RNA–Protein interactions for RNA: ENST00000360171.10

CBWD3-201, Transcript of COBW domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBWD3, Length 2,165 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-201ENST00000360171 FBXO31Q5XUX0 539 aaPredicted RBP28.01■■■□□ 2.07
CBWD3-201ENST00000360171 CARD11Q9BXL7 1154 aa28.01■■■□□ 2.07
CBWD3-201ENST00000360171 MYOM2P54296 1465 aa28.01■■■□□ 2.07
CBWD3-201ENST00000360171 GPRASP1Q5JY77 1395 aa27.99■■■□□ 2.07
CBWD3-201ENST00000360171 NBPF1Q3BBV0 1214 aa27.99■■■□□ 2.07
CBWD3-201ENST00000360171 SPATA31D1Q6ZQQ2 1576 aa27.99■■■□□ 2.07
CBWD3-201ENST00000360171 CHGAP10645 457 aaKnown RBP27.99■■■□□ 2.07
CBWD3-201ENST00000360171 BCANQ96GW7 911 aa27.98■■■□□ 2.07
CBWD3-201ENST00000360171 STAC3Q96MF2 364 aa27.96■■■□□ 2.07
CBWD3-201ENST00000360171 KIAA1210Q9ULL0 1709 aa27.96■■■□□ 2.07
CBWD3-201ENST00000360171 IDI1Q13907 227 aa27.96■■■□□ 2.07
CBWD3-201ENST00000360171 WASHC2AQ641Q2 1341 aa27.96■■■□□ 2.07
CBWD3-201ENST00000360171 TMEM131LA2VDJ0 1609 aa27.96■■■□□ 2.07
CBWD3-201ENST00000360171 NRXN1Q9ULB1 1477 aa27.94■■■□□ 2.06
CBWD3-201ENST00000360171 C11orf95C9JLR9 678 aaPredicted RBP27.93■■■□□ 2.06
CBWD3-201ENST00000360171 SLC52A1Q9NWF4 448 aa27.93■■■□□ 2.06
CBWD3-201ENST00000360171 ZMYM3Q14202 1370 aa27.92■■■□□ 2.06
CBWD3-201ENST00000360171 ADGRF5Q8IZF2 1346 aa27.92■■■□□ 2.06
CBWD3-201ENST00000360171 NEXMIFQ5QGS0 1516 aa27.92■■■□□ 2.06
CBWD3-201ENST00000360171 ESF1Q9H501 851 aaKnown RBP27.9■■■□□ 2.06
CBWD3-201ENST00000360171 IQGAP1P46940 1657 aa27.9■■■□□ 2.06
CBWD3-201ENST00000360171 FER1L4A9Z1Z3 1794 aa27.89■■■□□ 2.05
CBWD3-201ENST00000360171 CCDC7Q96M83 1385 aa27.87■■■□□ 2.05
CBWD3-201ENST00000360171 RPGRIP1LQ68CZ1 1315 aa27.85■■■□□ 2.05
CBWD3-201ENST00000360171 ANP32EQ9BTT0 268 aa27.85■■■□□ 2.05
CBWD3-201ENST00000360171 ST20-MTHFSA0A0A6YYL1 179 aa27.84■■■□□ 2.05
CBWD3-201ENST00000360171 KIF7Q2M1P5 1343 aa27.83■■■□□ 2.05
CBWD3-201ENST00000360171 PIK3C2GO75747 1445 aa27.82■■■□□ 2.04
CBWD3-201ENST00000360171 C3P01024 1663 aa27.82■■■□□ 2.04
CBWD3-201ENST00000360171 HNRNPUQ00839 825 aaKnown RBP eCLIP27.81■■■□□ 2.04
CBWD3-201ENST00000360171 CFAP70Q5T0N1 1121 aa27.8■■■□□ 2.04
CBWD3-201ENST00000360171 ERICH6BQ5W0A0 696 aa27.77■■■□□ 2.04
CBWD3-201ENST00000360171 NUTM2DQ5VT03 806 aaPredicted RBP27.77■■■□□ 2.04
CBWD3-201ENST00000360171 A2ML1A8K2U0 1454 aa27.76■■■□□ 2.03
CBWD3-201ENST00000360171 SETBP1Q9Y6X0 1596 aa27.76■■■□□ 2.03
CBWD3-201ENST00000360171 SCAF11Q99590 1463 aaKnown RBP27.76■■■□□ 2.03
CBWD3-201ENST00000360171 ZFYVE9O95405 1425 aa27.74■■■□□ 2.03
CBWD3-201ENST00000360171 TNRQ92752 1358 aa27.74■■■□□ 2.03
CBWD3-201ENST00000360171 RBM19Q9Y4C8 960 aaKnown RBP27.73■■■□□ 2.03
CBWD3-201ENST00000360171 ADGRB1O14514 1584 aa27.72■■■□□ 2.03
CBWD3-201ENST00000360171 VGFO15240 615 aaPredicted RBP27.71■■■□□ 2.03
CBWD3-201ENST00000360171 PRKRIP1Q9H875 184 aaPredicted RBP27.7■■■□□ 2.03
CBWD3-201ENST00000360171 STAG3Q9UJ98 1225 aa27.7■■■□□ 2.03
CBWD3-201ENST00000360171 CEBPAP49715 358 aaPredicted RBP27.7■■■□□ 2.02
CBWD3-201ENST00000360171 TESK2Q96S53 571 aa27.7■■■□□ 2.02
CBWD3-201ENST00000360171 C14orf93Q9H972 538 aaKnown RBP27.7■■■□□ 2.02
CBWD3-201ENST00000360171 KDM5AP29375 1690 aaKnown RBP27.7■■■□□ 2.02
CBWD3-201ENST00000360171 UBR1Q8IWV7 1749 aa27.7■■■□□ 2.02
CBWD3-201ENST00000360171 RIMS1Q86UR5 1692 aaKnown RBP27.68■■■□□ 2.02
CBWD3-201ENST00000360171 ADAMTSL3P82987 1691 aa27.65■■■□□ 2.02
CBWD3-201ENST00000360171 MYO3AQ8NEV4 1616 aa27.65■■■□□ 2.02
CBWD3-201ENST00000360171 DISP3Q9P2K9 1392 aa27.64■■■□□ 2.02
CBWD3-201ENST00000360171 POLR3GLQ9BT43 218 aa27.64■■■□□ 2.02
CBWD3-201ENST00000360171 RIMS2Q9UQ26 1411 aa27.64■■■□□ 2.01
CBWD3-201ENST00000360171 ASXL1Q8IXJ9 1541 aa27.63■■■□□ 2.01
CBWD3-201ENST00000360171 EIF3AQ14152 1382 aaKnown RBP27.61■■■□□ 2.01
CBWD3-201ENST00000360171 NLRP1Q9C000 1473 aa27.61■■■□□ 2.01
CBWD3-201ENST00000360171 ZBED9Q6R2W3 1325 aa27.6■■■□□ 2.01
CBWD3-201ENST00000360171 TMEM132EQ6IEE7 984 aa27.6■■■□□ 2.01
CBWD3-201ENST00000360171 SENP3Q9H4L4 574 aaPredicted RBP27.6■■■□□ 2.01
CBWD3-201ENST00000360171 PLPPR3Q6T4P5 718 aa27.59■■■□□ 2.01
CBWD3-201ENST00000360171 ARHGEF28Q8N1W1 1705 aaKnown RBP27.58■■■□□ 2.01
CBWD3-201ENST00000360171 SETD1AO15047 1707 aaKnown RBP27.58■■■□□ 2.01
CBWD3-201ENST00000360171 ALKQ9UM73 1620 aa27.58■■■□□ 2.01
CBWD3-201ENST00000360171 CCDC184Q52MB2 194 aa27.57■■■□□ 2
CBWD3-201ENST00000360171 NRXN3Q9Y4C0 1643 aa27.56■■■□□ 2
CBWD3-201ENST00000360171 QRICH2Q9H0J4 1663 aa27.55■■■□□ 2
CBWD3-201ENST00000360171 TMF1P82094 1093 aa27.54■■■□□ 2
CBWD3-201ENST00000360171 MRS2Q9HD23 443 aa27.53■■■□□ 2
CBWD3-201ENST00000360171 TRAK1Q9UPV9 953 aa27.52■■■□□ 2
CBWD3-201ENST00000360171 PPP4R2Q9NY27 417 aa27.52■■■□□ 2
CBWD3-201ENST00000360171 PTPRMP28827 1452 aa27.52■■■□□ 2
CBWD3-201ENST00000360171 TMEM2Q9UHN6 1383 aa27.51■■□□□ 1.99
CBWD3-201ENST00000360171 FANCIQ9NVI1 1328 aa27.49■■□□□ 1.99
CBWD3-201ENST00000360171 CENPJQ9HC77 1338 aaPredicted RBP27.47■■□□□ 1.99
CBWD3-201ENST00000360171 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.47■■□□□ 1.99
CBWD3-201ENST00000360171 MYOM1P52179 1685 aa27.47■■□□□ 1.99
CBWD3-201ENST00000360171 SBNO2Q9Y2G9 1366 aa27.47■■□□□ 1.99
CBWD3-201ENST00000360171 FAM9BQ8IZU0 186 aa27.45■■□□□ 1.99
CBWD3-201ENST00000360171 YTHDC2Q9H6S0 1430 aaKnown RBP27.44■■□□□ 1.98
CBWD3-201ENST00000360171 SLIT1O75093 1534 aa27.43■■□□□ 1.98
CBWD3-201ENST00000360171 CEP170BQ9Y4F5 1589 aaPredicted RBP27.43■■□□□ 1.98
CBWD3-201ENST00000360171 ARHGAP23Q9P227 1491 aa27.42■■□□□ 1.98
CBWD3-201ENST00000360171 IRX6P78412 446 aaPredicted RBP27.42■■□□□ 1.98
CBWD3-201ENST00000360171 STK26Q9P289 416 aa27.4■■□□□ 1.98
CBWD3-201ENST00000360171 ZNF142P52746 1687 aaPredicted RBP27.4■■□□□ 1.98
CBWD3-201ENST00000360171 HDGFP51858 240 aaKnown RBP27.39■■□□□ 1.97
CBWD3-201ENST00000360171 LTKP29376 864 aa27.38■■□□□ 1.97
CBWD3-201ENST00000360171 SMG6Q86US8 1419 aaKnown RBP27.37■■□□□ 1.97
CBWD3-201ENST00000360171 CDCA8Q53HL2 280 aa27.36■■□□□ 1.97
CBWD3-201ENST00000360171 TULP4Q9NRJ4 1543 aa27.35■■□□□ 1.97
CBWD3-201ENST00000360171 SLC24A1O60721 1099 aa27.35■■□□□ 1.97
CBWD3-201ENST00000360171 SETD1BQ9UPS6 1966 aaKnown RBP27.35■■□□□ 1.97
CBWD3-201ENST00000360171 METP08581 1390 aa27.34■■□□□ 1.97
CBWD3-201ENST00000360171 PLEKHG1Q9ULL1 1385 aa27.34■■□□□ 1.97
CBWD3-201ENST00000360171 ADAMTS13Q76LX8 1427 aa27.34■■□□□ 1.97
CBWD3-201ENST00000360171 DLC1Q96QB1 1528 aa27.33■■□□□ 1.97
CBWD3-201ENST00000360171 KNDC1Q76NI1 1749 aa27.33■■□□□ 1.97
CBWD3-201ENST00000360171 LRPPRCP42704 1394 aaKnown RBP27.33■■□□□ 1.96
CBWD3-201ENST00000360171 TXNDC2Q86VQ3 553 aa27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms