RNA–Protein interactions for RNA: ENST00000360428.8

DSC3-201, Transcript of desmocollin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DSC3, Length 6,939 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSC3-201ENST00000360428 FOXD4L4Q8WXT5 416 aaPredicted RBP7.18□□□□□ -1.26
DSC3-201ENST00000360428 FAM13BQ9NYF5 915 aa7.18□□□□□ -1.26
DSC3-201ENST00000360428 STK26Q9P289 416 aa7.18□□□□□ -1.26
DSC3-201ENST00000360428 UACAQ9BZF9 1416 aa7.18□□□□□ -1.26
DSC3-201ENST00000360428 FRAT2O75474 233 aaPredicted RBP7.18□□□□□ -1.26
DSC3-201ENST00000360428 SOGA1O94964 1423 aa7.18□□□□□ -1.26
DSC3-201ENST00000360428 CARMIL2Q6F5E8 1435 aa7.18□□□□□ -1.26
DSC3-201ENST00000360428 CARMIL1Q5VZK9 1371 aa7.18□□□□□ -1.26
DSC3-201ENST00000360428 MCTP1Q6DN14 999 aa7.17□□□□□ -1.26
DSC3-201ENST00000360428 ZNF330Q9Y3S2 320 aaPredicted RBP7.17□□□□□ -1.26
DSC3-201ENST00000360428 RAB3GAP2Q9H2M9 1393 aa7.17□□□□□ -1.26
DSC3-201ENST00000360428 RRP1P56182 461 aaKnown RBP7.17□□□□□ -1.26
DSC3-201ENST00000360428 SAFB2Q14151 953 aaKnown RBP eCLIP7.17□□□□□ -1.26
DSC3-201ENST00000360428 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.17□□□□□ -1.26
DSC3-201ENST00000360428 BICD2Q8TD16 824 aa7.16□□□□□ -1.26
DSC3-201ENST00000360428 DDX19BQ9UMR2 479 aa7.16□□□□□ -1.26
DSC3-201ENST00000360428 ZRSR2Q15696 482 aaKnown RBP7.16□□□□□ -1.26
DSC3-201ENST00000360428 ZBED9Q6R2W3 1325 aa7.16□□□□□ -1.26
DSC3-201ENST00000360428 MRE11P49959 708 aa7.16□□□□□ -1.26
DSC3-201ENST00000360428 OLFM4Q6UX06 510 aa7.16□□□□□ -1.26
DSC3-201ENST00000360428 INTS3Q68E01 1043 aaKnown RBP7.16□□□□□ -1.26
DSC3-201ENST00000360428 RSPH4AQ5TD94 716 aa7.16□□□□□ -1.26
DSC3-201ENST00000360428 NUP155O75694 1391 aa7.16□□□□□ -1.26
DSC3-201ENST00000360428 WWC1Q8IX03 1113 aa7.15□□□□□ -1.26
DSC3-201ENST00000360428 ANO2Q9NQ90 1003 aa7.15□□□□□ -1.26
DSC3-201ENST00000360428 CLUAP1Q96AJ1 413 aa7.15□□□□□ -1.26
DSC3-201ENST00000360428 IFT57Q9NWB7 429 aa7.15□□□□□ -1.26
DSC3-201ENST00000360428 KIF7Q2M1P5 1343 aa7.15□□□□□ -1.26
DSC3-201ENST00000360428 AMPHP49418 695 aa7.15□□□□□ -1.26
DSC3-201ENST00000360428 TRDNQ13061 729 aa7.15□□□□□ -1.26
DSC3-201ENST00000360428 CCDC73Q6ZRK6 1079 aa7.15□□□□□ -1.26
DSC3-201ENST00000360428 H0YHG0 523 aa7.15□□□□□ -1.26
DSC3-201ENST00000360428 CPLX1O14810 134 aa7.15□□□□□ -1.26
DSC3-201ENST00000360428 APPP05067 770 aa7.15□□□□□ -1.26
DSC3-201ENST00000360428 CCDC146Q8IYE0 955 aa7.15□□□□□ -1.26
DSC3-201ENST00000360428 ERICH2A1L162 156 aa7.15□□□□□ -1.27
DSC3-201ENST00000360428 SAFBQ15424 915 aaKnown RBP eCLIP7.15□□□□□ -1.27
DSC3-201ENST00000360428 ODF2Q5BJF6 829 aa7.15□□□□□ -1.27
DSC3-201ENST00000360428 TRIM34Q9BYJ4 488 aa7.15□□□□□ -1.27
DSC3-201ENST00000360428 SMC3Q9UQE7 1217 aa7.15□□□□□ -1.27
DSC3-201ENST00000360428 LEKR1Q6ZMV7 388 aa7.15□□□□□ -1.27
DSC3-201ENST00000360428 CTDP1Q9Y5B0 961 aaPredicted RBP7.15□□□□□ -1.27
DSC3-201ENST00000360428 NEXNQ0ZGT2 675 aa7.14□□□□□ -1.27
DSC3-201ENST00000360428 HSP90AB4PQ58FF6 505 aa7.14□□□□□ -1.27
DSC3-201ENST00000360428 ANO8Q9HCE9 1232 aaPredicted RBP7.14□□□□□ -1.27
DSC3-201ENST00000360428 NAP1L1P55209 391 aaKnown RBP7.14□□□□□ -1.27
DSC3-201ENST00000360428 HMGN5P82970 282 aaKnown RBP7.14□□□□□ -1.27
DSC3-201ENST00000360428 CUX2O14529 1486 aa7.14□□□□□ -1.27
DSC3-201ENST00000360428 CT47A1Q5JQC4 288 aaPredicted RBP7.13□□□□□ -1.27
DSC3-201ENST00000360428 SMARCE1Q969G3 411 aa7.13□□□□□ -1.27
DSC3-201ENST00000360428 API5Q9BZZ5 524 aaKnown RBP7.13□□□□□ -1.27
DSC3-201ENST00000360428 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.13□□□□□ -1.27
DSC3-201ENST00000360428 BRMS1Q9HCU9 246 aa7.13□□□□□ -1.27
DSC3-201ENST00000360428 GTF2E1P29083 439 aaPredicted RBP7.13□□□□□ -1.27
DSC3-201ENST00000360428 C1orf141Q5JVX7 400 aa7.13□□□□□ -1.27
DSC3-201ENST00000360428 IFIT2P09913 472 aaKnown RBP7.13□□□□□ -1.27
DSC3-201ENST00000360428 CAGE1Q8TC20 777 aa7.13□□□□□ -1.27
DSC3-201ENST00000360428 CRBNQ96SW2 442 aa7.13□□□□□ -1.27
DSC3-201ENST00000360428 EID1Q9Y6B2 187 aa7.13□□□□□ -1.27
DSC3-201ENST00000360428 NINLQ9Y2I6 1382 aa7.12□□□□□ -1.27
DSC3-201ENST00000360428 ERC2O15083 957 aa7.12□□□□□ -1.27
DSC3-201ENST00000360428 ERLIN2O94905 339 aa7.12□□□□□ -1.27
DSC3-201ENST00000360428 EPS15P42566 896 aa7.12□□□□□ -1.27
DSC3-201ENST00000360428 HSP90AB2PQ58FF8 381 aa7.12□□□□□ -1.27
DSC3-201ENST00000360428 NASPP49321 788 aaPredicted RBP7.12□□□□□ -1.27
DSC3-201ENST00000360428 CAVIN1Q6NZI2 390 aaKnown RBP7.12□□□□□ -1.27
DSC3-201ENST00000360428 TXLNBQ8N3L3 684 aa7.12□□□□□ -1.27
DSC3-201ENST00000360428 CCDC18Q5T9S5 1454 aa7.12□□□□□ -1.27
DSC3-201ENST00000360428 DDX58O95786 925 aaKnown RBP7.12□□□□□ -1.27
DSC3-201ENST00000360428 XBP1P17861 261 aa7.12□□□□□ -1.27
DSC3-201ENST00000360428 EFCAB2Q5VUJ9 269 aa7.12□□□□□ -1.27
DSC3-201ENST00000360428 PSMA5P28066 241 aa7.12□□□□□ -1.27
DSC3-201ENST00000360428 PIP4K2AP48426 406 aaPredicted RBP7.12□□□□□ -1.27
DSC3-201ENST00000360428 GGT6Q6P531 493 aa7.12□□□□□ -1.27
DSC3-201ENST00000360428 ANKRD18AQ8IVF6 992 aa7.12□□□□□ -1.27
DSC3-201ENST00000360428 NGDNQ8NEJ9 315 aaKnown RBP7.12□□□□□ -1.27
DSC3-201ENST00000360428 GOLGA6L7A0A1B0GV03 622 aa7.11□□□□□ -1.27
DSC3-201ENST00000360428 MBD3O95983 291 aa7.11□□□□□ -1.27
DSC3-201ENST00000360428 FILIP1LQ4L180 1135 aa7.11□□□□□ -1.27
DSC3-201ENST00000360428 CCDC43Q96MW1 224 aaKnown RBP7.11□□□□□ -1.27
DSC3-201ENST00000360428 USP8P40818 1118 aa7.11□□□□□ -1.27
DSC3-201ENST00000360428 NFXL1Q6ZNB6 911 aa7.11□□□□□ -1.27
DSC3-201ENST00000360428 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.11□□□□□ -1.27
DSC3-201ENST00000360428 MCM2P49736 904 aa7.11□□□□□ -1.27
DSC3-201ENST00000360428 TAF3Q5VWG9 929 aa7.11□□□□□ -1.27
DSC3-201ENST00000360428 R3HCC1Q9Y3T6 440 aaKnown RBP7.11□□□□□ -1.27
DSC3-201ENST00000360428 ATAD2BQ9ULI0 1458 aa7.11□□□□□ -1.27
DSC3-201ENST00000360428 KRI1Q8N9T8 703 aaKnown RBP7.11□□□□□ -1.27
DSC3-201ENST00000360428 C9orf78Q9NZ63 289 aaPredicted RBP7.11□□□□□ -1.27
DSC3-201ENST00000360428 RABEP1Q15276 862 aa7.1□□□□□ -1.27
DSC3-201ENST00000360428 FOXD4L6Q3SYB3 417 aaPredicted RBP7.1□□□□□ -1.27
DSC3-201ENST00000360428 FOXD4L3Q6VB84 417 aaPredicted RBP7.1□□□□□ -1.27
DSC3-201ENST00000360428 OFD1O75665 1012 aa7.1□□□□□ -1.27
DSC3-201ENST00000360428 EXOC6Q8TAG9 804 aa7.1□□□□□ -1.27
DSC3-201ENST00000360428 G3BP1Q13283 466 aaKnown RBP eCLIP7.1□□□□□ -1.27
DSC3-201ENST00000360428 MLECQ14165 292 aa7.1□□□□□ -1.27
DSC3-201ENST00000360428 DZIP1LQ8IYY4 767 aaKnown RBP7.1□□□□□ -1.27
DSC3-201ENST00000360428 TSPY26PQ9H489 355 aa7.1□□□□□ -1.27
DSC3-201ENST00000360428 EVC2Q86UK5 1308 aa7.1□□□□□ -1.27
DSC3-201ENST00000360428 KIAA0754O94854 1291 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms