RNA–Protein interactions for RNA: ENST00000366663.9

C1orf198-201, Transcript of chromosome 1 open reading frame 198, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C1orf198, Length 3,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf198-201ENST00000366663 CGNQ9P2M7 1197 aaKnown RBP23.7■■□□□ 1.39
C1orf198-201ENST00000366663 PRPF40AO75400 957 aaKnown RBP23.7■■□□□ 1.38
C1orf198-201ENST00000366663 TRERF1Q96PN7 1200 aa23.69■■□□□ 1.38
C1orf198-201ENST00000366663 TSC1Q92574 1164 aa23.69■■□□□ 1.38
C1orf198-201ENST00000366663 TNPO1Q92973 898 aaKnown RBP23.69■■□□□ 1.38
C1orf198-201ENST00000366663 ANKRD45Q5TZF3 282 aa23.68■■□□□ 1.38
C1orf198-201ENST00000366663 NUP155O75694 1391 aa23.68■■□□□ 1.38
C1orf198-201ENST00000366663 MAP3K1Q13233 1512 aa23.68■■□□□ 1.38
C1orf198-201ENST00000366663 CHMP4BQ9H444 224 aaKnown RBP23.66■■□□□ 1.38
C1orf198-201ENST00000366663 MYOM3Q5VTT5 1437 aa23.66■■□□□ 1.38
C1orf198-201ENST00000366663 NBPF1Q3BBV0 1214 aa23.65■■□□□ 1.38
C1orf198-201ENST00000366663 CDK13Q14004 1512 aaKnown RBP23.65■■□□□ 1.38
C1orf198-201ENST00000366663 ERBB4Q15303 1308 aa23.64■■□□□ 1.38
C1orf198-201ENST00000366663 E9PSI1 815 aa23.64■■□□□ 1.38
C1orf198-201ENST00000366663 CHMP4AQ9BY43 222 aa23.64■■□□□ 1.38
C1orf198-201ENST00000366663 MRC2Q9UBG0 1479 aa23.64■■□□□ 1.38
C1orf198-201ENST00000366663 ZNF592Q92610 1267 aa23.64■■□□□ 1.37
C1orf198-201ENST00000366663 U2AF1L5P0DN76 240 aaPredicted RBP23.63■■□□□ 1.37
C1orf198-201ENST00000366663 U2AF1Q01081 240 aaKnown RBP eCLIP23.63■■□□□ 1.37
C1orf198-201ENST00000366663 SSFA2P28290 1259 aa23.63■■□□□ 1.37
C1orf198-201ENST00000366663 ELL2O00472 640 aaPredicted RBP23.62■■□□□ 1.37
C1orf198-201ENST00000366663 CSPP1Q1MSJ5 1256 aa23.62■■□□□ 1.37
C1orf198-201ENST00000366663 SNAPC4Q5SXM2 1469 aa23.62■■□□□ 1.37
C1orf198-201ENST00000366663 GRIN2BQ13224 1484 aa23.61■■□□□ 1.37
C1orf198-201ENST00000366663 CTTNBP2Q8WZ74 1663 aa23.6■■□□□ 1.37
C1orf198-201ENST00000366663 CHMP3Q9Y3E7 222 aa23.6■■□□□ 1.37
C1orf198-201ENST00000366663 NAIPQ13075 1403 aa23.6■■□□□ 1.37
C1orf198-201ENST00000366663 JPH4Q96JJ6 628 aa23.6■■□□□ 1.37
C1orf198-201ENST00000366663 AAMPQ13685 434 aa23.59■■□□□ 1.37
C1orf198-201ENST00000366663 AEBP1Q8IUX7 1158 aa23.59■■□□□ 1.37
C1orf198-201ENST00000366663 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.59■■□□□ 1.37
C1orf198-201ENST00000366663 GAS2L3Q86XJ1 694 aa23.59■■□□□ 1.37
C1orf198-201ENST00000366663 DUSP27Q5VZP5 1158 aa23.59■■□□□ 1.37
C1orf198-201ENST00000366663 ZNF830Q96NB3 372 aaPredicted RBP23.59■■□□□ 1.37
C1orf198-201ENST00000366663 NPHP1O15259 732 aa23.58■■□□□ 1.37
C1orf198-201ENST00000366663 MORC1Q86VD1 984 aa23.58■■□□□ 1.37
C1orf198-201ENST00000366663 PTMSP20962 102 aa23.58■■□□□ 1.37
C1orf198-201ENST00000366663 TBC1D32Q96NH3 1257 aa23.58■■□□□ 1.37
C1orf198-201ENST00000366663 TAOK2Q9UL54 1235 aa23.58■■□□□ 1.36
C1orf198-201ENST00000366663 TNNQ9UQP3 1299 aa23.57■■□□□ 1.36
C1orf198-201ENST00000366663 RBM27Q9P2N5 1060 aaKnown RBP23.57■■□□□ 1.36
C1orf198-201ENST00000366663 ABCA5Q8WWZ7 1642 aa23.57■■□□□ 1.36
C1orf198-201ENST00000366663 ERICH4A6NGS2 130 aa23.56■■□□□ 1.36
C1orf198-201ENST00000366663 SYCE3A1L190 88 aa23.56■■□□□ 1.36
C1orf198-201ENST00000366663 HFM1A2PYH4 1435 aa23.55■■□□□ 1.36
C1orf198-201ENST00000366663 PPP4R3BQ5MIZ7 849 aa23.55■■□□□ 1.36
C1orf198-201ENST00000366663 MTERF4Q7Z6M4 381 aaKnown RBP23.55■■□□□ 1.36
C1orf198-201ENST00000366663 CFAP43Q8NDM7 1665 aa23.53■■□□□ 1.36
C1orf198-201ENST00000366663 CFAP53Q96M91 514 aa23.53■■□□□ 1.36
C1orf198-201ENST00000366663 PLEKHD1A6NEE1 506 aa23.52■■□□□ 1.36
C1orf198-201ENST00000366663 SPC24Q8NBT2 197 aa23.52■■□□□ 1.36
C1orf198-201ENST00000366663 OFD1O75665 1012 aa23.51■■□□□ 1.35
C1orf198-201ENST00000366663 PPP2R1AP30153 589 aa23.51■■□□□ 1.35
C1orf198-201ENST00000366663 CASC1Q6TDU7 716 aa23.51■■□□□ 1.35
C1orf198-201ENST00000366663 FGD1P98174 961 aa23.51■■□□□ 1.35
C1orf198-201ENST00000366663 RBM42Q9BTD8 480 aaKnown RBP23.51■■□□□ 1.35
C1orf198-201ENST00000366663 EPRSP07814 1512 aaKnown RBP23.5■■□□□ 1.35
C1orf198-201ENST00000366663 ZKSCAN2Q63HK3 967 aa23.5■■□□□ 1.35
C1orf198-201ENST00000366663 DZIP1LQ8IYY4 767 aaKnown RBP23.5■■□□□ 1.35
C1orf198-201ENST00000366663 C1orf115Q9H7X2 142 aa23.5■■□□□ 1.35
C1orf198-201ENST00000366663 CCDC39Q9UFE4 941 aa23.5■■□□□ 1.35
C1orf198-201ENST00000366663 SAFB2Q14151 953 aaKnown RBP eCLIP23.5■■□□□ 1.35
C1orf198-201ENST00000366663 IQGAP2Q13576 1575 aa23.49■■□□□ 1.35
C1orf198-201ENST00000366663 PCDHB15Q9Y5E8 787 aa23.49■■□□□ 1.35
C1orf198-201ENST00000366663 TARBP1Q13395 1621 aaKnown RBP23.49■■□□□ 1.35
C1orf198-201ENST00000366663 CDCA8Q53HL2 280 aa23.48■■□□□ 1.35
C1orf198-201ENST00000366663 SLFN5Q08AF3 891 aa23.48■■□□□ 1.35
C1orf198-201ENST00000366663 KDM2BQ8NHM5 1336 aa23.48■■□□□ 1.35
C1orf198-201ENST00000366663 MAGI3Q5TCQ9 1506 aa23.46■■□□□ 1.35
C1orf198-201ENST00000366663 SPINK5Q9NQ38 1064 aaPredicted RBP23.46■■□□□ 1.35
C1orf198-201ENST00000366663 PRG4Q92954 1404 aaPredicted RBP23.45■■□□□ 1.34
C1orf198-201ENST00000366663 PDCL2Q8N4E4 241 aa23.45■■□□□ 1.34
C1orf198-201ENST00000366663 ISY1Q9ULR0 285 aaKnown RBP23.45■■□□□ 1.34
C1orf198-201ENST00000366663 IFT140Q96RY7 1462 aa23.45■■□□□ 1.34
C1orf198-201ENST00000366663 TSR2Q969E8 191 aaKnown RBP23.45■■□□□ 1.34
C1orf198-201ENST00000366663 SASS6Q6UVJ0 657 aa23.44■■□□□ 1.34
C1orf198-201ENST00000366663 DHX29Q7Z478 1369 aaKnown RBP23.44■■□□□ 1.34
C1orf198-201ENST00000366663 JARID2Q92833 1246 aaPredicted RBP23.44■■□□□ 1.34
C1orf198-201ENST00000366663 NAP1L2Q9ULW6 460 aaPredicted RBP23.44■■□□□ 1.34
C1orf198-201ENST00000366663 SYAP1Q96A49 352 aaPredicted RBP23.43■■□□□ 1.34
C1orf198-201ENST00000366663 PDE3AQ14432 1141 aa23.42■■□□□ 1.34
C1orf198-201ENST00000366663 C17orf53Q8N3J3 647 aaPredicted RBP23.42■■□□□ 1.34
C1orf198-201ENST00000366663 KIF3AQ9Y496 699 aa23.42■■□□□ 1.34
C1orf198-201ENST00000366663 KCNJ4P48050 445 aa23.41■■□□□ 1.34
C1orf198-201ENST00000366663 THOC2Q8NI27 1593 aaKnown RBP23.41■■□□□ 1.34
C1orf198-201ENST00000366663 SUPT6HQ7KZ85 1726 aaKnown RBP23.41■■□□□ 1.34
C1orf198-201ENST00000366663 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.41■■□□□ 1.34
C1orf198-201ENST00000366663 K7ELQ4 463 aaPredicted RBP23.41■■□□□ 1.34
C1orf198-201ENST00000366663 ST18O60284 1047 aa23.41■■□□□ 1.34
C1orf198-201ENST00000366663 EHBP1L1Q8N3D4 1523 aa23.4■■□□□ 1.34
C1orf198-201ENST00000366663 FSD2A1L4K1 749 aa23.4■■□□□ 1.34
C1orf198-201ENST00000366663 PRIM1P49642 420 aaKnown RBP23.4■■□□□ 1.34
C1orf198-201ENST00000366663 GOLGA6L4A6NEF3 574 aa23.4■■□□□ 1.34
C1orf198-201ENST00000366663 HNRNPMP52272 730 aaKnown RBP eCLIP23.39■■□□□ 1.34
C1orf198-201ENST00000366663 IFT57Q9NWB7 429 aa23.39■■□□□ 1.34
C1orf198-201ENST00000366663 PLB1Q6P1J6 1458 aa23.39■■□□□ 1.34
C1orf198-201ENST00000366663 SAMD9Q5K651 1589 aa23.39■■□□□ 1.34
C1orf198-201ENST00000366663 GDPD2Q9HCC8 539 aa23.39■■□□□ 1.34
C1orf198-201ENST00000366663 PTPN23Q9H3S7 1636 aa23.39■■□□□ 1.33
C1orf198-201ENST00000366663 DYNC1I1O14576 645 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms