RNA–Protein interactions for RNA: ENST00000368262.7

CCT3-206, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 2

Gene CCT3, Length 2,048 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-206ENST00000368262 FAM43AQ8N2R8 423 aa18.28■□□□□ 0.52
CCT3-206ENST00000368262 MYOM1P52179 1685 aa18.28■□□□□ 0.52
CCT3-206ENST00000368262 MADDQ8WXG6 1647 aa18.28■□□□□ 0.52
CCT3-206ENST00000368262 GOLGA2Q08379 1002 aa18.28■□□□□ 0.52
CCT3-206ENST00000368262 RSPH4AQ5TD94 716 aa18.28■□□□□ 0.52
CCT3-206ENST00000368262 PPP2R1AP30153 589 aa18.27■□□□□ 0.52
CCT3-206ENST00000368262 NPC1L1Q9UHC9 1359 aa18.27■□□□□ 0.52
CCT3-206ENST00000368262 FRAT2O75474 233 aaPredicted RBP18.27■□□□□ 0.51
CCT3-206ENST00000368262 SLFN5Q08AF3 891 aa18.27■□□□□ 0.51
CCT3-206ENST00000368262 ASXL1Q8IXJ9 1541 aa18.26■□□□□ 0.51
CCT3-206ENST00000368262 UBE2Q2Q8WVN8 375 aa18.25■□□□□ 0.51
CCT3-206ENST00000368262 NKTRP30414 1462 aaKnown RBP18.24■□□□□ 0.51
CCT3-206ENST00000368262 HNRNPMP52272 730 aaKnown RBP eCLIP18.24■□□□□ 0.51
CCT3-206ENST00000368262 SPHKAPQ2M3C7 1700 aa18.24■□□□□ 0.51
CCT3-206ENST00000368262 USP19O94966 1318 aa18.24■□□□□ 0.51
CCT3-206ENST00000368262 WDR43Q15061 677 aaKnown RBP eCLIP18.23■□□□□ 0.51
CCT3-206ENST00000368262 AMER1Q5JTC6 1135 aaPredicted RBP18.23■□□□□ 0.51
CCT3-206ENST00000368262 NINLQ9Y2I6 1382 aa18.23■□□□□ 0.51
CCT3-206ENST00000368262 NLRP1Q9C000 1473 aa18.22■□□□□ 0.51
CCT3-206ENST00000368262 SYCP2Q9BX26 1530 aa18.21■□□□□ 0.51
CCT3-206ENST00000368262 DUOX2Q9NRD8 1548 aa18.21■□□□□ 0.51
CCT3-206ENST00000368262 RSPH6AQ9H0K4 717 aa18.21■□□□□ 0.51
CCT3-206ENST00000368262 ZMYM3Q14202 1370 aa18.2■□□□□ 0.5
CCT3-206ENST00000368262 SCAPERQ9BY12 1400 aa18.19■□□□□ 0.5
CCT3-206ENST00000368262 RGL3Q3MIN7 710 aa18.19■□□□□ 0.5
CCT3-206ENST00000368262 JPH4Q96JJ6 628 aa18.19■□□□□ 0.5
CCT3-206ENST00000368262 CEP152O94986 1710 aa18.19■□□□□ 0.5
CCT3-206ENST00000368262 KIAA1210Q9ULL0 1709 aa18.19■□□□□ 0.5
CCT3-206ENST00000368262 NGEFQ8N5V2 710 aa18.18■□□□□ 0.5
CCT3-206ENST00000368262 KDM5AP29375 1690 aaKnown RBP18.18■□□□□ 0.5
CCT3-206ENST00000368262 RGS3P49796 1198 aa18.18■□□□□ 0.5
CCT3-206ENST00000368262 KNSTRNQ9Y448 316 aa18.18■□□□□ 0.5
CCT3-206ENST00000368262 MAPK8IP3Q9UPT6 1336 aa18.17■□□□□ 0.5
CCT3-206ENST00000368262 CGNL1Q0VF96 1302 aa18.16■□□□□ 0.5
CCT3-206ENST00000368262 SCAF11Q99590 1463 aaKnown RBP18.16■□□□□ 0.5
CCT3-206ENST00000368262 PDE3AQ14432 1141 aa18.15■□□□□ 0.5
CCT3-206ENST00000368262 CDCA8Q53HL2 280 aa18.15■□□□□ 0.5
CCT3-206ENST00000368262 TTC37Q6PGP7 1564 aa18.15■□□□□ 0.5
CCT3-206ENST00000368262 CHMP7Q8WUX9 453 aaPredicted RBP18.14■□□□□ 0.49
CCT3-206ENST00000368262 E9PSI1 815 aa18.13■□□□□ 0.49
CCT3-206ENST00000368262 BECN1Q14457 450 aa18.13■□□□□ 0.49
CCT3-206ENST00000368262 TRPM2O94759 1503 aa18.12■□□□□ 0.49
CCT3-206ENST00000368262 IGHDP01880 384 aa18.11■□□□□ 0.49
CCT3-206ENST00000368262 ERCC6Q03468 1493 aa18.11■□□□□ 0.49
CCT3-206ENST00000368262 L1TD1Q5T7N2 865 aaKnown RBP18.11■□□□□ 0.49
CCT3-206ENST00000368262 SPINK5Q9NQ38 1064 aaPredicted RBP18.11■□□□□ 0.49
CCT3-206ENST00000368262 ARHGAP5Q13017 1502 aa18.1■□□□□ 0.49
CCT3-206ENST00000368262 ANTXR1Q9H6X2 564 aa18.1■□□□□ 0.49
CCT3-206ENST00000368262 NEURL4Q96JN8 1562 aa18.1■□□□□ 0.49
CCT3-206ENST00000368262 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.1■□□□□ 0.49
CCT3-206ENST00000368262 AAMPQ13685 434 aa18.1■□□□□ 0.49
CCT3-206ENST00000368262 STAC3Q96MF2 364 aa18.1■□□□□ 0.49
CCT3-206ENST00000368262 POGKQ9P215 609 aa18.1■□□□□ 0.49
CCT3-206ENST00000368262 BCAR3O75815 825 aa18.08■□□□□ 0.49
CCT3-206ENST00000368262 CLUAP1Q96AJ1 413 aa18.08■□□□□ 0.48
CCT3-206ENST00000368262 SHPRHQ149N8 1683 aa18.07■□□□□ 0.48
CCT3-206ENST00000368262 APAF1O14727 1248 aa18.06■□□□□ 0.48
CCT3-206ENST00000368262 SEC24BO95487 1268 aa18.06■□□□□ 0.48
CCT3-206ENST00000368262 CLTCL1P53675 1640 aa18.06■□□□□ 0.48
CCT3-206ENST00000368262 SHROOM2Q13796 1616 aa18.05■□□□□ 0.48
CCT3-206ENST00000368262 CCDC146Q8IYE0 955 aa18.05■□□□□ 0.48
CCT3-206ENST00000368262 PTPRTO14522 1441 aa18.04■□□□□ 0.48
CCT3-206ENST00000368262 MYO3AQ8NEV4 1616 aa18.04■□□□□ 0.48
CCT3-206ENST00000368262 TBC1D32Q96NH3 1257 aa18.03■□□□□ 0.48
CCT3-206ENST00000368262 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.03■□□□□ 0.481e-8■■□□□ 13.3
CCT3-206ENST00000368262 DEPDC5O75140 1603 aa18.03■□□□□ 0.48
CCT3-206ENST00000368262 CENPJQ9HC77 1338 aaPredicted RBP18.03■□□□□ 0.48
CCT3-206ENST00000368262 POLR3AO14802 1390 aaPredicted RBP18.02■□□□□ 0.48
CCT3-206ENST00000368262 IQSEC2Q5JU85 1478 aa18.02■□□□□ 0.48
CCT3-206ENST00000368262 RRAGDQ9NQL2 400 aaPredicted RBP18.02■□□□□ 0.48
CCT3-206ENST00000368262 ERVK-7P63135 1459 aa18.01■□□□□ 0.47
CCT3-206ENST00000368262 EIF5BO60841 1220 aaKnown RBP18.01■□□□□ 0.47
CCT3-206ENST00000368262 DMRT2Q9Y5R5 561 aa18.01■□□□□ 0.47
CCT3-206ENST00000368262 TET3O43151 1660 aa18.01■□□□□ 0.47
CCT3-206ENST00000368262 FSD2A1L4K1 749 aa18.01■□□□□ 0.47
CCT3-206ENST00000368262 PMFBP1Q8TBY8 1022 aa18.01■□□□□ 0.47
CCT3-206ENST00000368262 SLC24A1O60721 1099 aa17.98■□□□□ 0.47
CCT3-206ENST00000368262 ABCC1P33527 1531 aa17.98■□□□□ 0.47
CCT3-206ENST00000368262 IFT172Q9UG01 1749 aa17.98■□□□□ 0.47
CCT3-206ENST00000368262 ABCA6Q8N139 1617 aa17.98■□□□□ 0.47
CCT3-206ENST00000368262 MAP3K4Q9Y6R4 1608 aa17.97■□□□□ 0.47
CCT3-206ENST00000368262 MYOM2P54296 1465 aa17.97■□□□□ 0.47
CCT3-206ENST00000368262 RTEL1-TNFRSF6BF6WH68 1400 aa17.97■□□□□ 0.47
CCT3-206ENST00000368262 PANK1Q8TE04 598 aa17.97■□□□□ 0.47
CCT3-206ENST00000368262 TBC1D2Q9BYX2 928 aa17.97■□□□□ 0.47
CCT3-206ENST00000368262 SLKQ9H2G2 1235 aaPredicted RBP17.97■□□□□ 0.47
CCT3-206ENST00000368262 COG6Q9Y2V7 657 aa17.97■□□□□ 0.47
CCT3-206ENST00000368262 WWC1Q8IX03 1113 aa17.96■□□□□ 0.47
CCT3-206ENST00000368262 UPF2Q9HAU5 1272 aaKnown RBP17.96■□□□□ 0.47
CCT3-206ENST00000368262 USP32Q8NFA0 1604 aa17.96■□□□□ 0.47
CCT3-206ENST00000368262 KANK1Q14678 1352 aa17.96■□□□□ 0.47
CCT3-206ENST00000368262 PHF23Q9BUL5 403 aaPredicted RBP17.96■□□□□ 0.47
CCT3-206ENST00000368262 VWDEQ8N2E2 1590 aa17.96■□□□□ 0.47
CCT3-206ENST00000368262 SBNO2Q9Y2G9 1366 aa17.94■□□□□ 0.46
CCT3-206ENST00000368262 RARSP54136 660 aaKnown RBP17.94■□□□□ 0.46
CCT3-206ENST00000368262 ZC3H13Q5T200 1668 aaKnown RBP17.93■□□□□ 0.46
CCT3-206ENST00000368262 FBLN2P98095 1184 aa17.93■□□□□ 0.46
CCT3-206ENST00000368262 XRCC6P12956 609 aaKnown RBP eCLIP17.93■□□□□ 0.462e-6■□□□□ 9.4
CCT3-206ENST00000368262 CANXP27824 592 aaKnown RBP17.93■□□□□ 0.46
CCT3-206ENST00000368262 MCM4P33991 863 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms