RNA–Protein interactions for RNA: ENST00000358918.7

APP-205, Transcript of amyloid beta precursor protein, humanhuman

TSL 5 BASIC

Gene APP, Length 2,366 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-205ENST00000358918 ZMYM4Q5VZL5 1548 aa18.73■□□□□ 0.59
APP-205ENST00000358918 PLA2R1Q13018 1463 aa18.73■□□□□ 0.59
APP-205ENST00000358918 RTEL1-TNFRSF6BF6WH68 1400 aa18.73■□□□□ 0.59
APP-205ENST00000358918 ZFYVE16Q7Z3T8 1539 aa18.73■□□□□ 0.59
APP-205ENST00000358918 C8orf34Q49A92 452 aa18.73■□□□□ 0.59
APP-205ENST00000358918 ADGRL1O94910 1474 aa18.72■□□□□ 0.59
APP-205ENST00000358918 RGL3Q3MIN7 710 aa18.72■□□□□ 0.59
APP-205ENST00000358918 SCAPERQ9BY12 1400 aa18.72■□□□□ 0.59
APP-205ENST00000358918 MAGI2Q86UL8 1455 aa18.72■□□□□ 0.59
APP-205ENST00000358918 C20orf194Q5TEA3 1177 aa18.71■□□□□ 0.59
APP-205ENST00000358918 ATP7AQ04656 1500 aa18.67■□□□□ 0.58
APP-205ENST00000358918 INO80Q9ULG1 1556 aaPredicted RBP18.64■□□□□ 0.58
APP-205ENST00000358918 PER1O15534 1290 aaPredicted RBP18.64■□□□□ 0.57
APP-205ENST00000358918 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.64■□□□□ 0.57
APP-205ENST00000358918 KIF3BO15066 747 aa18.63■□□□□ 0.57
APP-205ENST00000358918 CC2D1BQ5T0F9 858 aaKnown RBP18.62■□□□□ 0.57
APP-205ENST00000358918 CD109Q6YHK3 1445 aa18.62■□□□□ 0.57
APP-205ENST00000358918 A2MP01023 1474 aa18.62■□□□□ 0.57
APP-205ENST00000358918 RGS3P49796 1198 aa18.62■□□□□ 0.57
APP-205ENST00000358918 ATP10AO60312 1499 aa18.61■□□□□ 0.57
APP-205ENST00000358918 PRAG1Q86YV5 1406 aa18.61■□□□□ 0.57
APP-205ENST00000358918 L1TD1Q5T7N2 865 aaKnown RBP18.59■□□□□ 0.57
APP-205ENST00000358918 NBPF1Q3BBV0 1214 aa18.58■□□□□ 0.56
APP-205ENST00000358918 KANK1Q14678 1352 aa18.57■□□□□ 0.56
APP-205ENST00000358918 DEPDC5O75140 1603 aa18.57■□□□□ 0.56
APP-205ENST00000358918 DUSP27Q5VZP5 1158 aa18.57■□□□□ 0.56
APP-205ENST00000358918 POGKQ9P215 609 aa18.56■□□□□ 0.56
APP-205ENST00000358918 ZNF518AQ6AHZ1 1483 aa18.56■□□□□ 0.56
APP-205ENST00000358918 COL17A1Q9UMD9 1497 aaPredicted RBP18.56■□□□□ 0.56
APP-205ENST00000358918 TRPM1Q7Z4N2 1603 aa18.55■□□□□ 0.56
APP-205ENST00000358918 BECN1Q14457 450 aa18.55■□□□□ 0.56
APP-205ENST00000358918 KIDINS220Q9ULH0 1771 aa18.55■□□□□ 0.56
APP-205ENST00000358918 CYB5RLQ6IPT4 315 aa18.54■□□□□ 0.56
APP-205ENST00000358918 RRAGDQ9NQL2 400 aaPredicted RBP18.54■□□□□ 0.56
APP-205ENST00000358918 ADAMTS8Q9UP79 889 aa18.54■□□□□ 0.56
APP-205ENST00000358918 PANK3Q9H999 370 aa18.54■□□□□ 0.56
APP-205ENST00000358918 GOLGA2Q08379 1002 aa18.53■□□□□ 0.56
APP-205ENST00000358918 GLIPR1L2Q4G1C9 344 aa18.53■□□□□ 0.56
APP-205ENST00000358918 EIF3AQ14152 1382 aaKnown RBP18.52■□□□□ 0.56
APP-205ENST00000358918 PLEKHH1Q9ULM0 1364 aa18.52■□□□□ 0.56
APP-205ENST00000358918 POGZQ7Z3K3 1410 aa18.52■□□□□ 0.55
APP-205ENST00000358918 WDR43Q15061 677 aaKnown RBP eCLIP18.52■□□□□ 0.55
APP-205ENST00000358918 TET3O43151 1660 aa18.52■□□□□ 0.55
APP-205ENST00000358918 VWDEQ8N2E2 1590 aa18.51■□□□□ 0.55
APP-205ENST00000358918 TRPM2O94759 1503 aa18.51■□□□□ 0.55
APP-205ENST00000358918 CFAP74Q9C0B2 1584 aa18.51■□□□□ 0.55
APP-205ENST00000358918 EIF2AK4Q9P2K8 1649 aaKnown RBP18.51■□□□□ 0.55
APP-205ENST00000358918 PTPRTO14522 1441 aa18.51■□□□□ 0.55
APP-205ENST00000358918 DISP3Q9P2K9 1392 aa18.5■□□□□ 0.55
APP-205ENST00000358918 MROH1Q8NDA8 1641 aa18.5■□□□□ 0.55
APP-205ENST00000358918 USP19O94966 1318 aa18.5■□□□□ 0.55
APP-205ENST00000358918 SPHKAPQ2M3C7 1700 aa18.5■□□□□ 0.55
APP-205ENST00000358918 PRDM15P57071 1507 aaPredicted RBP18.49■□□□□ 0.55
APP-205ENST00000358918 ZNF521Q96K83 1311 aa18.49■□□□□ 0.55
APP-205ENST00000358918 GPRASP1Q5JY77 1395 aa18.49■□□□□ 0.55
APP-205ENST00000358918 CLTCL1P53675 1640 aa18.48■□□□□ 0.55
APP-205ENST00000358918 RAPGEF3O95398 923 aa18.48■□□□□ 0.55
APP-205ENST00000358918 TESK2Q96S53 571 aa18.47■□□□□ 0.55
APP-205ENST00000358918 SLKQ9H2G2 1235 aaPredicted RBP18.47■□□□□ 0.55
APP-205ENST00000358918 MAPK8IP3Q9UPT6 1336 aa18.46■□□□□ 0.55
APP-205ENST00000358918 TMF1P82094 1093 aa18.46■□□□□ 0.55
APP-205ENST00000358918 SLFN5Q08AF3 891 aa18.46■□□□□ 0.55
APP-205ENST00000358918 PKNOX2Q96KN3 472 aa18.46■□□□□ 0.55
APP-205ENST00000358918 MLH3Q9UHC1 1453 aa18.45■□□□□ 0.54
APP-205ENST00000358918 GGT6Q6P531 493 aa18.45■□□□□ 0.54
APP-205ENST00000358918 CEP152O94986 1710 aa18.44■□□□□ 0.54
APP-205ENST00000358918 LAMC1P11047 1609 aa18.44■□□□□ 0.54
APP-205ENST00000358918 HECW2Q9P2P5 1572 aa18.44■□□□□ 0.54
APP-205ENST00000358918 VIRMAQ69YN4 1812 aaKnown RBP18.43■□□□□ 0.54
APP-205ENST00000358918 NEO1Q92859 1461 aa18.43■□□□□ 0.54
APP-205ENST00000358918 PPP2R1AP30153 589 aa18.42■□□□□ 0.54
APP-205ENST00000358918 NAP1L5Q96NT1 182 aaPredicted RBP18.42■□□□□ 0.54
APP-205ENST00000358918 UGGT1Q9NYU2 1555 aa18.42■□□□□ 0.54
APP-205ENST00000358918 GOLGA6L3A6NEY3 463 aa18.42■□□□□ 0.54
APP-205ENST00000358918 PNNQ9H307 717 aaKnown RBP18.42■□□□□ 0.54
APP-205ENST00000358918 FRMPD1Q5SYB0 1578 aa18.42■□□□□ 0.54
APP-205ENST00000358918 SEC24BO95487 1268 aa18.41■□□□□ 0.54
APP-205ENST00000358918 IGHDP01880 384 aa18.41■□□□□ 0.54
APP-205ENST00000358918 ANTXR1Q9H6X2 564 aa18.41■□□□□ 0.54
APP-205ENST00000358918 EFCAB6Q5THR3 1501 aa18.41■□□□□ 0.54
APP-205ENST00000358918 NKTRP30414 1462 aaKnown RBP18.41■□□□□ 0.54
APP-205ENST00000358918 TRMT2AQ8IZ69 625 aaKnown RBP18.4■□□□□ 0.54
APP-205ENST00000358918 UPF2Q9HAU5 1272 aaKnown RBP18.4■□□□□ 0.54
APP-205ENST00000358918 PPRC1Q5VV67 1664 aaKnown RBP18.4■□□□□ 0.54
APP-205ENST00000358918 CGNL1Q0VF96 1302 aa18.4■□□□□ 0.54
APP-205ENST00000358918 RIMBP3CA6NJZ7 1639 aa18.4■□□□□ 0.54
APP-205ENST00000358918 RIMBP3BA6NNM3 1639 aa18.4■□□□□ 0.54
APP-205ENST00000358918 MADDQ8WXG6 1647 aa18.4■□□□□ 0.54
APP-205ENST00000358918 RIMBP3Q9UFD9 1639 aa18.4■□□□□ 0.54
APP-205ENST00000358918 KNSTRNQ9Y448 316 aa18.4■□□□□ 0.54
APP-205ENST00000358918 ABCA6Q8N139 1617 aa18.39■□□□□ 0.54
APP-205ENST00000358918 RNF17Q9BXT8 1623 aaKnown RBP18.39■□□□□ 0.53
APP-205ENST00000358918 BCAR3O75815 825 aa18.38■□□□□ 0.53
APP-205ENST00000358918 XRCC6P12956 609 aaKnown RBP eCLIP18.38■□□□□ 0.53
APP-205ENST00000358918 CLCN1P35523 988 aa18.38■□□□□ 0.53
APP-205ENST00000358918 NLRP1Q9C000 1473 aa18.38■□□□□ 0.53
APP-205ENST00000358918 LMTK2Q8IWU2 1503 aa18.37■□□□□ 0.53
APP-205ENST00000358918 ARXQ96QS3 562 aa18.37■□□□□ 0.53
APP-205ENST00000358918 FSD2A1L4K1 749 aa18.37■□□□□ 0.53
APP-205ENST00000358918 HSP90AA1P07900 732 aaKnown RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 333 ms