RNA–Protein interactions for RNA: ENST00000366744.5

MRPL55-216, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-216ENST00000366744 DIP2AQ14689 1571 aa13.9□□□□□ -0.18
MRPL55-216ENST00000366744 RIMS2Q9UQ26 1411 aa13.9□□□□□ -0.19
MRPL55-216ENST00000366744 BCANQ96GW7 911 aa13.89□□□□□ -0.19
MRPL55-216ENST00000366744 SLC4A1APQ9BWU0 796 aaKnown RBP13.89□□□□□ -0.19
MRPL55-216ENST00000366744 ZFYVE9O95405 1425 aa13.88□□□□□ -0.19
MRPL55-216ENST00000366744 SETD5Q9C0A6 1442 aa13.88□□□□□ -0.19
MRPL55-216ENST00000366744 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.87□□□□□ -0.19
MRPL55-216ENST00000366744 LTKP29376 864 aa13.86□□□□□ -0.19
MRPL55-216ENST00000366744 NWD1Q149M9 1564 aa13.86□□□□□ -0.19
MRPL55-216ENST00000366744 CHD2O14647 1828 aaKnown RBP13.85□□□□□ -0.19
MRPL55-216ENST00000366744 PLEKHG1Q9ULL1 1385 aa13.85□□□□□ -0.19
MRPL55-216ENST00000366744 PPLO60437 1756 aa13.85□□□□□ -0.19
MRPL55-216ENST00000366744 ZNF326Q5BKZ1 582 aaKnown RBP13.84□□□□□ -0.19
MRPL55-216ENST00000366744 XIRP1Q702N8 1843 aaKnown RBP13.84□□□□□ -0.19
MRPL55-216ENST00000366744 NKTRP30414 1462 aaKnown RBP13.84□□□□□ -0.19
MRPL55-216ENST00000366744 CCDC144AA2RUR9 1427 aa13.83□□□□□ -0.2
MRPL55-216ENST00000366744 RAB3GAP2Q9H2M9 1393 aa13.83□□□□□ -0.2
MRPL55-216ENST00000366744 NEXMIFQ5QGS0 1516 aa13.82□□□□□ -0.2
MRPL55-216ENST00000366744 LRRC7Q96NW7 1537 aa13.81□□□□□ -0.2
MRPL55-216ENST00000366744 SETBP1Q9Y6X0 1596 aa13.81□□□□□ -0.2
MRPL55-216ENST00000366744 IFT172Q9UG01 1749 aa13.81□□□□□ -0.2
MRPL55-216ENST00000366744 UBAP1LF5GYI3 381 aa13.8□□□□□ -0.2
MRPL55-216ENST00000366744 NRXN3Q9Y4C0 1643 aa13.79□□□□□ -0.2
MRPL55-216ENST00000366744 SLC26A8Q96RN1 970 aa13.79□□□□□ -0.2
MRPL55-216ENST00000366744 TOM1O60784 492 aa13.78□□□□□ -0.2
MRPL55-216ENST00000366744 MPHOSPH9Q99550 1183 aa13.78□□□□□ -0.2
MRPL55-216ENST00000366744 SENP3Q9H4L4 574 aaPredicted RBP13.78□□□□□ -0.2
MRPL55-216ENST00000366744 SCAF1Q9H7N4 1312 aaKnown RBP13.78□□□□□ -0.2
MRPL55-216ENST00000366744 NUTM2DQ5VT03 806 aaPredicted RBP13.77□□□□□ -0.21
MRPL55-216ENST00000366744 XRN1Q8IZH2 1706 aaKnown RBP13.76□□□□□ -0.21
MRPL55-216ENST00000366744 PIK3R4Q99570 1358 aa13.76□□□□□ -0.21
MRPL55-216ENST00000366744 KCNA6P17658 529 aa13.75□□□□□ -0.21
MRPL55-216ENST00000366744 ADAMTS13Q76LX8 1427 aa13.74□□□□□ -0.21
MRPL55-216ENST00000366744 SETD1AO15047 1707 aaKnown RBP13.74□□□□□ -0.21
MRPL55-216ENST00000366744 FOXD1Q16676 465 aa13.74□□□□□ -0.21
MRPL55-216ENST00000366744 LAMC1P11047 1609 aa13.74□□□□□ -0.21
MRPL55-216ENST00000366744 RPGRIP1LQ68CZ1 1315 aa13.73□□□□□ -0.21
MRPL55-216ENST00000366744 MSH6P52701 1360 aa13.72□□□□□ -0.21
MRPL55-216ENST00000366744 TMEM94Q12767 1356 aa13.72□□□□□ -0.21
MRPL55-216ENST00000366744 PIP4K2BP78356 416 aa13.72□□□□□ -0.21
MRPL55-216ENST00000366744 TBX22Q9Y458 520 aa13.72□□□□□ -0.21
MRPL55-216ENST00000366744 VGFO15240 615 aaPredicted RBP13.71□□□□□ -0.21
MRPL55-216ENST00000366744 C14orf37Q86TY3 774 aa13.71□□□□□ -0.21
MRPL55-216ENST00000366744 PROSER2Q86WR7 435 aaPredicted RBP13.71□□□□□ -0.21
MRPL55-216ENST00000366744 ANKRD30BQ9BXX2 1392 aa13.7□□□□□ -0.22
MRPL55-216ENST00000366744 ALKQ9UM73 1620 aa13.69□□□□□ -0.22
MRPL55-216ENST00000366744 SPATA31E1Q6ZUB1 1445 aa13.69□□□□□ -0.22
MRPL55-216ENST00000366744 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.69□□□□□ -0.22
MRPL55-216ENST00000366744 ROBO1Q9Y6N7 1651 aa13.69□□□□□ -0.22
MRPL55-216ENST00000366744 NALCNQ8IZF0 1738 aa13.68□□□□□ -0.22
MRPL55-216ENST00000366744 HRCP23327 699 aa13.68□□□□□ -0.22
MRPL55-216ENST00000366744 KNDC1Q76NI1 1749 aa13.67□□□□□ -0.22
MRPL55-216ENST00000366744 NCOA3Q9Y6Q9 1424 aa13.67□□□□□ -0.22
MRPL55-216ENST00000366744 MYOM2P54296 1465 aa13.67□□□□□ -0.22
MRPL55-216ENST00000366744 RGL3Q3MIN7 710 aa13.65□□□□□ -0.22
MRPL55-216ENST00000366744 PTCH1Q13635 1447 aa13.64□□□□□ -0.23
MRPL55-216ENST00000366744 PHLPP1O60346 1717 aa13.64□□□□□ -0.23
MRPL55-216ENST00000366744 AMOTL2Q9Y2J4 779 aa13.64□□□□□ -0.23
MRPL55-216ENST00000366744 DCCP43146 1447 aa13.64□□□□□ -0.23
MRPL55-216ENST00000366744 PTPRUQ92729 1446 aa13.64□□□□□ -0.23
MRPL55-216ENST00000366744 METP08581 1390 aa13.63□□□□□ -0.23
MRPL55-216ENST00000366744 PIK3C2GO75747 1445 aa13.63□□□□□ -0.23
MRPL55-216ENST00000366744 RBM33Q96EV2 1170 aaKnown RBP13.62□□□□□ -0.23
MRPL55-216ENST00000366744 ATF3P18847 181 aa13.61□□□□□ -0.23
MRPL55-216ENST00000366744 ADGRL3Q9HAR2 1447 aa13.61□□□□□ -0.23
MRPL55-216ENST00000366744 PRAG1Q86YV5 1406 aa13.6□□□□□ -0.23
MRPL55-216ENST00000366744 FAM135BQ49AJ0 1406 aa13.59□□□□□ -0.23
MRPL55-216ENST00000366744 HSPA1LP34931 641 aa13.59□□□□□ -0.23
MRPL55-216ENST00000366744 CADPS2Q86UW7 1296 aa13.59□□□□□ -0.23
MRPL55-216ENST00000366744 NRXN1Q9ULB1 1477 aa13.59□□□□□ -0.23
MRPL55-216ENST00000366744 C19orf44Q9H6X5 657 aa13.58□□□□□ -0.24
MRPL55-216ENST00000366744 ASXL1Q8IXJ9 1541 aa13.58□□□□□ -0.24
MRPL55-216ENST00000366744 ADGRF5Q8IZF2 1346 aa13.58□□□□□ -0.24
MRPL55-216ENST00000366744 CDC42BPGQ6DT37 1551 aa13.58□□□□□ -0.24
MRPL55-216ENST00000366744 MED1Q15648 1581 aaPredicted RBP13.57□□□□□ -0.24
MRPL55-216ENST00000366744 KIAA1210Q9ULL0 1709 aa13.56□□□□□ -0.24
MRPL55-216ENST00000366744 NHSL1Q5SYE7 1610 aa13.55□□□□□ -0.24
MRPL55-216ENST00000366744 AHDC1Q5TGY3 1603 aaPredicted RBP13.55□□□□□ -0.24
MRPL55-216ENST00000366744 SLAIN2Q9P270 581 aa13.55□□□□□ -0.24
MRPL55-216ENST00000366744 DISP3Q9P2K9 1392 aa13.55□□□□□ -0.24
MRPL55-216ENST00000366744 TECPR2O15040 1411 aa13.55□□□□□ -0.24
MRPL55-216ENST00000366744 TRIM26Q12899 539 aaPredicted RBP13.54□□□□□ -0.24
MRPL55-216ENST00000366744 LRPPRCP42704 1394 aaKnown RBP13.54□□□□□ -0.24
MRPL55-216ENST00000366744 ROBO2Q9HCK4 1378 aa13.54□□□□□ -0.24
MRPL55-216ENST00000366744 YTHDC2Q9H6S0 1430 aaKnown RBP13.54□□□□□ -0.24
MRPL55-216ENST00000366744 COL16A1Q07092 1604 aaPredicted RBP13.53□□□□□ -0.24
MRPL55-216ENST00000366744 STAC3Q96MF2 364 aa13.53□□□□□ -0.24
MRPL55-216ENST00000366744 DHX57Q6P158 1386 aaKnown RBP13.53□□□□□ -0.24
MRPL55-216ENST00000366744 FMN2Q9NZ56 1722 aa13.53□□□□□ -0.24
MRPL55-216ENST00000366744 DCAF11Q8TEB1 546 aa13.52□□□□□ -0.25
MRPL55-216ENST00000366744 MST1RQ04912 1400 aa13.52□□□□□ -0.25
MRPL55-216ENST00000366744 SHPRHQ149N8 1683 aa13.52□□□□□ -0.25
MRPL55-216ENST00000366744 ARHGEF28Q8N1W1 1705 aaKnown RBP13.51□□□□□ -0.25
MRPL55-216ENST00000366744 DLC1Q96QB1 1528 aa13.51□□□□□ -0.25
MRPL55-216ENST00000366744 STK26Q9P289 416 aa13.51□□□□□ -0.25
MRPL55-216ENST00000366744 KIF1AQ12756 1690 aa13.5□□□□□ -0.25
MRPL55-216ENST00000366744 KDM2AQ9Y2K7 1162 aa13.5□□□□□ -0.25
MRPL55-216ENST00000366744 ADGRB1O14514 1584 aa13.49□□□□□ -0.25
MRPL55-216ENST00000366744 ABCC11Q96J66 1382 aa13.49□□□□□ -0.25
MRPL55-216ENST00000366744 PHF23Q9BUL5 403 aaPredicted RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms