RNA–Protein interactions for RNA: ENST00000368527.7

TPM3-209, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-209ENST00000368527 SYNMO15061 1565 aa13.72□□□□□ -0.21
TPM3-209ENST00000368527 RIMBP3CA6NJZ7 1639 aa13.72□□□□□ -0.21
TPM3-209ENST00000368527 RIMBP3BA6NNM3 1639 aa13.72□□□□□ -0.21
TPM3-209ENST00000368527 MROH1Q8NDA8 1641 aa13.72□□□□□ -0.21
TPM3-209ENST00000368527 RIMBP3Q9UFD9 1639 aa13.72□□□□□ -0.21
TPM3-209ENST00000368527 KIF3BO15066 747 aa13.71□□□□□ -0.21
TPM3-209ENST00000368527 POGZQ7Z3K3 1410 aa13.71□□□□□ -0.22
TPM3-209ENST00000368527 CD109Q6YHK3 1445 aa13.7□□□□□ -0.22
TPM3-209ENST00000368527 KIDINS220Q9ULH0 1771 aa13.7□□□□□ -0.22
TPM3-209ENST00000368527 DISP3Q9P2K9 1392 aa13.7□□□□□ -0.22
TPM3-209ENST00000368527 MAP3K4Q9Y6R4 1608 aa13.69□□□□□ -0.22
TPM3-209ENST00000368527 MYT1LQ9UL68 1186 aa13.69□□□□□ -0.22
TPM3-209ENST00000368527 SBNO2Q9Y2G9 1366 aa13.69□□□□□ -0.22
TPM3-209ENST00000368527 KIF1BO60333 1816 aa13.69□□□□□ -0.22
TPM3-209ENST00000368527 RPGRIP1LQ68CZ1 1315 aa13.68□□□□□ -0.22
TPM3-209ENST00000368527 HECW2Q9P2P5 1572 aa13.68□□□□□ -0.22
TPM3-209ENST00000368527 PIAS4Q8N2W9 510 aaPredicted RBP13.68□□□□□ -0.22
TPM3-209ENST00000368527 NRXN1Q9ULB1 1477 aa13.67□□□□□ -0.22
TPM3-209ENST00000368527 SETBP1Q9Y6X0 1596 aa13.67□□□□□ -0.22
TPM3-209ENST00000368527 BLMP54132 1417 aaPredicted RBP13.66□□□□□ -0.22
TPM3-209ENST00000368527 PANK3Q9H999 370 aa13.66□□□□□ -0.22
TPM3-209ENST00000368527 KNSTRNQ9Y448 316 aa13.66□□□□□ -0.22
TPM3-209ENST00000368527 ADGRB3O60242 1522 aa13.64□□□□□ -0.23
TPM3-209ENST00000368527 IFT172Q9UG01 1749 aa13.64□□□□□ -0.23
TPM3-209ENST00000368527 NGEFQ8N5V2 710 aa13.64□□□□□ -0.23
TPM3-209ENST00000368527 MYO3AQ8NEV4 1616 aa13.64□□□□□ -0.23
TPM3-209ENST00000368527 ASXL1Q8IXJ9 1541 aa13.64□□□□□ -0.23
TPM3-209ENST00000368527 PIK3C2GO75747 1445 aa13.64□□□□□ -0.23
TPM3-209ENST00000368527 KDM5AP29375 1690 aaKnown RBP13.63□□□□□ -0.23
TPM3-209ENST00000368527 PPRC1Q5VV67 1664 aaKnown RBP13.63□□□□□ -0.23
TPM3-209ENST00000368527 RBM19Q9Y4C8 960 aaKnown RBP13.62□□□□□ -0.23
TPM3-209ENST00000368527 ZC3H13Q5T200 1668 aaKnown RBP13.61□□□□□ -0.23
TPM3-209ENST00000368527 PUS7Q96PZ0 661 aaKnown RBP13.61□□□□□ -0.23
TPM3-209ENST00000368527 ARHGAP31Q2M1Z3 1444 aa13.61□□□□□ -0.23
TPM3-209ENST00000368527 FANCIQ9NVI1 1328 aa13.61□□□□□ -0.23
TPM3-209ENST00000368527 ABCA6Q8N139 1617 aa13.61□□□□□ -0.23
TPM3-209ENST00000368527 ABCC3O15438 1527 aa13.59□□□□□ -0.23
TPM3-209ENST00000368527 GLI2P10070 1586 aa13.58□□□□□ -0.23
TPM3-209ENST00000368527 FRMPD1Q5SYB0 1578 aa13.58□□□□□ -0.23
TPM3-209ENST00000368527 IRX6P78412 446 aaPredicted RBP13.57□□□□□ -0.24
TPM3-209ENST00000368527 WDR43Q15061 677 aaKnown RBP eCLIP13.57□□□□□ -0.24
TPM3-209ENST00000368527 AMER1Q5JTC6 1135 aaPredicted RBP13.57□□□□□ -0.24
TPM3-209ENST00000368527 CC2D1BQ5T0F9 858 aaKnown RBP13.57□□□□□ -0.24
TPM3-209ENST00000368527 NOS1P29475 1434 aa13.56□□□□□ -0.24
TPM3-209ENST00000368527 NPATQ14207 1427 aa13.56□□□□□ -0.24
TPM3-209ENST00000368527 CNGB1Q14028 1251 aaPredicted RBP13.56□□□□□ -0.24
TPM3-209ENST00000368527 RCAN3Q9UKA8 241 aa13.56□□□□□ -0.24
TPM3-209ENST00000368527 PPP2R1AP30153 589 aa13.55□□□□□ -0.24
TPM3-209ENST00000368527 RRP1P56182 461 aaKnown RBP13.55□□□□□ -0.24
TPM3-209ENST00000368527 CCDC136Q96JN2 1154 aa13.55□□□□□ -0.24
TPM3-209ENST00000368527 MYOM1P52179 1685 aa13.55□□□□□ -0.24
TPM3-209ENST00000368527 ZFYVE9O95405 1425 aa13.55□□□□□ -0.24
TPM3-209ENST00000368527 ERVK-7P63135 1459 aa13.55□□□□□ -0.24
TPM3-209ENST00000368527 CAMSAP1Q5T5Y3 1602 aa13.54□□□□□ -0.24
TPM3-209ENST00000368527 PPLO60437 1756 aa13.54□□□□□ -0.24
TPM3-209ENST00000368527 C14orf93Q9H972 538 aaKnown RBP13.54□□□□□ -0.24
TPM3-209ENST00000368527 CENPJQ9HC77 1338 aaPredicted RBP13.54□□□□□ -0.24
TPM3-209ENST00000368527 VGFO15240 615 aaPredicted RBP13.53□□□□□ -0.24
TPM3-209ENST00000368527 TRHP20396 242 aaPredicted RBP13.53□□□□□ -0.24
TPM3-209ENST00000368527 SLC52A1Q9NWF4 448 aa13.53□□□□□ -0.24
TPM3-209ENST00000368527 DIP2CQ9Y2E4 1556 aa13.53□□□□□ -0.24
TPM3-209ENST00000368527 PIK3C2BO00750 1634 aa13.53□□□□□ -0.24
TPM3-209ENST00000368527 MROH2AA6NES4 1674 aa13.53□□□□□ -0.24
TPM3-209ENST00000368527 CFAP70Q5T0N1 1121 aa13.52□□□□□ -0.25
TPM3-209ENST00000368527 ADGRF5Q8IZF2 1346 aa13.52□□□□□ -0.25
TPM3-209ENST00000368527 UGGT1Q9NYU2 1555 aa13.51□□□□□ -0.25
TPM3-209ENST00000368527 B4GALNT3Q6L9W6 998 aa13.51□□□□□ -0.25
TPM3-209ENST00000368527 ANP32EQ9BTT0 268 aa13.51□□□□□ -0.25
TPM3-209ENST00000368527 USP32Q8NFA0 1604 aa13.5□□□□□ -0.25
TPM3-209ENST00000368527 NINLQ9Y2I6 1382 aa13.5□□□□□ -0.25
TPM3-209ENST00000368527 RICTORQ6R327 1708 aa13.5□□□□□ -0.25
TPM3-209ENST00000368527 ADGRB1O14514 1584 aa13.49□□□□□ -0.25
TPM3-209ENST00000368527 NSD2O96028 1365 aa13.49□□□□□ -0.25
TPM3-209ENST00000368527 GGT6Q6P531 493 aa13.49□□□□□ -0.25
TPM3-209ENST00000368527 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.49□□□□□ -0.25
TPM3-209ENST00000368527 REREQ9P2R6 1566 aa13.49□□□□□ -0.25
TPM3-209ENST00000368527 NCBP3Q53F19 620 aaKnown RBP13.48□□□□□ -0.25
TPM3-209ENST00000368527 POLR3AO14802 1390 aaPredicted RBP13.47□□□□□ -0.25
TPM3-209ENST00000368527 MSH5O43196 834 aa13.47□□□□□ -0.25
TPM3-209ENST00000368527 ADAMTS8Q9UP79 889 aa13.46□□□□□ -0.25
TPM3-209ENST00000368527 EVC2Q86UK5 1308 aa13.45□□□□□ -0.26
TPM3-209ENST00000368527 NEXMIFQ5QGS0 1516 aa13.45□□□□□ -0.26
TPM3-209ENST00000368527 QRICH2Q9H0J4 1663 aa13.45□□□□□ -0.26
TPM3-209ENST00000368527 CHGAP10645 457 aaKnown RBP13.45□□□□□ -0.26
TPM3-209ENST00000368527 GOLGA2Q08379 1002 aa13.45□□□□□ -0.26
TPM3-209ENST00000368527 AGLP35573 1532 aa13.44□□□□□ -0.26
TPM3-209ENST00000368527 ZNF521Q96K83 1311 aa13.44□□□□□ -0.26
TPM3-209ENST00000368527 TCERG1O14776 1098 aaKnown RBP13.44□□□□□ -0.26
TPM3-209ENST00000368527 MS4A1P11836 297 aa13.44□□□□□ -0.26
TPM3-209ENST00000368527 CGNL1Q0VF96 1302 aa13.43□□□□□ -0.26
TPM3-209ENST00000368527 E9PSI1 815 aa13.41□□□□□ -0.26
TPM3-209ENST00000368527 ERICH6Q7L0X2 663 aa13.41□□□□□ -0.26
TPM3-209ENST00000368527 CFAP53Q96M91 514 aa13.41□□□□□ -0.26
TPM3-209ENST00000368527 RAPGEF3O95398 923 aa13.4□□□□□ -0.26
TPM3-209ENST00000368527 ANKRD36BQ8N2N9 1353 aa13.4□□□□□ -0.26
TPM3-209ENST00000368527 NSD3Q9BZ95 1437 aa13.39□□□□□ -0.27
TPM3-209ENST00000368527 SLFN5Q08AF3 891 aa13.39□□□□□ -0.27
TPM3-209ENST00000368527 MORC1Q86VD1 984 aa13.39□□□□□ -0.27
TPM3-209ENST00000368527 TRMT2AQ8IZ69 625 aaKnown RBP13.39□□□□□ -0.27
TPM3-209ENST00000368527 CARD14Q9BXL6 1004 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms