RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 DEPDC5O75140 1603 aa24■■□□□ 1.43
UBQLN4-201ENST00000368309 ABCA9Q8IUA7 1624 aa23.99■■□□□ 1.43
UBQLN4-201ENST00000368309 TET3O43151 1660 aa23.99■■□□□ 1.43
UBQLN4-201ENST00000368309 INO80Q9ULG1 1556 aaPredicted RBP23.99■■□□□ 1.43
UBQLN4-201ENST00000368309 CEP152O94986 1710 aa23.98■■□□□ 1.43
UBQLN4-201ENST00000368309 IQGAP1P46940 1657 aa23.98■■□□□ 1.43
UBQLN4-201ENST00000368309 NPM1P06748 294 aaKnown RBP eCLIP23.97■■□□□ 1.43
UBQLN4-201ENST00000368309 EIF3AQ14152 1382 aaKnown RBP23.96■■□□□ 1.43
UBQLN4-201ENST00000368309 GGT6Q6P531 493 aa23.96■■□□□ 1.43
UBQLN4-201ENST00000368309 VWDEQ8N2E2 1590 aa23.95■■□□□ 1.43
UBQLN4-201ENST00000368309 INSRP06213 1382 aa23.93■■□□□ 1.42
UBQLN4-201ENST00000368309 CCDC146Q8IYE0 955 aa23.91■■□□□ 1.42
UBQLN4-201ENST00000368309 PLEKHH1Q9ULM0 1364 aa23.91■■□□□ 1.42
UBQLN4-201ENST00000368309 MROH1Q8NDA8 1641 aa23.91■■□□□ 1.42
UBQLN4-201ENST00000368309 CRBNQ96SW2 442 aa23.9■■□□□ 1.42
UBQLN4-201ENST00000368309 ASXL1Q8IXJ9 1541 aa23.89■■□□□ 1.42
UBQLN4-201ENST00000368309 CARD14Q9BXL6 1004 aa23.89■■□□□ 1.42
UBQLN4-201ENST00000368309 C20orf194Q5TEA3 1177 aa23.88■■□□□ 1.41
UBQLN4-201ENST00000368309 TRAK1Q9UPV9 953 aa23.87■■□□□ 1.41
UBQLN4-201ENST00000368309 SYNMO15061 1565 aa23.87■■□□□ 1.41
UBQLN4-201ENST00000368309 ZMYM4Q5VZL5 1548 aa23.87■■□□□ 1.41
UBQLN4-201ENST00000368309 DUSP27Q5VZP5 1158 aa23.86■■□□□ 1.41
UBQLN4-201ENST00000368309 OSCARQ8IYS5 282 aa23.85■■□□□ 1.41
UBQLN4-201ENST00000368309 KIDINS220Q9ULH0 1771 aa23.85■■□□□ 1.41
UBQLN4-201ENST00000368309 ZNF518AQ6AHZ1 1483 aa23.85■■□□□ 1.41
UBQLN4-201ENST00000368309 PAK3O75914 559 aaPredicted RBP23.85■■□□□ 1.41
UBQLN4-201ENST00000368309 NOS1P29475 1434 aa23.84■■□□□ 1.41
UBQLN4-201ENST00000368309 ERVK-7P63135 1459 aa23.84■■□□□ 1.41
UBQLN4-201ENST00000368309 GOLGA2Q08379 1002 aa23.84■■□□□ 1.41
UBQLN4-201ENST00000368309 TMEM132EQ6IEE7 984 aa23.84■■□□□ 1.41
UBQLN4-201ENST00000368309 CD109Q6YHK3 1445 aa23.84■■□□□ 1.41
UBQLN4-201ENST00000368309 EFCAB6Q5THR3 1501 aa23.84■■□□□ 1.41
UBQLN4-201ENST00000368309 MAP3K4Q9Y6R4 1608 aa23.84■■□□□ 1.41
UBQLN4-201ENST00000368309 SKAP1Q86WV1 359 aa23.83■■□□□ 1.41
UBQLN4-201ENST00000368309 NOP58Q9Y2X3 529 aaKnown RBP23.83■■□□□ 1.41
UBQLN4-201ENST00000368309 APAF1O14727 1248 aa23.82■■□□□ 1.4
UBQLN4-201ENST00000368309 ANP32AP39687 249 aaKnown RBP23.82■■□□□ 1.4
UBQLN4-201ENST00000368309 MYOM2P54296 1465 aa23.82■■□□□ 1.4
UBQLN4-201ENST00000368309 NUTM2DQ5VT03 806 aaPredicted RBP23.82■■□□□ 1.4
UBQLN4-201ENST00000368309 ABCA6Q8N139 1617 aa23.82■■□□□ 1.4
UBQLN4-201ENST00000368309 SLC24A1O60721 1099 aa23.81■■□□□ 1.4
UBQLN4-201ENST00000368309 PPRC1Q5VV67 1664 aaKnown RBP23.81■■□□□ 1.4
UBQLN4-201ENST00000368309 CFAP65Q6ZU64 1925 aaKnown RBP23.81■■□□□ 1.4
UBQLN4-201ENST00000368309 PIK3C2GO75747 1445 aa23.81■■□□□ 1.4
UBQLN4-201ENST00000368309 NPC1L1Q9UHC9 1359 aa23.81■■□□□ 1.4
UBQLN4-201ENST00000368309 ZNF521Q96K83 1311 aa23.81■■□□□ 1.4
UBQLN4-201ENST00000368309 CENPJQ9HC77 1338 aaPredicted RBP23.8■■□□□ 1.4
UBQLN4-201ENST00000368309 RAPGEF3O95398 923 aa23.8■■□□□ 1.4
UBQLN4-201ENST00000368309 MYOM1P52179 1685 aa23.8■■□□□ 1.4
UBQLN4-201ENST00000368309 TCERG1O14776 1098 aaKnown RBP23.79■■□□□ 1.4
UBQLN4-201ENST00000368309 NPATQ14207 1427 aa23.79■■□□□ 1.4
UBQLN4-201ENST00000368309 TNNT2P45379 298 aaPredicted RBP23.78■■□□□ 1.4
UBQLN4-201ENST00000368309 NPM2Q86SE8 214 aaKnown RBP23.78■■□□□ 1.4
UBQLN4-201ENST00000368309 SENP3Q9H4L4 574 aaPredicted RBP23.78■■□□□ 1.4
UBQLN4-201ENST00000368309 SPINK5Q9NQ38 1064 aaPredicted RBP23.78■■□□□ 1.4
UBQLN4-201ENST00000368309 KIF1BO60333 1816 aa23.78■■□□□ 1.4
UBQLN4-201ENST00000368309 SLC12A5Q9H2X9 1139 aa23.78■■□□□ 1.4
UBQLN4-201ENST00000368309 KIAA1210Q9ULL0 1709 aa23.78■■□□□ 1.4
UBQLN4-201ENST00000368309 KDM5AP29375 1690 aaKnown RBP23.77■■□□□ 1.4
UBQLN4-201ENST00000368309 IPO9Q96P70 1041 aaKnown RBP23.77■■□□□ 1.4
UBQLN4-201ENST00000368309 SLFN5Q08AF3 891 aa23.76■■□□□ 1.39
UBQLN4-201ENST00000368309 NEURL4Q96JN8 1562 aa23.76■■□□□ 1.39
UBQLN4-201ENST00000368309 MROH2AA6NES4 1674 aa23.76■■□□□ 1.39
UBQLN4-201ENST00000368309 PDE4AP27815 886 aa23.76■■□□□ 1.39
UBQLN4-201ENST00000368309 C14orf93Q9H972 538 aaKnown RBP23.76■■□□□ 1.39
UBQLN4-201ENST00000368309 POGZQ7Z3K3 1410 aa23.74■■□□□ 1.39
UBQLN4-201ENST00000368309 LMTK2Q8IWU2 1503 aa23.73■■□□□ 1.39
UBQLN4-201ENST00000368309 NRXN1Q9ULB1 1477 aa23.72■■□□□ 1.39
UBQLN4-201ENST00000368309 DMRT2Q9Y5R5 561 aa23.71■■□□□ 1.39
UBQLN4-201ENST00000368309 MORC1Q86VD1 984 aa23.7■■□□□ 1.38
UBQLN4-201ENST00000368309 ZBTB47Q9UFB7 747 aaPredicted RBP23.7■■□□□ 1.38
UBQLN4-201ENST00000368309 NBR1Q14596 966 aa23.7■■□□□ 1.38
UBQLN4-201ENST00000368309 BACH2Q9BYV9 841 aa23.69■■□□□ 1.38
UBQLN4-201ENST00000368309 ADGRB3O60242 1522 aa23.69■■□□□ 1.38
UBQLN4-201ENST00000368309 FRMPD1Q5SYB0 1578 aa23.69■■□□□ 1.38
UBQLN4-201ENST00000368309 MLH3Q9UHC1 1453 aa23.69■■□□□ 1.38
UBQLN4-201ENST00000368309 SBNO2Q9Y2G9 1366 aa23.68■■□□□ 1.38
UBQLN4-201ENST00000368309 NSD3Q9BZ95 1437 aa23.67■■□□□ 1.38
UBQLN4-201ENST00000368309 TRMT2AQ8IZ69 625 aaKnown RBP23.67■■□□□ 1.38
UBQLN4-201ENST00000368309 IFT172Q9UG01 1749 aa23.67■■□□□ 1.38
UBQLN4-201ENST00000368309 BCAR3O75815 825 aa23.67■■□□□ 1.38
UBQLN4-201ENST00000368309 MS4A1P11836 297 aa23.66■■□□□ 1.38
UBQLN4-201ENST00000368309 NEUROD2Q15784 382 aa23.66■■□□□ 1.38
UBQLN4-201ENST00000368309 SAFB2Q14151 953 aaKnown RBP eCLIP23.66■■□□□ 1.38
UBQLN4-201ENST00000368309 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.66■■□□□ 1.38
UBQLN4-201ENST00000368309 RPGRIP1LQ68CZ1 1315 aa23.64■■□□□ 1.37
UBQLN4-201ENST00000368309 E9PSI1 815 aa23.63■■□□□ 1.37
UBQLN4-201ENST00000368309 RRP7AQ9Y3A4 280 aaKnown RBP23.62■■□□□ 1.37
UBQLN4-201ENST00000368309 HECW2Q9P2P5 1572 aa23.61■■□□□ 1.37
UBQLN4-201ENST00000368309 IDI1Q13907 227 aa23.61■■□□□ 1.37
UBQLN4-201ENST00000368309 VGFO15240 615 aaPredicted RBP23.61■■□□□ 1.37
UBQLN4-201ENST00000368309 ABCC3O15438 1527 aa23.61■■□□□ 1.37
UBQLN4-201ENST00000368309 KDM2BQ8NHM5 1336 aa23.6■■□□□ 1.37
UBQLN4-201ENST00000368309 POLR3AO14802 1390 aaPredicted RBP23.6■■□□□ 1.37
UBQLN4-201ENST00000368309 STK26Q9P289 416 aa23.6■■□□□ 1.37
UBQLN4-201ENST00000368309 WWC1Q8IX03 1113 aa23.6■■□□□ 1.37
UBQLN4-201ENST00000368309 ADGRB1O14514 1584 aa23.59■■□□□ 1.37
UBQLN4-201ENST00000368309 SETBP1Q9Y6X0 1596 aa23.59■■□□□ 1.37
UBQLN4-201ENST00000368309 CABP2Q9NPB3 220 aa23.59■■□□□ 1.37
UBQLN4-201ENST00000368309 MTHFSP49914 203 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms