLXNC1O60486 1568 aa16.47■□□□□ 0.23
CHD1L-202ENST00000369258 NGEFQ8N5V2 710 aa16.47■□□□□ 0.23
CHD1L-202ENST00000369258 GGNBP2Q9H3C7 697 aa16.47■□□□□ 0.23
CHD1L-202ENST00000369258 STAC3Q96MF2 364 aa16.46■□□□□ 0.23
CHD1L-202ENST00000369258 MYOM1P52179 1685 aa16.46■□□□□ 0.23
CHD1L-202ENST00000369258 ABCC2Q92887 1545 aa16.46■□□□□ 0.23
CHD1L-202ENST00000369258 PLCH2O75038 1416 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms