RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 PRAG1Q86YV5 1406 aa17.07■□□□□ 0.32
USF1-203ENST00000368021 PIK3C2BO00750 1634 aa17.06■□□□□ 0.32
USF1-203ENST00000368021 SCAF1Q9H7N4 1312 aaKnown RBP17.06■□□□□ 0.32
USF1-203ENST00000368021 STRCQ7RTU9 1775 aa17.05■□□□□ 0.32
USF1-203ENST00000368021 DIEXFQ68CQ4 756 aaKnown RBP17.04■□□□□ 0.32
USF1-203ENST00000368021 ANKLE2Q86XL3 938 aa17.04■□□□□ 0.32
USF1-203ENST00000368021 KDM2AQ9Y2K7 1162 aa17.04■□□□□ 0.32
USF1-203ENST00000368021 ADGRB3O60242 1522 aa17.04■□□□□ 0.32
USF1-203ENST00000368021 EIF4G2P78344 907 aaKnown RBP eCLIP17.03■□□□□ 0.32
USF1-203ENST00000368021 SENP3Q9H4L4 574 aaPredicted RBP17.03■□□□□ 0.32
USF1-203ENST00000368021 DMRT2Q9Y5R5 561 aa17.03■□□□□ 0.32
USF1-203ENST00000368021 ZNF326Q5BKZ1 582 aaKnown RBP17.02■□□□□ 0.31
USF1-203ENST00000368021 TRPM1Q7Z4N2 1603 aa17.01■□□□□ 0.31
USF1-203ENST00000368021 TXNDC2Q86VQ3 553 aa17■□□□□ 0.31
USF1-203ENST00000368021 UBR1Q8IWV7 1749 aa17■□□□□ 0.31
USF1-203ENST00000368021 LTKP29376 864 aa17■□□□□ 0.31
USF1-203ENST00000368021 MYOM2P54296 1465 aa16.99■□□□□ 0.31
USF1-203ENST00000368021 NUTM2DQ5VT03 806 aaPredicted RBP16.99■□□□□ 0.31
USF1-203ENST00000368021 IFT172Q9UG01 1749 aa16.99■□□□□ 0.31
USF1-203ENST00000368021 HSPA5P11021 654 aaKnown RBP16.98■□□□□ 0.31
USF1-203ENST00000368021 GPRASP1Q5JY77 1395 aa16.98■□□□□ 0.31
USF1-203ENST00000368021 EID1Q9Y6B2 187 aa16.98■□□□□ 0.31
USF1-203ENST00000368021 TMEM2Q9UHN6 1383 aa16.97■□□□□ 0.31
USF1-203ENST00000368021 RPGRIP1LQ68CZ1 1315 aa16.97■□□□□ 0.31
USF1-203ENST00000368021 LAMC1P11047 1609 aa16.97■□□□□ 0.31
USF1-203ENST00000368021 ROCK2O75116 1388 aaKnown RBP16.96■□□□□ 0.31
USF1-203ENST00000368021 USP47Q96K76 1375 aa16.95■□□□□ 0.3
USF1-203ENST00000368021 CARD11Q9BXL7 1154 aa16.95■□□□□ 0.3
USF1-203ENST00000368021 NRXN1Q9ULB1 1477 aa16.95■□□□□ 0.3
USF1-203ENST00000368021 BCANQ96GW7 911 aa16.94■□□□□ 0.3
USF1-203ENST00000368021 HIRIP3Q9BW71 556 aaPredicted RBP16.94■□□□□ 0.3
USF1-203ENST00000368021 PPLO60437 1756 aa16.94■□□□□ 0.3
USF1-203ENST00000368021 KIAA1210Q9ULL0 1709 aa16.93■□□□□ 0.3
USF1-203ENST00000368021 SCAF11Q99590 1463 aaKnown RBP16.93■□□□□ 0.3
USF1-203ENST00000368021 TMEM131LA2VDJ0 1609 aa16.93■□□□□ 0.3
USF1-203ENST00000368021 MYO5BQ9ULV0 1848 aa16.93■□□□□ 0.3
USF1-203ENST00000368021 SLIT1O75093 1534 aa16.92■□□□□ 0.3
USF1-203ENST00000368021 NPHP4O75161 1426 aaPredicted RBP16.92■□□□□ 0.3
USF1-203ENST00000368021 ARHGAP23Q9P227 1491 aa16.92■□□□□ 0.3
USF1-203ENST00000368021 ZNF335Q9H4Z2 1342 aaPredicted RBP16.91■□□□□ 0.3
USF1-203ENST00000368021 POLR1AO95602 1720 aaPredicted RBP16.91■□□□□ 0.3
USF1-203ENST00000368021 RIMS2Q9UQ26 1411 aa16.9■□□□□ 0.3
USF1-203ENST00000368021 HDGFP51858 240 aaKnown RBP16.89■□□□□ 0.29
USF1-203ENST00000368021 NBPF1Q3BBV0 1214 aa16.89■□□□□ 0.29
USF1-203ENST00000368021 SLC26A8Q96RN1 970 aa16.89■□□□□ 0.29
USF1-203ENST00000368021 NEXMIFQ5QGS0 1516 aa16.89■□□□□ 0.29
USF1-203ENST00000368021 KDM5AP29375 1690 aaKnown RBP16.89■□□□□ 0.29
USF1-203ENST00000368021 ZFYVE9O95405 1425 aa16.88■□□□□ 0.29
USF1-203ENST00000368021 ADGRF5Q8IZF2 1346 aa16.88■□□□□ 0.29
USF1-203ENST00000368021 MED14O60244 1454 aa16.88■□□□□ 0.29
USF1-203ENST00000368021 PIK3C2GO75747 1445 aa16.87■□□□□ 0.29
USF1-203ENST00000368021 VGFO15240 615 aaPredicted RBP16.86■□□□□ 0.29
USF1-203ENST00000368021 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.86■□□□□ 0.29
USF1-203ENST00000368021 IQGAP1P46940 1657 aa16.86■□□□□ 0.29
USF1-203ENST00000368021 WASHC2AQ641Q2 1341 aa16.85■□□□□ 0.29
USF1-203ENST00000368021 SETBP1Q9Y6X0 1596 aa16.84■□□□□ 0.29
USF1-203ENST00000368021 CCDC7Q96M83 1385 aa16.83■□□□□ 0.28
USF1-203ENST00000368021 ST20-MTHFSA0A0A6YYL1 179 aa16.82■□□□□ 0.28
USF1-203ENST00000368021 DDX10Q13206 875 aaKnown RBP16.82■□□□□ 0.28
USF1-203ENST00000368021 CERKQ8TCT0 537 aa16.82■□□□□ 0.28
USF1-203ENST00000368021 C14orf93Q9H972 538 aaKnown RBP16.81■□□□□ 0.28
USF1-203ENST00000368021 PLEKHG1Q9ULL1 1385 aa16.8■□□□□ 0.28
USF1-203ENST00000368021 C11orf95C9JLR9 678 aaPredicted RBP16.8■□□□□ 0.28
USF1-203ENST00000368021 CFAP70Q5T0N1 1121 aa16.8■□□□□ 0.28
USF1-203ENST00000368021 KIF7Q2M1P5 1343 aa16.79■□□□□ 0.28
USF1-203ENST00000368021 LTBP4Q8N2S1 1624 aa16.78■□□□□ 0.28
USF1-203ENST00000368021 CENPBP07199 599 aaPredicted RBP16.78■□□□□ 0.28
USF1-203ENST00000368021 EIF3AQ14152 1382 aaKnown RBP16.78■□□□□ 0.28
USF1-203ENST00000368021 ADGRB1O14514 1584 aa16.77■□□□□ 0.28
USF1-203ENST00000368021 RBM33Q96EV2 1170 aaKnown RBP16.77■□□□□ 0.27
USF1-203ENST00000368021 TESK2Q96S53 571 aa16.76■□□□□ 0.27
USF1-203ENST00000368021 MIER1Q8N108 512 aa16.75■□□□□ 0.27
USF1-203ENST00000368021 TBX22Q9Y458 520 aa16.75■□□□□ 0.27
USF1-203ENST00000368021 ADAMTS13Q76LX8 1427 aa16.75■□□□□ 0.27
USF1-203ENST00000368021 SLC24A1O60721 1099 aa16.73■□□□□ 0.27
USF1-203ENST00000368021 KCNA6P17658 529 aa16.73■□□□□ 0.27
USF1-203ENST00000368021 STRCP1A6NGW2 1772 aa16.72■□□□□ 0.27
USF1-203ENST00000368021 PROSER2Q86WR7 435 aaPredicted RBP16.7■□□□□ 0.26
USF1-203ENST00000368021 METP08581 1390 aa16.7■□□□□ 0.26
USF1-203ENST00000368021 SBNO2Q9Y2G9 1366 aa16.7■□□□□ 0.26
USF1-203ENST00000368021 TMF1P82094 1093 aa16.7■□□□□ 0.26
USF1-203ENST00000368021 AMOTL2Q9Y2J4 779 aa16.7■□□□□ 0.26
USF1-203ENST00000368021 ALKQ9UM73 1620 aa16.69■□□□□ 0.26
USF1-203ENST00000368021 CPS1P31327 1500 aa16.69■□□□□ 0.26
USF1-203ENST00000368021 NRXN3Q9Y4C0 1643 aa16.69■□□□□ 0.26
USF1-203ENST00000368021 ILDR1Q86SU0 546 aaPredicted RBP16.68■□□□□ 0.26
USF1-203ENST00000368021 ASXL1Q8IXJ9 1541 aa16.68■□□□□ 0.26
USF1-203ENST00000368021 ERICH6Q7L0X2 663 aa16.68■□□□□ 0.26
USF1-203ENST00000368021 DISP3Q9P2K9 1392 aa16.67■□□□□ 0.26
USF1-203ENST00000368021 LRRC7Q96NW7 1537 aa16.67■□□□□ 0.26
USF1-203ENST00000368021 TMEM132EQ6IEE7 984 aa16.67■□□□□ 0.26
USF1-203ENST00000368021 UBAP1LF5GYI3 381 aa16.66■□□□□ 0.26
USF1-203ENST00000368021 FBXO41Q8TF61 875 aa16.66■□□□□ 0.26
USF1-203ENST00000368021 PTPRUQ92729 1446 aa16.66■□□□□ 0.26
USF1-203ENST00000368021 SETD1AO15047 1707 aaKnown RBP16.66■□□□□ 0.26
USF1-203ENST00000368021 TMEM94Q12767 1356 aa16.66■□□□□ 0.26
USF1-203ENST00000368021 CDCA8Q53HL2 280 aa16.66■□□□□ 0.26
USF1-203ENST00000368021 CENPJQ9HC77 1338 aaPredicted RBP16.65■□□□□ 0.26
USF1-203ENST00000368021 ANP32CO43423 234 aa16.65■□□□□ 0.26
USF1-203ENST00000368021 ARHGEF28Q8N1W1 1705 aaKnown RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms