RNA–Protein interactions for RNA: ENST00000361901.6

CALD1-202, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,114 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-202ENST00000361901 SLC12A5Q9H2X9 1139 aa12.05□□□□□ -0.48
CALD1-202ENST00000361901 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.05□□□□□ -0.48
CALD1-202ENST00000361901 ADGBQ8N7X0 1667 aa12.05□□□□□ -0.48
CALD1-202ENST00000361901 ADCY10Q96PN6 1610 aa12.05□□□□□ -0.48
CALD1-202ENST00000361901 ZBTB7CA1YPR0 619 aa12.05□□□□□ -0.48
CALD1-202ENST00000361901 ARHGEF5Q12774 1597 aa12.04□□□□□ -0.48
CALD1-202ENST00000361901 ATP7AQ04656 1500 aa12.03□□□□□ -0.48
CALD1-202ENST00000361901 SHROOM2Q13796 1616 aa12.03□□□□□ -0.48
CALD1-202ENST00000361901 HDGFP51858 240 aaKnown RBP12.03□□□□□ -0.48
CALD1-202ENST00000361901 B4GALNT3Q6L9W6 998 aa12.02□□□□□ -0.49
CALD1-202ENST00000361901 SLC52A1Q9NWF4 448 aa12.02□□□□□ -0.49
CALD1-202ENST00000361901 RTEL1-TNFRSF6BF6WH68 1400 aa12.02□□□□□ -0.49
CALD1-202ENST00000361901 NOS1P29475 1434 aa12.02□□□□□ -0.49
CALD1-202ENST00000361901 DISP3Q9P2K9 1392 aa12.01□□□□□ -0.49
CALD1-202ENST00000361901 PRAM1Q96QH2 718 aa12.01□□□□□ -0.49
CALD1-202ENST00000361901 LAS1LQ9Y4W2 734 aaKnown RBP12.01□□□□□ -0.49
CALD1-202ENST00000361901 CFAP53Q96M91 514 aa12.01□□□□□ -0.49
CALD1-202ENST00000361901 PRAG1Q86YV5 1406 aa12.01□□□□□ -0.49
CALD1-202ENST00000361901 ABCC1P33527 1531 aa12.01□□□□□ -0.49
CALD1-202ENST00000361901 STAC3Q96MF2 364 aa12□□□□□ -0.49
CALD1-202ENST00000361901 YEATS2Q9ULM3 1422 aa12□□□□□ -0.49
CALD1-202ENST00000361901 EVC2Q86UK5 1308 aa12□□□□□ -0.49
CALD1-202ENST00000361901 TXNDC2Q86VQ3 553 aa11.99□□□□□ -0.49
CALD1-202ENST00000361901 LMOD2Q6P5Q4 547 aa11.99□□□□□ -0.49
CALD1-202ENST00000361901 SLC26A8Q96RN1 970 aa11.99□□□□□ -0.49
CALD1-202ENST00000361901 EID1Q9Y6B2 187 aa11.99□□□□□ -0.49
CALD1-202ENST00000361901 RRP7AQ9Y3A4 280 aaKnown RBP11.99□□□□□ -0.49
CALD1-202ENST00000361901 U2AF1L5P0DN76 240 aaPredicted RBP11.98□□□□□ -0.49
CALD1-202ENST00000361901 U2AF1Q01081 240 aaKnown RBP eCLIP11.98□□□□□ -0.49
CALD1-202ENST00000361901 HDGFL2Q7Z4V5 671 aaPredicted RBP11.98□□□□□ -0.49
CALD1-202ENST00000361901 WAPLQ7Z5K2 1190 aa11.98□□□□□ -0.49
CALD1-202ENST00000361901 GGNBP2Q9H3C7 697 aa11.98□□□□□ -0.49
CALD1-202ENST00000361901 TESK2Q96S53 571 aa11.97□□□□□ -0.49
CALD1-202ENST00000361901 RSPH6AQ9H0K4 717 aa11.97□□□□□ -0.49
CALD1-202ENST00000361901 TSPOAP1O95153 1857 aa11.97□□□□□ -0.49
CALD1-202ENST00000361901 PLA2R1Q13018 1463 aa11.97□□□□□ -0.49
CALD1-202ENST00000361901 ZMYND15Q9H091 742 aa11.97□□□□□ -0.49
CALD1-202ENST00000361901 POGZQ7Z3K3 1410 aa11.97□□□□□ -0.49
CALD1-202ENST00000361901 RALGAPBQ86X10 1494 aa11.97□□□□□ -0.49
CALD1-202ENST00000361901 PNISRQ8TF01 805 aaKnown RBP11.96□□□□□ -0.49
CALD1-202ENST00000361901 ADAMTS8Q9UP79 889 aa11.96□□□□□ -0.5
CALD1-202ENST00000361901 NAP1L5Q96NT1 182 aaPredicted RBP11.96□□□□□ -0.5
CALD1-202ENST00000361901 UGGT1Q9NYU2 1555 aa11.95□□□□□ -0.5
CALD1-202ENST00000361901 TERF2IPQ9NYB0 399 aa11.95□□□□□ -0.5
CALD1-202ENST00000361901 ZBED9Q6R2W3 1325 aa11.94□□□□□ -0.5
CALD1-202ENST00000361901 APAF1O14727 1248 aa11.94□□□□□ -0.5
CALD1-202ENST00000361901 PPP2R1AP30153 589 aa11.94□□□□□ -0.5
CALD1-202ENST00000361901 CDCA7LQ96GN5 454 aa11.94□□□□□ -0.5
CALD1-202ENST00000361901 MAST1Q9Y2H9 1570 aa11.94□□□□□ -0.5
CALD1-202ENST00000361901 NUDCQ9Y266 331 aa11.93□□□□□ -0.5
CALD1-202ENST00000361901 PAK3O75914 559 aaPredicted RBP11.93□□□□□ -0.5
CALD1-202ENST00000361901 C14orf93Q9H972 538 aaKnown RBP11.93□□□□□ -0.5
CALD1-202ENST00000361901 CROCC2H7BZ55 1655 aa11.92□□□□□ -0.5
CALD1-202ENST00000361901 PLIN1O60240 522 aa11.92□□□□□ -0.5
CALD1-202ENST00000361901 FRAT1Q92837 279 aaPredicted RBP11.92□□□□□ -0.5
CALD1-202ENST00000361901 CABP1Q9NZU7 370 aa11.92□□□□□ -0.5
CALD1-202ENST00000361901 CGNL1Q0VF96 1302 aa11.92□□□□□ -0.5
CALD1-202ENST00000361901 RPGRIP1LQ68CZ1 1315 aa11.92□□□□□ -0.5
CALD1-202ENST00000361901 ATP10AO60312 1499 aa11.92□□□□□ -0.5
CALD1-202ENST00000361901 ZFYVE16Q7Z3T8 1539 aa11.92□□□□□ -0.5
CALD1-202ENST00000361901 RBM33Q96EV2 1170 aaKnown RBP11.92□□□□□ -0.5
CALD1-202ENST00000361901 SPATA31E1Q6ZUB1 1445 aa11.91□□□□□ -0.5
CALD1-202ENST00000361901 CDK19Q9BWU1 502 aa11.91□□□□□ -0.5
CALD1-202ENST00000361901 MAPK8IP3Q9UPT6 1336 aa11.91□□□□□ -0.5
CALD1-202ENST00000361901 NPATQ14207 1427 aa11.91□□□□□ -0.5
CALD1-202ENST00000361901 RCAN3Q9UKA8 241 aa11.91□□□□□ -0.5
CALD1-202ENST00000361901 BRPF3Q9ULD4 1205 aa11.91□□□□□ -0.5
CALD1-202ENST00000361901 MTHFSP49914 203 aa11.9□□□□□ -0.5
CALD1-202ENST00000361901 HSP90AA2PQ14568 343 aaPredicted RBP11.9□□□□□ -0.5
CALD1-202ENST00000361901 UHRF1BP1Q6BDS2 1440 aa11.9□□□□□ -0.5
CALD1-202ENST00000361901 SCAF11Q99590 1463 aaKnown RBP11.89□□□□□ -0.51
CALD1-202ENST00000361901 NGDNQ8NEJ9 315 aaKnown RBP11.89□□□□□ -0.51
CALD1-202ENST00000361901 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.89□□□□□ -0.51
CALD1-202ENST00000361901 PPP4R2Q9NY27 417 aa11.89□□□□□ -0.51
CALD1-202ENST00000361901 BRD4O60885 1362 aaPredicted RBP11.89□□□□□ -0.51
CALD1-202ENST00000361901 NEO1Q92859 1461 aa11.88□□□□□ -0.51
CALD1-202ENST00000361901 PDE4CQ08493 712 aa11.87□□□□□ -0.51
CALD1-202ENST00000361901 PMFBP1Q8TBY8 1022 aa11.87□□□□□ -0.51
CALD1-202ENST00000361901 FBLN1P23142 703 aa11.87□□□□□ -0.51
CALD1-202ENST00000361901 ARXQ96QS3 562 aa11.87□□□□□ -0.51
CALD1-202ENST00000361901 NUTM2GQ5VZR2 741 aa11.87□□□□□ -0.51
CALD1-202ENST00000361901 GOLGA2Q08379 1002 aa11.86□□□□□ -0.51
CALD1-202ENST00000361901 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.86□□□□□ -0.51
CALD1-202ENST00000361901 PER1O15534 1290 aaPredicted RBP11.86□□□□□ -0.51
CALD1-202ENST00000361901 HSP90AA1P07900 732 aaKnown RBP11.86□□□□□ -0.51
CALD1-202ENST00000361901 ABCA9Q8IUA7 1624 aa11.86□□□□□ -0.51
CALD1-202ENST00000361901 IPO9Q96P70 1041 aaKnown RBP11.85□□□□□ -0.51
CALD1-202ENST00000361901 PLXNC1O60486 1568 aa11.85□□□□□ -0.51
CALD1-202ENST00000361901 BCL2L13Q9BXK5 485 aa11.84□□□□□ -0.51
CALD1-202ENST00000361901 MLH3Q9UHC1 1453 aa11.84□□□□□ -0.51
CALD1-202ENST00000361901 NSD3Q9BZ95 1437 aa11.84□□□□□ -0.51
CALD1-202ENST00000361901 LTV1Q96GA3 475 aaPredicted RBP11.84□□□□□ -0.51
CALD1-202ENST00000361901 CARD14Q9BXL6 1004 aa11.84□□□□□ -0.51
CALD1-202ENST00000361901 ZMYM3Q14202 1370 aa11.84□□□□□ -0.51
CALD1-202ENST00000361901 PRDM15P57071 1507 aaPredicted RBP11.84□□□□□ -0.51
CALD1-202ENST00000361901 KDM5DQ9BY66 1539 aa11.84□□□□□ -0.51
CALD1-202ENST00000361901 HMOX1P09601 288 aa11.83□□□□□ -0.52
CALD1-202ENST00000361901 AMER1Q5JTC6 1135 aaPredicted RBP11.83□□□□□ -0.52
CALD1-202ENST00000361901 RIMBP3CA6NJZ7 1639 aa11.82□□□□□ -0.52
CALD1-202ENST00000361901 RIMBP3BA6NNM3 1639 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms