RNA–Protein interactions for RNA: ENST00000360238.6

CUEDC1-201, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CUEDC1, Length 2,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-201ENST00000360238 MYOM1P52179 1685 aa35.4■■■■□ 3.26
CUEDC1-201ENST00000360238 UGGT1Q9NYU2 1555 aa35.4■■■■□ 3.26
CUEDC1-201ENST00000360238 MROH2AA6NES4 1674 aa35.39■■■■□ 3.26
CUEDC1-201ENST00000360238 POGZQ7Z3K3 1410 aa35.39■■■■□ 3.26
CUEDC1-201ENST00000360238 NPM1P06748 294 aaKnown RBP eCLIP35.39■■■■□ 3.26
CUEDC1-201ENST00000360238 CC2D1BQ5T0F9 858 aaKnown RBP35.38■■■■□ 3.25
CUEDC1-201ENST00000360238 BLMP54132 1417 aaPredicted RBP35.38■■■■□ 3.25
CUEDC1-201ENST00000360238 HECW2Q9P2P5 1572 aa35.37■■■■□ 3.25
CUEDC1-201ENST00000360238 KDM5AP29375 1690 aaKnown RBP35.37■■■■□ 3.25
CUEDC1-201ENST00000360238 OSCARQ8IYS5 282 aa35.37■■■■□ 3.25
CUEDC1-201ENST00000360238 MLH3Q9UHC1 1453 aa35.36■■■■□ 3.25
CUEDC1-201ENST00000360238 B4GALNT3Q6L9W6 998 aa35.35■■■■□ 3.25
CUEDC1-201ENST00000360238 CD109Q6YHK3 1445 aa35.35■■■■□ 3.25
CUEDC1-201ENST00000360238 PDE3BQ13370 1112 aa35.34■■■■□ 3.25
CUEDC1-201ENST00000360238 FRMPD1Q5SYB0 1578 aa35.33■■■■□ 3.25
CUEDC1-201ENST00000360238 NRXN1Q9ULB1 1477 aa35.32■■■■□ 3.25
CUEDC1-201ENST00000360238 ADGRB3O60242 1522 aa35.32■■■■□ 3.24
CUEDC1-201ENST00000360238 MYO3AQ8NEV4 1616 aa35.29■■■■□ 3.24
CUEDC1-201ENST00000360238 ASXL1Q8IXJ9 1541 aa35.27■■■■□ 3.24
CUEDC1-201ENST00000360238 SENP3-EIF4A1A0A087X0R7 540 aa35.27■■■■□ 3.24
CUEDC1-201ENST00000360238 SLC24A1O60721 1099 aa35.27■■■■□ 3.24
CUEDC1-201ENST00000360238 KNSTRNQ9Y448 316 aa35.25■■■■□ 3.23
CUEDC1-201ENST00000360238 SETBP1Q9Y6X0 1596 aa35.24■■■■□ 3.23
CUEDC1-201ENST00000360238 NPC1L1Q9UHC9 1359 aa35.23■■■■□ 3.23
CUEDC1-201ENST00000360238 PPLO60437 1756 aa35.22■■■■□ 3.23
CUEDC1-201ENST00000360238 AMER1Q5JTC6 1135 aaPredicted RBP35.21■■■■□ 3.23
CUEDC1-201ENST00000360238 NEO1Q92859 1461 aa35.21■■■■□ 3.23
CUEDC1-201ENST00000360238 ADGRF5Q8IZF2 1346 aa35.19■■■■□ 3.22
CUEDC1-201ENST00000360238 NPATQ14207 1427 aa35.19■■■■□ 3.22
CUEDC1-201ENST00000360238 FANCIQ9NVI1 1328 aa35.18■■■■□ 3.22
CUEDC1-201ENST00000360238 ERVK-7P63135 1459 aa35.18■■■■□ 3.22
CUEDC1-201ENST00000360238 CFAP70Q5T0N1 1121 aa35.17■■■■□ 3.22
CUEDC1-201ENST00000360238 ABCC3O15438 1527 aa35.16■■■■□ 3.22
CUEDC1-201ENST00000360238 SBNO2Q9Y2G9 1366 aa35.16■■■■□ 3.22
CUEDC1-201ENST00000360238 PIK3C2GO75747 1445 aa35.16■■■■□ 3.22
CUEDC1-201ENST00000360238 RRP1P56182 461 aaKnown RBP35.15■■■■□ 3.22
CUEDC1-201ENST00000360238 ANP32EQ9BTT0 268 aa35.15■■■■□ 3.22
CUEDC1-201ENST00000360238 CAMSAP1Q5T5Y3 1602 aa35.14■■■■□ 3.22
CUEDC1-201ENST00000360238 PPP2R1AP30153 589 aa35.14■■■■□ 3.22
CUEDC1-201ENST00000360238 RCAN3Q9UKA8 241 aa35.14■■■■□ 3.22
CUEDC1-201ENST00000360238 CCDC136Q96JN2 1154 aa35.13■■■■□ 3.21
CUEDC1-201ENST00000360238 NOS1P29475 1434 aa35.12■■■■□ 3.21
CUEDC1-201ENST00000360238 ZC3H13Q5T200 1668 aaKnown RBP35.1■■■■□ 3.21
CUEDC1-201ENST00000360238 CFAP65Q6ZU64 1925 aaKnown RBP35.1■■■■□ 3.21
CUEDC1-201ENST00000360238 SALL2Q9Y467 1007 aaPredicted RBP35.08■■■■□ 3.21
CUEDC1-201ENST00000360238 DIP2CQ9Y2E4 1556 aa35.07■■■■□ 3.2
CUEDC1-201ENST00000360238 PIK3C2BO00750 1634 aa35.05■■■■□ 3.2
CUEDC1-201ENST00000360238 RICTORQ6R327 1708 aa35.05■■■■□ 3.2
CUEDC1-201ENST00000360238 SIGLEC1Q9BZZ2 1709 aa35.04■■■■□ 3.2
CUEDC1-201ENST00000360238 ADAMTS8Q9UP79 889 aa35.03■■■■□ 3.2
CUEDC1-201ENST00000360238 QRICH2Q9H0J4 1663 aa35.02■■■■□ 3.2
CUEDC1-201ENST00000360238 ADGRB1O14514 1584 aa35.02■■■■□ 3.2
CUEDC1-201ENST00000360238 GGT6Q6P531 493 aa35.01■■■■□ 3.2
CUEDC1-201ENST00000360238 CDCA7LQ96GN5 454 aa35.01■■■■□ 3.2
CUEDC1-201ENST00000360238 RPGRIP1LQ68CZ1 1315 aa35.01■■■■□ 3.2
CUEDC1-201ENST00000360238 WDR43Q15061 677 aaKnown RBP eCLIP35.01■■■■□ 3.19
CUEDC1-201ENST00000360238 CENPJQ9HC77 1338 aaPredicted RBP34.96■■■■□ 3.19
CUEDC1-201ENST00000360238 CHGAP10645 457 aaKnown RBP34.95■■■■□ 3.19
CUEDC1-201ENST00000360238 C14orf93Q9H972 538 aaKnown RBP34.95■■■■□ 3.19
CUEDC1-201ENST00000360238 ARHGAP31Q2M1Z3 1444 aa34.93■■■■□ 3.18
CUEDC1-201ENST00000360238 NEXMIFQ5QGS0 1516 aa34.9■■■■□ 3.18
CUEDC1-201ENST00000360238 MSH5O43196 834 aa34.89■■■■□ 3.18
CUEDC1-201ENST00000360238 EXOC6Q8TAG9 804 aa34.89■■■■□ 3.18
CUEDC1-201ENST00000360238 RAPGEF3O95398 923 aa34.89■■■■□ 3.18
CUEDC1-201ENST00000360238 GLI2P10070 1586 aa34.88■■■■□ 3.17
CUEDC1-201ENST00000360238 PLEKHH1Q9ULM0 1364 aa34.88■■■■□ 3.17
CUEDC1-201ENST00000360238 ZNF521Q96K83 1311 aa34.87■■■■□ 3.17
CUEDC1-201ENST00000360238 USP32Q8NFA0 1604 aa34.86■■■■□ 3.17
CUEDC1-201ENST00000360238 CARD14Q9BXL6 1004 aa34.86■■■■□ 3.17
CUEDC1-201ENST00000360238 ARHGEF28Q8N1W1 1705 aaKnown RBP34.85■■■■□ 3.17
CUEDC1-201ENST00000360238 TRAK1Q9UPV9 953 aa34.8■■■■□ 3.16
CUEDC1-201ENST00000360238 PREX1Q8TCU6 1659 aa34.77■■■■□ 3.16
CUEDC1-201ENST00000360238 DUSP27Q5VZP5 1158 aa34.76■■■■□ 3.16
CUEDC1-201ENST00000360238 VGFO15240 615 aaPredicted RBP34.76■■■■□ 3.15
CUEDC1-201ENST00000360238 GOLGA2Q08379 1002 aa34.76■■■■□ 3.15
CUEDC1-201ENST00000360238 POLR3AO14802 1390 aaPredicted RBP34.76■■■■□ 3.15
CUEDC1-201ENST00000360238 ZFYVE9O95405 1425 aa34.75■■■■□ 3.15
CUEDC1-201ENST00000360238 NSD3Q9BZ95 1437 aa34.75■■■■□ 3.15
CUEDC1-201ENST00000360238 YEATS2Q9ULM3 1422 aa34.75■■■■□ 3.15
CUEDC1-201ENST00000360238 PUS7Q96PZ0 661 aaKnown RBP34.73■■■■□ 3.15
CUEDC1-201ENST00000360238 MYO5BQ9ULV0 1848 aa34.72■■■■□ 3.15
CUEDC1-201ENST00000360238 SHPRHQ149N8 1683 aa34.71■■■■□ 3.15
CUEDC1-201ENST00000360238 TMEM132EQ6IEE7 984 aa34.71■■■■□ 3.15
CUEDC1-201ENST00000360238 NGEFQ8N5V2 710 aa34.71■■■■□ 3.15
CUEDC1-201ENST00000360238 TULP4Q9NRJ4 1543 aa34.69■■■■□ 3.14
CUEDC1-201ENST00000360238 SLC52A1Q9NWF4 448 aa34.69■■■■□ 3.14
CUEDC1-201ENST00000360238 TMEM131LA2VDJ0 1609 aa34.68■■■■□ 3.14
CUEDC1-201ENST00000360238 PLIN1O60240 522 aa34.68■■■■□ 3.14
CUEDC1-201ENST00000360238 SLFN5Q08AF3 891 aa34.67■■■■□ 3.14
CUEDC1-201ENST00000360238 TRMT2AQ8IZ69 625 aaKnown RBP34.65■■■■□ 3.14
CUEDC1-201ENST00000360238 CCDC146Q8IYE0 955 aa34.64■■■■□ 3.14
CUEDC1-201ENST00000360238 CRBNQ96SW2 442 aa34.64■■■■□ 3.14
CUEDC1-201ENST00000360238 TCERG1O14776 1098 aaKnown RBP34.63■■■■□ 3.13
CUEDC1-201ENST00000360238 EVC2Q86UK5 1308 aa34.63■■■■□ 3.13
CUEDC1-201ENST00000360238 IDI1Q13907 227 aa34.63■■■■□ 3.13
CUEDC1-201ENST00000360238 SLC12A5Q9H2X9 1139 aa34.63■■■■□ 3.13
CUEDC1-201ENST00000360238 ERICH6Q7L0X2 663 aa34.62■■■■□ 3.13
CUEDC1-201ENST00000360238 APAF1O14727 1248 aa34.61■■■■□ 3.13
CUEDC1-201ENST00000360238 NKTRP30414 1462 aaKnown RBP34.61■■■■□ 3.13
CUEDC1-201ENST00000360238 DIP2BQ9P265 1576 aa34.6■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms