RNA–Protein interactions for RNA: ENST00000366699.3

TRIM11-202, Transcript of tripartite motif containing 11, humanhuman

TSL 2 BASIC

Gene TRIM11, Length 2,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-202ENST00000366699 MLH3Q9UHC1 1453 aa23.37■■□□□ 1.33
TRIM11-202ENST00000366699 CC2D1BQ5T0F9 858 aaKnown RBP23.37■■□□□ 1.33
TRIM11-202ENST00000366699 KIAA1210Q9ULL0 1709 aa23.36■■□□□ 1.33
TRIM11-202ENST00000366699 KNSTRNQ9Y448 316 aa23.34■■□□□ 1.33
TRIM11-202ENST00000366699 ZMYM4Q5VZL5 1548 aa23.34■■□□□ 1.33
TRIM11-202ENST00000366699 PDE3BQ13370 1112 aa23.33■■□□□ 1.33
TRIM11-202ENST00000366699 SENP3-EIF4A1A0A087X0R7 540 aa23.31■■□□□ 1.32
TRIM11-202ENST00000366699 MAP3K4Q9Y6R4 1608 aa23.3■■□□□ 1.32
TRIM11-202ENST00000366699 CCDC136Q96JN2 1154 aa23.3■■□□□ 1.32
TRIM11-202ENST00000366699 PPRC1Q5VV67 1664 aaKnown RBP23.3■■□□□ 1.32
TRIM11-202ENST00000366699 NEO1Q92859 1461 aa23.3■■□□□ 1.32
TRIM11-202ENST00000366699 SYNMO15061 1565 aa23.3■■□□□ 1.32
TRIM11-202ENST00000366699 HECW2Q9P2P5 1572 aa23.3■■□□□ 1.32
TRIM11-202ENST00000366699 KIF1BO60333 1816 aa23.29■■□□□ 1.32
TRIM11-202ENST00000366699 MSH5O43196 834 aa23.28■■□□□ 1.32
TRIM11-202ENST00000366699 UGGT1Q9NYU2 1555 aa23.28■■□□□ 1.32
TRIM11-202ENST00000366699 CFAP70Q5T0N1 1121 aa23.26■■□□□ 1.31
TRIM11-202ENST00000366699 ADGRF5Q8IZF2 1346 aa23.26■■□□□ 1.31
TRIM11-202ENST00000366699 GGT6Q6P531 493 aa23.25■■□□□ 1.31
TRIM11-202ENST00000366699 NRXN1Q9ULB1 1477 aa23.25■■□□□ 1.31
TRIM11-202ENST00000366699 FRMPD1Q5SYB0 1578 aa23.23■■□□□ 1.31
TRIM11-202ENST00000366699 NPC1L1Q9UHC9 1359 aa23.23■■□□□ 1.31
TRIM11-202ENST00000366699 BLMP54132 1417 aaPredicted RBP23.23■■□□□ 1.31
TRIM11-202ENST00000366699 NPATQ14207 1427 aa23.23■■□□□ 1.31
TRIM11-202ENST00000366699 ADGRB3O60242 1522 aa23.23■■□□□ 1.31
TRIM11-202ENST00000366699 CYB5RLQ6IPT4 315 aa23.22■■□□□ 1.31
TRIM11-202ENST00000366699 RCAN3Q9UKA8 241 aa23.22■■□□□ 1.31
TRIM11-202ENST00000366699 ABCA6Q8N139 1617 aa23.22■■□□□ 1.31
TRIM11-202ENST00000366699 RRP1P56182 461 aaKnown RBP23.22■■□□□ 1.31
TRIM11-202ENST00000366699 AMER1Q5JTC6 1135 aaPredicted RBP23.22■■□□□ 1.31
TRIM11-202ENST00000366699 RPGRIP1LQ68CZ1 1315 aa23.22■■□□□ 1.31
TRIM11-202ENST00000366699 CHGAP10645 457 aaKnown RBP23.21■■□□□ 1.31
TRIM11-202ENST00000366699 ASXL1Q8IXJ9 1541 aa23.21■■□□□ 1.31
TRIM11-202ENST00000366699 IFT172Q9UG01 1749 aa23.2■■□□□ 1.3
TRIM11-202ENST00000366699 PPP2R1AP30153 589 aa23.19■■□□□ 1.3
TRIM11-202ENST00000366699 KDM5AP29375 1690 aaKnown RBP23.18■■□□□ 1.3
TRIM11-202ENST00000366699 SALL2Q9Y467 1007 aaPredicted RBP23.18■■□□□ 1.3
TRIM11-202ENST00000366699 SBNO2Q9Y2G9 1366 aa23.18■■□□□ 1.3
TRIM11-202ENST00000366699 NOS1P29475 1434 aa23.18■■□□□ 1.3
TRIM11-202ENST00000366699 ABCC3O15438 1527 aa23.17■■□□□ 1.3
TRIM11-202ENST00000366699 SETBP1Q9Y6X0 1596 aa23.17■■□□□ 1.3
TRIM11-202ENST00000366699 WDR43Q15061 677 aaKnown RBP eCLIP23.16■■□□□ 1.3
TRIM11-202ENST00000366699 MROH2AA6NES4 1674 aa23.16■■□□□ 1.3
TRIM11-202ENST00000366699 ERICH6Q7L0X2 663 aa23.16■■□□□ 1.3
TRIM11-202ENST00000366699 RAPGEF3O95398 923 aa23.15■■□□□ 1.3
TRIM11-202ENST00000366699 ERVK-7P63135 1459 aa23.14■■□□□ 1.3
TRIM11-202ENST00000366699 PIK3C2GO75747 1445 aa23.14■■□□□ 1.3
TRIM11-202ENST00000366699 C14orf93Q9H972 538 aaKnown RBP23.13■■□□□ 1.29
TRIM11-202ENST00000366699 CENPJQ9HC77 1338 aaPredicted RBP23.13■■□□□ 1.29
TRIM11-202ENST00000366699 MYOM1P52179 1685 aa23.12■■□□□ 1.29
TRIM11-202ENST00000366699 MYO3AQ8NEV4 1616 aa23.12■■□□□ 1.29
TRIM11-202ENST00000366699 ADAMTS8Q9UP79 889 aa23.11■■□□□ 1.29
TRIM11-202ENST00000366699 CDCA7LQ96GN5 454 aa23.1■■□□□ 1.29
TRIM11-202ENST00000366699 DIP2CQ9Y2E4 1556 aa23.09■■□□□ 1.29
TRIM11-202ENST00000366699 ARHGAP31Q2M1Z3 1444 aa23.09■■□□□ 1.29
TRIM11-202ENST00000366699 CAMSAP1Q5T5Y3 1602 aa23.09■■□□□ 1.29
TRIM11-202ENST00000366699 EXOC6Q8TAG9 804 aa23.08■■□□□ 1.29
TRIM11-202ENST00000366699 VGFO15240 615 aaPredicted RBP23.08■■□□□ 1.28
TRIM11-202ENST00000366699 PPLO60437 1756 aa23.06■■□□□ 1.28
TRIM11-202ENST00000366699 RIMBP3CA6NJZ7 1639 aa23.05■■□□□ 1.28
TRIM11-202ENST00000366699 RIMBP3BA6NNM3 1639 aa23.05■■□□□ 1.28
TRIM11-202ENST00000366699 RIMBP3Q9UFD9 1639 aa23.05■■□□□ 1.28
TRIM11-202ENST00000366699 TRAK1Q9UPV9 953 aa23.05■■□□□ 1.28
TRIM11-202ENST00000366699 ZC3H13Q5T200 1668 aaKnown RBP23.04■■□□□ 1.28
TRIM11-202ENST00000366699 GLI2P10070 1586 aa23.04■■□□□ 1.28
TRIM11-202ENST00000366699 SLC52A1Q9NWF4 448 aa23.03■■□□□ 1.28
TRIM11-202ENST00000366699 ADGRB1O14514 1584 aa23.02■■□□□ 1.28
TRIM11-202ENST00000366699 RICTORQ6R327 1708 aa23.02■■□□□ 1.28
TRIM11-202ENST00000366699 PIK3C2BO00750 1634 aa23.01■■□□□ 1.27
TRIM11-202ENST00000366699 CARD14Q9BXL6 1004 aa23.01■■□□□ 1.27
TRIM11-202ENST00000366699 PUS7Q96PZ0 661 aaKnown RBP23■■□□□ 1.27
TRIM11-202ENST00000366699 BCL11AQ9H165 835 aa22.99■■□□□ 1.27
TRIM11-202ENST00000366699 TCERG1O14776 1098 aaKnown RBP22.97■■□□□ 1.27
TRIM11-202ENST00000366699 TMEM132EQ6IEE7 984 aa22.97■■□□□ 1.27
TRIM11-202ENST00000366699 NGEFQ8N5V2 710 aa22.97■■□□□ 1.27
TRIM11-202ENST00000366699 YEATS2Q9ULM3 1422 aa22.97■■□□□ 1.27
TRIM11-202ENST00000366699 ZFYVE9O95405 1425 aa22.96■■□□□ 1.27
TRIM11-202ENST00000366699 ANP32AP39687 249 aaKnown RBP22.96■■□□□ 1.27
TRIM11-202ENST00000366699 GOLGA2Q08379 1002 aa22.96■■□□□ 1.27
TRIM11-202ENST00000366699 NEXMIFQ5QGS0 1516 aa22.95■■□□□ 1.27
TRIM11-202ENST00000366699 CFAP65Q6ZU64 1925 aaKnown RBP22.95■■□□□ 1.26
TRIM11-202ENST00000366699 IDI1Q13907 227 aa22.95■■□□□ 1.26
TRIM11-202ENST00000366699 SIGLEC1Q9BZZ2 1709 aa22.95■■□□□ 1.26
TRIM11-202ENST00000366699 EVC2Q86UK5 1308 aa22.94■■□□□ 1.26
TRIM11-202ENST00000366699 QRICH2Q9H0J4 1663 aa22.94■■□□□ 1.26
TRIM11-202ENST00000366699 NOP58Q9Y2X3 529 aaKnown RBP22.94■■□□□ 1.26
TRIM11-202ENST00000366699 ZNF521Q96K83 1311 aa22.93■■□□□ 1.26
TRIM11-202ENST00000366699 PLEKHH1Q9ULM0 1364 aa22.93■■□□□ 1.26
TRIM11-202ENST00000366699 FAM69CQ0P6D2 419 aa22.93■■□□□ 1.26
TRIM11-202ENST00000366699 PLIN1O60240 522 aa22.92■■□□□ 1.26
TRIM11-202ENST00000366699 NSD3Q9BZ95 1437 aa22.92■■□□□ 1.26
TRIM11-202ENST00000366699 POLR3AO14802 1390 aaPredicted RBP22.92■■□□□ 1.26
TRIM11-202ENST00000366699 MORC1Q86VD1 984 aa22.91■■□□□ 1.26
TRIM11-202ENST00000366699 DUSP27Q5VZP5 1158 aa22.9■■□□□ 1.26
TRIM11-202ENST00000366699 IPO9Q96P70 1041 aaKnown RBP22.9■■□□□ 1.26
TRIM11-202ENST00000366699 SLC12A5Q9H2X9 1139 aa22.9■■□□□ 1.26
TRIM11-202ENST00000366699 MS4A1P11836 297 aa22.89■■□□□ 1.26
TRIM11-202ENST00000366699 CRBNQ96SW2 442 aa22.89■■□□□ 1.25
TRIM11-202ENST00000366699 PPP6R1Q9UPN7 881 aa22.88■■□□□ 1.25
TRIM11-202ENST00000366699 CGNL1Q0VF96 1302 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms