RNA–Protein interactions for RNA: ENST00000368408.3

EFNA3-201, Transcript of ephrin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNA3, Length 1,782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3-201ENST00000368408 SIGLEC1Q9BZZ2 1709 aa36.06■■■■□ 3.36
EFNA3-201ENST00000368408 SCAF11Q99590 1463 aaKnown RBP36.03■■■■□ 3.36
EFNA3-201ENST00000368408 SYNMO15061 1565 aa36.01■■■■□ 3.35
EFNA3-201ENST00000368408 RPGRIP1LQ68CZ1 1315 aa35.98■■■■□ 3.35
EFNA3-201ENST00000368408 PPLO60437 1756 aa35.97■■■■□ 3.35
EFNA3-201ENST00000368408 POLR3GLQ9BT43 218 aa35.97■■■■□ 3.35
EFNA3-201ENST00000368408 PPP6R1Q9UPN7 881 aa35.97■■■■□ 3.35
EFNA3-201ENST00000368408 CFAP65Q6ZU64 1925 aaKnown RBP35.95■■■■□ 3.35
EFNA3-201ENST00000368408 ADGRF5Q8IZF2 1346 aa35.94■■■■□ 3.34
EFNA3-201ENST00000368408 DISP3Q9P2K9 1392 aa35.93■■■■□ 3.34
EFNA3-201ENST00000368408 TMF1P82094 1093 aa35.92■■■■□ 3.34
EFNA3-201ENST00000368408 ARHGEF40Q8TER5 1519 aa35.9■■■■□ 3.34
EFNA3-201ENST00000368408 SETBP1Q9Y6X0 1596 aa35.9■■■■□ 3.34
EFNA3-201ENST00000368408 KTN1Q86UP2 1357 aaKnown RBP35.89■■■■□ 3.34
EFNA3-201ENST00000368408 EIF3AQ14152 1382 aaKnown RBP35.89■■■■□ 3.34
EFNA3-201ENST00000368408 PREX1Q8TCU6 1659 aa35.88■■■■□ 3.34
EFNA3-201ENST00000368408 SLC52A1Q9NWF4 448 aa35.87■■■■□ 3.33
EFNA3-201ENST00000368408 PIK3C2GO75747 1445 aa35.86■■■■□ 3.33
EFNA3-201ENST00000368408 CCDC184Q52MB2 194 aa35.84■■■■□ 3.33
EFNA3-201ENST00000368408 CFAP70Q5T0N1 1121 aa35.84■■■■□ 3.33
EFNA3-201ENST00000368408 CHGAP10645 457 aaKnown RBP35.81■■■■□ 3.32
EFNA3-201ENST00000368408 SLC24A1O60721 1099 aa35.8■■■■□ 3.32
EFNA3-201ENST00000368408 NEXMIFQ5QGS0 1516 aa35.8■■■■□ 3.32
EFNA3-201ENST00000368408 MRS2Q9HD23 443 aa35.79■■■■□ 3.32
EFNA3-201ENST00000368408 MYO3AQ8NEV4 1616 aa35.78■■■■□ 3.32
EFNA3-201ENST00000368408 ZFYVE9O95405 1425 aa35.77■■■■□ 3.32
EFNA3-201ENST00000368408 C14orf93Q9H972 538 aaKnown RBP35.77■■■■□ 3.32
EFNA3-201ENST00000368408 PER1O15534 1290 aaPredicted RBP35.76■■■■□ 3.32
EFNA3-201ENST00000368408 CDCA8Q53HL2 280 aa35.76■■■■□ 3.32
EFNA3-201ENST00000368408 ERVK-7P63135 1459 aa35.76■■■■□ 3.31
EFNA3-201ENST00000368408 IDI1Q13907 227 aa35.76■■■■□ 3.31
EFNA3-201ENST00000368408 RALBP1Q15311 655 aa35.76■■■■□ 3.31
EFNA3-201ENST00000368408 ADGRB1O14514 1584 aa35.73■■■■□ 3.31
EFNA3-201ENST00000368408 TMEM131LA2VDJ0 1609 aa35.73■■■■□ 3.31
EFNA3-201ENST00000368408 SBNO2Q9Y2G9 1366 aa35.71■■■■□ 3.31
EFNA3-201ENST00000368408 VGFO15240 615 aaPredicted RBP35.7■■■■□ 3.31
EFNA3-201ENST00000368408 CLTCQ00610 1675 aaKnown RBP35.69■■■■□ 3.3
EFNA3-201ENST00000368408 PARD3Q8TEW0 1356 aa35.67■■■■□ 3.3
EFNA3-201ENST00000368408 SPATA31D1Q6ZQQ2 1576 aa35.67■■■■□ 3.3
EFNA3-201ENST00000368408 MYBBP1AQ9BQG0 1328 aaKnown RBP35.65■■■■□ 3.3
EFNA3-201ENST00000368408 HNRNPUQ00839 825 aaKnown RBP eCLIP35.64■■■■□ 3.3
EFNA3-201ENST00000368408 BRD4O60885 1362 aaPredicted RBP35.63■■■■□ 3.3
EFNA3-201ENST00000368408 PANK3Q9H999 370 aa35.63■■■■□ 3.29
EFNA3-201ENST00000368408 KDM5AP29375 1690 aaKnown RBP35.62■■■■□ 3.29
EFNA3-201ENST00000368408 MYO5BQ9ULV0 1848 aa35.61■■■■□ 3.29
EFNA3-201ENST00000368408 FBXO31Q5XUX0 539 aaPredicted RBP35.6■■■■□ 3.29
EFNA3-201ENST00000368408 MYOM1P52179 1685 aa35.59■■■■□ 3.29
EFNA3-201ENST00000368408 FAM9BQ8IZU0 186 aa35.58■■■■□ 3.29
EFNA3-201ENST00000368408 CENPJQ9HC77 1338 aaPredicted RBP35.54■■■■□ 3.28
EFNA3-201ENST00000368408 PNISRQ8TF01 805 aaKnown RBP35.53■■■■□ 3.28
EFNA3-201ENST00000368408 NLRP13Q86W25 1043 aa35.5■■■■□ 3.27
EFNA3-201ENST00000368408 TMC1Q8TDI8 760 aa35.5■■■■□ 3.27
EFNA3-201ENST00000368408 ZBED9Q6R2W3 1325 aa35.49■■■■□ 3.27
EFNA3-201ENST00000368408 QRICH2Q9H0J4 1663 aa35.49■■■■□ 3.27
EFNA3-201ENST00000368408 LRPPRCP42704 1394 aaKnown RBP35.47■■■■□ 3.27
EFNA3-201ENST00000368408 CNGB1Q14028 1251 aaPredicted RBP35.47■■■■□ 3.27
EFNA3-201ENST00000368408 NPC1L1Q9UHC9 1359 aa35.47■■■■□ 3.27
EFNA3-201ENST00000368408 ARHGEF28Q8N1W1 1705 aaKnown RBP35.46■■■■□ 3.27
EFNA3-201ENST00000368408 TRAK1Q9UPV9 953 aa35.45■■■■□ 3.27
EFNA3-201ENST00000368408 A2ML1A8K2U0 1454 aa35.45■■■■□ 3.27
EFNA3-201ENST00000368408 ZMYM3Q14202 1370 aa35.44■■■■□ 3.26
EFNA3-201ENST00000368408 MLECQ14165 292 aa35.44■■■■□ 3.26
EFNA3-201ENST00000368408 TMEM132EQ6IEE7 984 aa35.44■■■■□ 3.26
EFNA3-201ENST00000368408 ASXL1Q8IXJ9 1541 aa35.43■■■■□ 3.26
EFNA3-201ENST00000368408 PUS7Q96PZ0 661 aaKnown RBP35.41■■■■□ 3.26
EFNA3-201ENST00000368408 KNSTRNQ9Y448 316 aa35.41■■■■□ 3.26
EFNA3-201ENST00000368408 NUTM2DQ5VT03 806 aaPredicted RBP35.41■■■■□ 3.26
EFNA3-201ENST00000368408 AMER1Q5JTC6 1135 aaPredicted RBP35.4■■■■□ 3.26
EFNA3-201ENST00000368408 ESF1Q9H501 851 aaKnown RBP35.38■■■■□ 3.25
EFNA3-201ENST00000368408 CC2D1BQ5T0F9 858 aaKnown RBP35.37■■■■□ 3.25
EFNA3-201ENST00000368408 SUPT16HQ9Y5B9 1047 aaKnown RBP35.36■■■■□ 3.25
EFNA3-201ENST00000368408 INSRP06213 1382 aa35.35■■■■□ 3.25
EFNA3-201ENST00000368408 ALKQ9UM73 1620 aa35.34■■■■□ 3.25
EFNA3-201ENST00000368408 STAG3Q9UJ98 1225 aa35.34■■■■□ 3.25
EFNA3-201ENST00000368408 RIMS2Q9UQ26 1411 aa35.32■■■■□ 3.24
EFNA3-201ENST00000368408 YTHDC2Q9H6S0 1430 aaKnown RBP35.27■■■■□ 3.24
EFNA3-201ENST00000368408 TNRQ92752 1358 aa35.27■■■■□ 3.24
EFNA3-201ENST00000368408 PTPRMP28827 1452 aa35.27■■■■□ 3.24
EFNA3-201ENST00000368408 TULP4Q9NRJ4 1543 aa35.26■■■■□ 3.24
EFNA3-201ENST00000368408 EVC2Q86UK5 1308 aa35.24■■■■□ 3.23
EFNA3-201ENST00000368408 SETD1AO15047 1707 aaKnown RBP35.23■■■■□ 3.23
EFNA3-201ENST00000368408 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.23■■■■□ 3.23
EFNA3-201ENST00000368408 CARD14Q9BXL6 1004 aa35.21■■■■□ 3.23
EFNA3-201ENST00000368408 DLC1Q96QB1 1528 aa35.2■■■■□ 3.23
EFNA3-201ENST00000368408 PPP2R1AP30153 589 aa35.2■■■■□ 3.23
EFNA3-201ENST00000368408 USP32Q8NFA0 1604 aa35.17■■■■□ 3.22
EFNA3-201ENST00000368408 NEFLP07196 543 aa35.17■■■■□ 3.22
EFNA3-201ENST00000368408 NRXN3Q9Y4C0 1643 aa35.15■■■■□ 3.22
EFNA3-201ENST00000368408 SMG6Q86US8 1419 aaKnown RBP35.15■■■■□ 3.22
EFNA3-201ENST00000368408 UBR1Q8IWV7 1749 aa35.15■■■■□ 3.22
EFNA3-201ENST00000368408 NINLQ9Y2I6 1382 aa35.14■■■■□ 3.22
EFNA3-201ENST00000368408 KDM4FA0A1W2PPD8 638 aa35.13■■■■□ 3.21
EFNA3-201ENST00000368408 HDGFP51858 240 aaKnown RBP35.13■■■■□ 3.21
EFNA3-201ENST00000368408 NLRP1Q9C000 1473 aa35.13■■■■□ 3.21
EFNA3-201ENST00000368408 BLMP54132 1417 aaPredicted RBP35.13■■■■□ 3.21
EFNA3-201ENST00000368408 FKBP8Q14318 412 aa35.12■■■■□ 3.21
EFNA3-201ENST00000368408 STK26Q9P289 416 aa35.12■■■■□ 3.21
EFNA3-201ENST00000368408 SLC12A5Q9H2X9 1139 aa35.1■■■■□ 3.21
EFNA3-201ENST00000368408 ABCC11Q96J66 1382 aa35.09■■■■□ 3.21
EFNA3-201ENST00000368408 NSD3Q9BZ95 1437 aa35.08■■■■□ 3.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms