RNA–Protein interactions for RNA: ENST00000369068.4

RPRD2-202, Transcript of regulation of nuclear pre-mRNA domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPRD2, Length 4,612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD2-202ENST00000369068 RASSF8Q8NHQ8 419 aa13.05□□□□□ -0.32
RPRD2-202ENST00000369068 RUFY2Q8WXA3 655 aa13.05□□□□□ -0.32
RPRD2-202ENST00000369068 ELL2O00472 640 aaPredicted RBP13.05□□□□□ -0.32
RPRD2-202ENST00000369068 NPHP1O15259 732 aa13.05□□□□□ -0.32
RPRD2-202ENST00000369068 BICD2Q8TD16 824 aa13.04□□□□□ -0.32
RPRD2-202ENST00000369068 MNS1Q8NEH6 495 aa13.04□□□□□ -0.32
RPRD2-202ENST00000369068 BRD4O60885 1362 aaPredicted RBP13.04□□□□□ -0.32
RPRD2-202ENST00000369068 TPD52L1Q16890 204 aaPredicted RBP13.04□□□□□ -0.32
RPRD2-202ENST00000369068 GGT6Q6P531 493 aa13.04□□□□□ -0.32
RPRD2-202ENST00000369068 STAC3Q96MF2 364 aa13.04□□□□□ -0.32
RPRD2-202ENST00000369068 API5Q9BZZ5 524 aaKnown RBP13.04□□□□□ -0.32
RPRD2-202ENST00000369068 CADPSQ9ULU8 1353 aa13.03□□□□□ -0.32
RPRD2-202ENST00000369068 SASS6Q6UVJ0 657 aa13.03□□□□□ -0.32
RPRD2-202ENST00000369068 LNPKQ9C0E8 428 aa13.03□□□□□ -0.32
RPRD2-202ENST00000369068 RNF214Q8ND24 703 aa13.03□□□□□ -0.32
RPRD2-202ENST00000369068 ESPNB1AK53 854 aa13.03□□□□□ -0.32
RPRD2-202ENST00000369068 CLSTN1O94985 981 aa13.03□□□□□ -0.32
RPRD2-202ENST00000369068 CCDC144AA2RUR9 1427 aa13.02□□□□□ -0.32
RPRD2-202ENST00000369068 FHOD3Q2V2M9 1422 aa13.02□□□□□ -0.32
RPRD2-202ENST00000369068 CAVIN1Q6NZI2 390 aaKnown RBP13.02□□□□□ -0.32
RPRD2-202ENST00000369068 RBM10P98175 930 aaKnown RBP13.02□□□□□ -0.33
RPRD2-202ENST00000369068 ACBD3Q9H3P7 528 aa13.02□□□□□ -0.33
RPRD2-202ENST00000369068 ANO2Q9NQ90 1003 aa13.02□□□□□ -0.33
RPRD2-202ENST00000369068 SMC3Q9UQE7 1217 aa13.02□□□□□ -0.33
RPRD2-202ENST00000369068 WASHC2AQ641Q2 1341 aa13.02□□□□□ -0.33
RPRD2-202ENST00000369068 CHMP3Q9Y3E7 222 aa13.02□□□□□ -0.33
RPRD2-202ENST00000369068 IPO7O95373 1038 aaKnown RBP13.01□□□□□ -0.33
RPRD2-202ENST00000369068 HSP90B2PQ58FF3 399 aa13.01□□□□□ -0.33
RPRD2-202ENST00000369068 CWC15Q9P013 229 aaKnown RBP13.01□□□□□ -0.33
RPRD2-202ENST00000369068 PES1O00541 588 aaKnown RBP13.01□□□□□ -0.33
RPRD2-202ENST00000369068 GRPEL1Q9HAV7 217 aa13.01□□□□□ -0.33
RPRD2-202ENST00000369068 VPS37CA5D8V6 355 aaPredicted RBP13□□□□□ -0.33
RPRD2-202ENST00000369068 CDC45O75419 566 aa13□□□□□ -0.33
RPRD2-202ENST00000369068 MSH5O43196 834 aa13□□□□□ -0.33
RPRD2-202ENST00000369068 CPLX2Q6PUV4 134 aaKnown RBP13□□□□□ -0.33
RPRD2-202ENST00000369068 PANK1Q8TE04 598 aa13□□□□□ -0.33
RPRD2-202ENST00000369068 LETM1O95202 739 aaPredicted RBP13□□□□□ -0.33
RPRD2-202ENST00000369068 PODXL2Q9NZ53 605 aa13□□□□□ -0.33
RPRD2-202ENST00000369068 UACAQ9BZF9 1416 aa12.99□□□□□ -0.33
RPRD2-202ENST00000369068 RUNDC1Q96C34 613 aa12.99□□□□□ -0.33
RPRD2-202ENST00000369068 CEP89Q96ST8 783 aa12.98□□□□□ -0.33
RPRD2-202ENST00000369068 ROCK1Q13464 1354 aa12.98□□□□□ -0.33
RPRD2-202ENST00000369068 CCDC73Q6ZRK6 1079 aa12.98□□□□□ -0.33
RPRD2-202ENST00000369068 RNF20Q5VTR2 975 aa12.98□□□□□ -0.33
RPRD2-202ENST00000369068 TAF7LQ5H9L4 462 aa12.97□□□□□ -0.33
RPRD2-202ENST00000369068 TRAK1Q9UPV9 953 aa12.97□□□□□ -0.33
RPRD2-202ENST00000369068 TSPY26PQ9H489 355 aa12.97□□□□□ -0.33
RPRD2-202ENST00000369068 HNRNPMP52272 730 aaKnown RBP eCLIP12.97□□□□□ -0.333e-7■■■■□ 26.3
RPRD2-202ENST00000369068 PDE3AQ14432 1141 aa12.97□□□□□ -0.33
RPRD2-202ENST00000369068 ANKRD20A12PQ8NF67 263 aa12.97□□□□□ -0.33
RPRD2-202ENST00000369068 CDCA7LQ96GN5 454 aa12.97□□□□□ -0.33
RPRD2-202ENST00000369068 MCM4P33991 863 aa12.97□□□□□ -0.33
RPRD2-202ENST00000369068 WIZO95785 1651 aa12.96□□□□□ -0.33
RPRD2-202ENST00000369068 ATAD2BQ9ULI0 1458 aa12.96□□□□□ -0.33
RPRD2-202ENST00000369068 KIF3BO15066 747 aa12.96□□□□□ -0.34
RPRD2-202ENST00000369068 MCM2P49736 904 aa12.96□□□□□ -0.34
RPRD2-202ENST00000369068 HOOK1Q9UJC3 728 aaKnown RBP12.96□□□□□ -0.34
RPRD2-202ENST00000369068 PRPF40AO75400 957 aaKnown RBP12.95□□□□□ -0.34
RPRD2-202ENST00000369068 RABEP1Q15276 862 aa12.95□□□□□ -0.34
RPRD2-202ENST00000369068 TOMM22Q9NS69 142 aa12.95□□□□□ -0.34
RPRD2-202ENST00000369068 SMARCA4P51532 1647 aa12.95□□□□□ -0.34
RPRD2-202ENST00000369068 PDZRN3Q9UPQ7 1066 aa12.95□□□□□ -0.34
RPRD2-202ENST00000369068 AKNAQ7Z591 1439 aa12.95□□□□□ -0.34
RPRD2-202ENST00000369068 AK7Q96M32 723 aa12.95□□□□□ -0.34
RPRD2-202ENST00000369068 TRIM5Q9C035 493 aa12.95□□□□□ -0.34
RPRD2-202ENST00000369068 RIPK4P57078 832 aa12.94□□□□□ -0.34
RPRD2-202ENST00000369068 NAT10Q9H0A0 1025 aaKnown RBP12.94□□□□□ -0.34
RPRD2-202ENST00000369068 CIZ1Q9ULV3 898 aaPredicted RBP12.94□□□□□ -0.34
RPRD2-202ENST00000369068 ADAMTS8Q9UP79 889 aa12.94□□□□□ -0.34
RPRD2-202ENST00000369068 SMG6Q86US8 1419 aaKnown RBP12.94□□□□□ -0.34
RPRD2-202ENST00000369068 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.94□□□□□ -0.34
RPRD2-202ENST00000369068 UQCRHLA0A096LP55 91 aa12.93□□□□□ -0.34
RPRD2-202ENST00000369068 UQCRHP07919 91 aa12.93□□□□□ -0.34
RPRD2-202ENST00000369068 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.93□□□□□ -0.34
RPRD2-202ENST00000369068 RUSC2Q8N2Y8 1516 aa12.93□□□□□ -0.34
RPRD2-202ENST00000369068 RUFY1Q96T51 708 aa12.93□□□□□ -0.34
RPRD2-202ENST00000369068 LRRFIP1Q32MZ4 808 aaKnown RBP12.93□□□□□ -0.34
RPRD2-202ENST00000369068 ZSCAN30Q86W11 494 aa12.93□□□□□ -0.34
RPRD2-202ENST00000369068 CPLX1O14810 134 aa12.93□□□□□ -0.34
RPRD2-202ENST00000369068 CWC22Q9HCG8 908 aaKnown RBP12.93□□□□□ -0.34
RPRD2-202ENST00000369068 CDR1P51861 262 aa12.92□□□□□ -0.34
RPRD2-202ENST00000369068 AKAP17AQ02040 695 aaKnown RBP12.92□□□□□ -0.34
RPRD2-202ENST00000369068 EVC2Q86UK5 1308 aa12.92□□□□□ -0.34
RPRD2-202ENST00000369068 DIAPH1O60610 1272 aaKnown RBP12.92□□□□□ -0.34
RPRD2-202ENST00000369068 AMPHP49418 695 aa12.92□□□□□ -0.34
RPRD2-202ENST00000369068 TRIM29Q14134 588 aa12.92□□□□□ -0.34
RPRD2-202ENST00000369068 MIA2Q96PC5 1412 aa12.92□□□□□ -0.34
RPRD2-202ENST00000369068 ERCC4Q92889 916 aaPredicted RBP12.92□□□□□ -0.34
RPRD2-202ENST00000369068 ZNF330Q9Y3S2 320 aaPredicted RBP12.92□□□□□ -0.34
RPRD2-202ENST00000369068 SYNE3Q6ZMZ3 975 aa12.92□□□□□ -0.34
RPRD2-202ENST00000369068 IFIT2P09913 472 aaKnown RBP12.91□□□□□ -0.34
RPRD2-202ENST00000369068 CUX1P39880 1505 aa12.91□□□□□ -0.34
RPRD2-202ENST00000369068 WASHC2CQ9Y4E1 1318 aa12.91□□□□□ -0.34
RPRD2-202ENST00000369068 CALRP27797 417 aaKnown RBP12.9□□□□□ -0.34
RPRD2-202ENST00000369068 GNAI1P63096 354 aa12.9□□□□□ -0.34
RPRD2-202ENST00000369068 H0YHG0 523 aa12.9□□□□□ -0.34
RPRD2-202ENST00000369068 NEK4P51957 841 aa12.9□□□□□ -0.34
RPRD2-202ENST00000369068 PDE4CQ08493 712 aa12.9□□□□□ -0.34
RPRD2-202ENST00000369068 PNISRQ8TF01 805 aaKnown RBP12.9□□□□□ -0.34
RPRD2-202ENST00000369068 SDF4Q9BRK5 362 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms