RNA–Protein interactions for RNA: ENST00000360906.9

NLRC4-202, Transcript of NLR family CARD domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRC4, Length 3,359 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4-202ENST00000360906 SYNMO15061 1565 aa9.1□□□□□ -0.95
NLRC4-202ENST00000360906 ST20-MTHFSA0A0A6YYL1 179 aa9.1□□□□□ -0.95
NLRC4-202ENST00000360906 HSPA5P11021 654 aaKnown RBP9.1□□□□□ -0.95
NLRC4-202ENST00000360906 RIMS2Q9UQ26 1411 aa9.1□□□□□ -0.95
NLRC4-202ENST00000360906 C3P01024 1663 aa9.1□□□□□ -0.95
NLRC4-202ENST00000360906 POGKQ9P215 609 aa9.09□□□□□ -0.95
NLRC4-202ENST00000360906 ARHGAP31Q2M1Z3 1444 aa9.09□□□□□ -0.95
NLRC4-202ENST00000360906 REREQ9P2R6 1566 aa9.09□□□□□ -0.95
NLRC4-202ENST00000360906 MINK1Q8N4C8 1332 aaPredicted RBP9.09□□□□□ -0.95
NLRC4-202ENST00000360906 HDGFP51858 240 aaKnown RBP9.09□□□□□ -0.95
NLRC4-202ENST00000360906 TMEM2Q9UHN6 1383 aa9.08□□□□□ -0.96
NLRC4-202ENST00000360906 PREX1Q8TCU6 1659 aa9.08□□□□□ -0.96
NLRC4-202ENST00000360906 SPATA31E1Q6ZUB1 1445 aa9.08□□□□□ -0.96
NLRC4-202ENST00000360906 A2ML1A8K2U0 1454 aa9.07□□□□□ -0.96
NLRC4-202ENST00000360906 LMTK2Q8IWU2 1503 aa9.07□□□□□ -0.96
NLRC4-202ENST00000360906 SPHKAPQ2M3C7 1700 aa9.07□□□□□ -0.96
NLRC4-202ENST00000360906 ADAMTSL3P82987 1691 aa9.07□□□□□ -0.96
NLRC4-202ENST00000360906 PIK3C2BO00750 1634 aa9.07□□□□□ -0.96
NLRC4-202ENST00000360906 AMOTL2Q9Y2J4 779 aa9.07□□□□□ -0.96
NLRC4-202ENST00000360906 TRPM2O94759 1503 aa9.06□□□□□ -0.96
NLRC4-202ENST00000360906 EIF4G2P78344 907 aaKnown RBP eCLIP9.06□□□□□ -0.96
NLRC4-202ENST00000360906 PRAM1Q96QH2 718 aa9.06□□□□□ -0.96
NLRC4-202ENST00000360906 DDX10Q13206 875 aaKnown RBP9.06□□□□□ -0.96
NLRC4-202ENST00000360906 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.06□□□□□ -0.96
NLRC4-202ENST00000360906 MYO5BQ9ULV0 1848 aa9.06□□□□□ -0.96
NLRC4-202ENST00000360906 KCNA6P17658 529 aa9.06□□□□□ -0.96
NLRC4-202ENST00000360906 SETD1BQ9UPS6 1966 aaKnown RBP9.05□□□□□ -0.96
NLRC4-202ENST00000360906 METP08581 1390 aa9.05□□□□□ -0.96
NLRC4-202ENST00000360906 ZNF335Q9H4Z2 1342 aaPredicted RBP9.05□□□□□ -0.96
NLRC4-202ENST00000360906 SCAF1Q9H7N4 1312 aaKnown RBP9.05□□□□□ -0.96
NLRC4-202ENST00000360906 C11orf95C9JLR9 678 aaPredicted RBP9.04□□□□□ -0.96
NLRC4-202ENST00000360906 TMC1Q8TDI8 760 aa9.04□□□□□ -0.96
NLRC4-202ENST00000360906 C14orf93Q9H972 538 aaKnown RBP9.04□□□□□ -0.96
NLRC4-202ENST00000360906 PROSER2Q86WR7 435 aaPredicted RBP9.04□□□□□ -0.96
NLRC4-202ENST00000360906 SPATA31D1Q6ZQQ2 1576 aa9.03□□□□□ -0.96
NLRC4-202ENST00000360906 MROH2AA6NES4 1674 aa9.03□□□□□ -0.96
NLRC4-202ENST00000360906 CABP2Q9NPB3 220 aa9.03□□□□□ -0.96
NLRC4-202ENST00000360906 RPGRIP1LQ68CZ1 1315 aa9.03□□□□□ -0.96
NLRC4-202ENST00000360906 SRPK2P78362 688 aaKnown RBP9.03□□□□□ -0.96
NLRC4-202ENST00000360906 TIMELESSQ9UNS1 1208 aa9.03□□□□□ -0.96
NLRC4-202ENST00000360906 KIF1BO60333 1816 aa9.02□□□□□ -0.97
NLRC4-202ENST00000360906 PRAG1Q86YV5 1406 aa9.02□□□□□ -0.97
NLRC4-202ENST00000360906 USP47Q96K76 1375 aa9.02□□□□□ -0.97
NLRC4-202ENST00000360906 ZC3H13Q5T200 1668 aaKnown RBP9.02□□□□□ -0.97
NLRC4-202ENST00000360906 ZNF316A6NFI3 1004 aaPredicted RBP9.01□□□□□ -0.97
NLRC4-202ENST00000360906 PLEKHH1Q9ULM0 1364 aa9.01□□□□□ -0.97
NLRC4-202ENST00000360906 NLRP1Q9C000 1473 aa9.01□□□□□ -0.97
NLRC4-202ENST00000360906 CEP170BQ9Y4F5 1589 aaPredicted RBP9.01□□□□□ -0.97
NLRC4-202ENST00000360906 TMEM131LA2VDJ0 1609 aa9□□□□□ -0.97
NLRC4-202ENST00000360906 XPCQ01831 940 aaPredicted RBP9□□□□□ -0.97
NLRC4-202ENST00000360906 PMFBP1Q8TBY8 1022 aa8.99□□□□□ -0.97
NLRC4-202ENST00000360906 SCAF11Q99590 1463 aaKnown RBP8.99□□□□□ -0.97
NLRC4-202ENST00000360906 LMTK3Q96Q04 1460 aa8.99□□□□□ -0.97
NLRC4-202ENST00000360906 ADGRB3O60242 1522 aa8.99□□□□□ -0.97
NLRC4-202ENST00000360906 PIP4K2BP78356 416 aa8.98□□□□□ -0.97
NLRC4-202ENST00000360906 LMOD2Q6P5Q4 547 aa8.98□□□□□ -0.97
NLRC4-202ENST00000360906 DDX17Q92841 729 aaKnown RBP8.98□□□□□ -0.97
NLRC4-202ENST00000360906 SOX12O15370 315 aa8.98□□□□□ -0.97
NLRC4-202ENST00000360906 CENPJQ9HC77 1338 aaPredicted RBP8.98□□□□□ -0.97
NLRC4-202ENST00000360906 MYO3AQ8NEV4 1616 aa8.98□□□□□ -0.97
NLRC4-202ENST00000360906 NPHP4O75161 1426 aaPredicted RBP8.98□□□□□ -0.97
NLRC4-202ENST00000360906 ZFYVE9O95405 1425 aa8.98□□□□□ -0.97
NLRC4-202ENST00000360906 TBX22Q9Y458 520 aa8.98□□□□□ -0.97
NLRC4-202ENST00000360906 NEXMIFQ5QGS0 1516 aa8.97□□□□□ -0.97
NLRC4-202ENST00000360906 SENP3-EIF4A1A0A087X0R7 540 aa8.97□□□□□ -0.97
NLRC4-202ENST00000360906 SLC12A5Q9H2X9 1139 aa8.96□□□□□ -0.97
NLRC4-202ENST00000360906 ROBO2Q9HCK4 1378 aa8.96□□□□□ -0.97
NLRC4-202ENST00000360906 TNNT2P45379 298 aaPredicted RBP8.96□□□□□ -0.97
NLRC4-202ENST00000360906 CDK19Q9BWU1 502 aa8.96□□□□□ -0.97
NLRC4-202ENST00000360906 UBR1Q8IWV7 1749 aa8.96□□□□□ -0.98
NLRC4-202ENST00000360906 PIK3C2GO75747 1445 aa8.96□□□□□ -0.98
NLRC4-202ENST00000360906 NUTM2GQ5VZR2 741 aa8.96□□□□□ -0.98
NLRC4-202ENST00000360906 ADAMTS13Q76LX8 1427 aa8.95□□□□□ -0.98
NLRC4-202ENST00000360906 PLEKHG1Q9ULL1 1385 aa8.95□□□□□ -0.98
NLRC4-202ENST00000360906 PTPRUQ92729 1446 aa8.95□□□□□ -0.98
NLRC4-202ENST00000360906 YTHDC2Q9H6S0 1430 aaKnown RBP8.95□□□□□ -0.98
NLRC4-202ENST00000360906 WASHC2AQ641Q2 1341 aa8.94□□□□□ -0.98
NLRC4-202ENST00000360906 ESCO1Q5FWF5 840 aa8.94□□□□□ -0.98
NLRC4-202ENST00000360906 PAK3O75914 559 aaPredicted RBP8.94□□□□□ -0.98
NLRC4-202ENST00000360906 TMF1P82094 1093 aa8.94□□□□□ -0.98
NLRC4-202ENST00000360906 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.94□□□□□ -0.98
NLRC4-202ENST00000360906 TESK2Q96S53 571 aa8.94□□□□□ -0.98
NLRC4-202ENST00000360906 CABP1Q9NZU7 370 aa8.94□□□□□ -0.98
NLRC4-202ENST00000360906 ZBTB7CA1YPR0 619 aa8.93□□□□□ -0.98
NLRC4-202ENST00000360906 ORAI2Q96SN7 254 aa8.93□□□□□ -0.98
NLRC4-202ENST00000360906 ALKQ9UM73 1620 aa8.93□□□□□ -0.98
NLRC4-202ENST00000360906 DISP3Q9P2K9 1392 aa8.93□□□□□ -0.98
NLRC4-202ENST00000360906 KIF7Q2M1P5 1343 aa8.93□□□□□ -0.98
NLRC4-202ENST00000360906 FOXO3O43524 673 aa8.93□□□□□ -0.98
NLRC4-202ENST00000360906 DIEXFQ68CQ4 756 aaKnown RBP8.93□□□□□ -0.98
NLRC4-202ENST00000360906 STAC3Q96MF2 364 aa8.93□□□□□ -0.98
NLRC4-202ENST00000360906 CC2D1BQ5T0F9 858 aaKnown RBP8.92□□□□□ -0.98
NLRC4-202ENST00000360906 TMEM94Q12767 1356 aa8.92□□□□□ -0.98
NLRC4-202ENST00000360906 ATF3P18847 181 aa8.92□□□□□ -0.98
NLRC4-202ENST00000360906 FBLN1P23142 703 aa8.92□□□□□ -0.98
NLRC4-202ENST00000360906 DMRT2Q9Y5R5 561 aa8.92□□□□□ -0.98
NLRC4-202ENST00000360906 NGDNQ8NEJ9 315 aaKnown RBP8.91□□□□□ -0.98
NLRC4-202ENST00000360906 PANK3Q9H999 370 aa8.91□□□□□ -0.98
NLRC4-202ENST00000360906 PPLO60437 1756 aa8.91□□□□□ -0.98
NLRC4-202ENST00000360906 RALGAPBQ86X10 1494 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms