RNA–Protein interactions for RNA: ENST00000361672.6

MSL3-203, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-203ENST00000361672 ZFYVE9O95405 1425 aa13.13□□□□□ -0.31
MSL3-203ENST00000361672 UPF1Q92900 1129 aaKnown RBP eCLIP13.13□□□□□ -0.31
MSL3-203ENST00000361672 NCOA3Q9Y6Q9 1424 aa13.12□□□□□ -0.31
MSL3-203ENST00000361672 CHD2O14647 1828 aaKnown RBP13.11□□□□□ -0.31
MSL3-203ENST00000361672 PLEKHG1Q9ULL1 1385 aa13.11□□□□□ -0.31
MSL3-203ENST00000361672 PHLPP1O60346 1717 aa13.1□□□□□ -0.31
MSL3-203ENST00000361672 SHPRHQ149N8 1683 aa13.1□□□□□ -0.31
MSL3-203ENST00000361672 TXNDC2Q86VQ3 553 aa13.1□□□□□ -0.31
MSL3-203ENST00000361672 MYO5BQ9ULV0 1848 aa13.1□□□□□ -0.31
MSL3-203ENST00000361672 LTKP29376 864 aa13.09□□□□□ -0.31
MSL3-203ENST00000361672 PIK3R4Q99570 1358 aa13.09□□□□□ -0.31
MSL3-203ENST00000361672 JCADQ9P266 1359 aa13.09□□□□□ -0.31
MSL3-203ENST00000361672 SPHKAPQ2M3C7 1700 aa13.08□□□□□ -0.32
MSL3-203ENST00000361672 HDGFP51858 240 aaKnown RBP13.08□□□□□ -0.32
MSL3-203ENST00000361672 IDI1Q13907 227 aa13.08□□□□□ -0.32
MSL3-203ENST00000361672 RRBP1Q9P2E9 1410 aaKnown RBP13.08□□□□□ -0.32
MSL3-203ENST00000361672 KCNA6P17658 529 aa13.07□□□□□ -0.32
MSL3-203ENST00000361672 COL16A1Q07092 1604 aaPredicted RBP13.06□□□□□ -0.32
MSL3-203ENST00000361672 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.06□□□□□ -0.32
MSL3-203ENST00000361672 FOXD1Q16676 465 aa13.05□□□□□ -0.32
MSL3-203ENST00000361672 ZNF772Q68DY9 489 aaPredicted RBP13.05□□□□□ -0.32
MSL3-203ENST00000361672 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.05□□□□□ -0.32
MSL3-203ENST00000361672 RIMS2Q9UQ26 1411 aa13.05□□□□□ -0.32
MSL3-203ENST00000361672 FAM50AQ14320 339 aaKnown RBP13.05□□□□□ -0.32
MSL3-203ENST00000361672 CHIC2Q9UKJ5 165 aa13.05□□□□□ -0.32
MSL3-203ENST00000361672 SPATA31A6Q5VVP1 1343 aa13.05□□□□□ -0.32
MSL3-203ENST00000361672 TRPM2O94759 1503 aa13.04□□□□□ -0.32
MSL3-203ENST00000361672 SETBP1Q9Y6X0 1596 aa13.03□□□□□ -0.32
MSL3-203ENST00000361672 STAG3Q9UJ98 1225 aa13.03□□□□□ -0.32
MSL3-203ENST00000361672 AHDC1Q5TGY3 1603 aaPredicted RBP13.03□□□□□ -0.32
MSL3-203ENST00000361672 TBX22Q9Y458 520 aa13.01□□□□□ -0.33
MSL3-203ENST00000361672 XRN1Q8IZH2 1706 aaKnown RBP13.01□□□□□ -0.33
MSL3-203ENST00000361672 ADAMTS13Q76LX8 1427 aa12.99□□□□□ -0.33
MSL3-203ENST00000361672 NRXN3Q9Y4C0 1643 aa12.99□□□□□ -0.33
MSL3-203ENST00000361672 PRAG1Q86YV5 1406 aa12.99□□□□□ -0.33
MSL3-203ENST00000361672 TMEM94Q12767 1356 aa12.99□□□□□ -0.33
MSL3-203ENST00000361672 DCCP43146 1447 aa12.98□□□□□ -0.33
MSL3-203ENST00000361672 KIF1BO60333 1816 aa12.98□□□□□ -0.33
MSL3-203ENST00000361672 ACIN1Q9UKV3 1341 aaKnown RBP12.98□□□□□ -0.33
MSL3-203ENST00000361672 LRP6O75581 1613 aa12.97□□□□□ -0.33
MSL3-203ENST00000361672 NUP155O75694 1391 aa12.97□□□□□ -0.33
MSL3-203ENST00000361672 MSH6P52701 1360 aa12.96□□□□□ -0.33
MSL3-203ENST00000361672 LRP5O75197 1615 aa12.95□□□□□ -0.34
MSL3-203ENST00000361672 CLTCL1P53675 1640 aa12.95□□□□□ -0.34
MSL3-203ENST00000361672 HFM1A2PYH4 1435 aa12.95□□□□□ -0.34
MSL3-203ENST00000361672 NEXMIFQ5QGS0 1516 aa12.95□□□□□ -0.34
MSL3-203ENST00000361672 NAIPQ13075 1403 aa12.95□□□□□ -0.34
MSL3-203ENST00000361672 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.94□□□□□ -0.34
MSL3-203ENST00000361672 RXRBP28702 533 aa12.92□□□□□ -0.34
MSL3-203ENST00000361672 PROSER2Q86WR7 435 aaPredicted RBP12.92□□□□□ -0.34
MSL3-203ENST00000361672 LAMC1P11047 1609 aa12.92□□□□□ -0.34
MSL3-203ENST00000361672 PPP1R15AO75807 674 aaPredicted RBP12.91□□□□□ -0.34
MSL3-203ENST00000361672 PPLO60437 1756 aa12.9□□□□□ -0.34
MSL3-203ENST00000361672 NHSL1Q5SYE7 1610 aa12.9□□□□□ -0.34
MSL3-203ENST00000361672 SLC26A8Q96RN1 970 aa12.89□□□□□ -0.35
MSL3-203ENST00000361672 RPGRIP1LQ68CZ1 1315 aa12.89□□□□□ -0.35
MSL3-203ENST00000361672 PTCH1Q13635 1447 aa12.88□□□□□ -0.35
MSL3-203ENST00000361672 PTPRUQ92729 1446 aa12.88□□□□□ -0.35
MSL3-203ENST00000361672 ATAD2Q6PL18 1390 aa12.87□□□□□ -0.35
MSL3-203ENST00000361672 IFT172Q9UG01 1749 aa12.87□□□□□ -0.35
MSL3-203ENST00000361672 SENP3Q9H4L4 574 aaPredicted RBP12.87□□□□□ -0.35
MSL3-203ENST00000361672 RGS12O14924 1447 aa12.87□□□□□ -0.35
MSL3-203ENST00000361672 CADPS2Q86UW7 1296 aa12.86□□□□□ -0.35
MSL3-203ENST00000361672 MEX3CQ5U5Q3 659 aaKnown RBP12.86□□□□□ -0.35
MSL3-203ENST00000361672 TRIM52Q96A61 297 aa12.85□□□□□ -0.35
MSL3-203ENST00000361672 C19orf44Q9H6X5 657 aa12.85□□□□□ -0.35
MSL3-203ENST00000361672 SLAIN2Q9P270 581 aa12.85□□□□□ -0.35
MSL3-203ENST00000361672 KNDC1Q76NI1 1749 aa12.85□□□□□ -0.35
MSL3-203ENST00000361672 ADGRL3Q9HAR2 1447 aa12.85□□□□□ -0.35
MSL3-203ENST00000361672 ZRANB1Q9UGI0 708 aa12.85□□□□□ -0.35
MSL3-203ENST00000361672 NALCNQ8IZF0 1738 aa12.84□□□□□ -0.35
MSL3-203ENST00000361672 CCDC125Q86Z20 511 aa12.83□□□□□ -0.35
MSL3-203ENST00000361672 SETD5Q9C0A6 1442 aa12.83□□□□□ -0.36
MSL3-203ENST00000361672 BCANQ96GW7 911 aa12.83□□□□□ -0.36
MSL3-203ENST00000361672 ASXL1Q8IXJ9 1541 aa12.82□□□□□ -0.36
MSL3-203ENST00000361672 RBM6P78332 1123 aaKnown RBP12.82□□□□□ -0.36
MSL3-203ENST00000361672 MST1RQ04912 1400 aa12.82□□□□□ -0.36
MSL3-203ENST00000361672 CHGAP10645 457 aaKnown RBP12.81□□□□□ -0.36
MSL3-203ENST00000361672 AMOTL2Q9Y2J4 779 aa12.8□□□□□ -0.36
MSL3-203ENST00000361672 CDC42BPGQ6DT37 1551 aa12.79□□□□□ -0.36
MSL3-203ENST00000361672 TECPR2O15040 1411 aa12.79□□□□□ -0.36
MSL3-203ENST00000361672 VGFO15240 615 aaPredicted RBP12.79□□□□□ -0.36
MSL3-203ENST00000361672 ATF3P18847 181 aa12.79□□□□□ -0.36
MSL3-203ENST00000361672 METP08581 1390 aa12.78□□□□□ -0.36
MSL3-203ENST00000361672 COL22A1Q8NFW1 1626 aaPredicted RBP12.77□□□□□ -0.36
MSL3-203ENST00000361672 AFF2P51816 1311 aa12.77□□□□□ -0.37
MSL3-203ENST00000361672 SPATA31E1Q6ZUB1 1445 aa12.77□□□□□ -0.37
MSL3-203ENST00000361672 ANKRD30BQ9BXX2 1392 aa12.76□□□□□ -0.37
MSL3-203ENST00000361672 ITGAEP38570 1179 aa12.76□□□□□ -0.37
MSL3-203ENST00000361672 NGLY1Q96IV0 654 aa12.76□□□□□ -0.37
MSL3-203ENST00000361672 MYOM2P54296 1465 aa12.75□□□□□ -0.37
MSL3-203ENST00000361672 ZNF326Q5BKZ1 582 aaKnown RBP12.75□□□□□ -0.37
MSL3-203ENST00000361672 NRXN1Q9ULB1 1477 aa12.75□□□□□ -0.37
MSL3-203ENST00000361672 BRINP3Q76B58 766 aa12.73□□□□□ -0.37
MSL3-203ENST00000361672 CCDC144AA2RUR9 1427 aa12.73□□□□□ -0.37
MSL3-203ENST00000361672 C1orf167Q5SNV9 1468 aa12.73□□□□□ -0.37
MSL3-203ENST00000361672 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.73□□□□□ -0.37
MSL3-203ENST00000361672 KIF1AQ12756 1690 aa12.73□□□□□ -0.37
MSL3-203ENST00000361672 C14orf37Q86TY3 774 aa12.72□□□□□ -0.37
MSL3-203ENST00000361672 SLC4A1APQ9BWU0 796 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms